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SMARCD1 and PRMT6
Number of citations of the paper that reports this interaction (PubMedID
23455924
)
0
Data Source:
BioGRID
(two hybrid)
SMARCD1
PRMT6
Description
SWI/SNF related BAF chromatin remodeling complex subunit D1
protein arginine methyltransferase 6
Image
GO Annotations
Cellular Component
Kinetochore
Chromatin
Nucleus
Nucleoplasm
Nuclear Matrix
SWI/SNF Complex
RSC-type Complex
Brahma Complex
NpBAF Complex
NBAF Complex
GBAF Complex
Nucleus
Nucleoplasm
Nucleolus
Molecular Function
Chromatin Binding
Transcription Coregulator Activity
Transcription Coactivator Activity
Signaling Receptor Binding
Protein Binding
Molecular Adaptor Activity
Chromatin Binding
Protein Binding
Methyltransferase Activity
Histone Arginine N-methyltransferase Activity
Protein-arginine N-methyltransferase Activity
Transferase Activity
Protein-arginine Omega-N Monomethyltransferase Activity
Protein-arginine Omega-N Asymmetric Methyltransferase Activity
Histone Methyltransferase Activity
Histone Binding
Histone H4R3 Methyltransferase Activity
Histone H3R2 Methyltransferase Activity
Histone H2AR3 Methyltransferase Activity
Histone H3 Methyltransferase Activity
Biological Process
Chromatin Organization
Nucleosome Disassembly
Chromatin Remodeling
Regulation Of Transcription By RNA Polymerase II
Nervous System Development
Positive Regulation Of Cell Population Proliferation
Regulation Of Mitotic Metaphase/anaphase Transition
Positive Regulation Of T Cell Differentiation
Negative Regulation Of Cell Differentiation
Positive Regulation Of Cell Differentiation
Positive Regulation Of Myoblast Differentiation
Transcription Initiation-coupled Chromatin Remodeling
Positive Regulation Of DNA-templated Transcription
Regulation Of G0 To G1 Transition
Cellular Response To Fatty Acid
Positive Regulation Of Stem Cell Population Maintenance
Regulation Of G1/S Transition Of Mitotic Cell Cycle
Positive Regulation Of Double-strand Break Repair
Regulation Of Nucleotide-excision Repair
Negative Regulation Of Transcription By RNA Polymerase II
DNA Repair
Base-excision Repair
Chromatin Organization
Chromatin Remodeling
Regulation Of DNA-templated Transcription
DNA Damage Response
Regulation Of Mitochondrion Organization
Methylation
Cellular Response To Stress
Regulation Of Megakaryocyte Differentiation
Negative Regulation Of DNA-templated Transcription
Cellular Senescence
Regulation Of Signal Transduction By P53 Class Mediator
Negative Regulation Of Ubiquitin-dependent Protein Catabolic Process
Pathways
RMTs methylate histone arginines
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known
Regulation of MITF-M-dependent genes involved in pigmentation
Regulation of MITF-M-dependent genes involved in pigmentation
Regulation of endogenous retroelements by Piwi-interacting RNAs (piRNAs)
Formation of the canonical BAF (cBAF) complex
Formation of the polybromo-BAF (pBAF) complex
Formation of the embryonic stem cell BAF (esBAF) complex
Formation of the non-canonical BAF (ncBAF) complex
Formation of neuronal progenitor and neuronal BAF (npBAF and nBAF)
Formation of neuronal progenitor and neuronal BAF (npBAF and nBAF)
RMTs methylate histone arginines
RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function
Drugs
Diseases
GWAS
Body fat distribution (arm fat ratio) (
30664634
)
Body fat distribution (leg fat ratio) (
30664634
)
Body fat distribution (trunk fat ratio) (
30664634
)
Adult body size (
32376654
)
Blood pressure measurement (low sodium intervention) (
24165912
)
Intelligence (
22449649
)
Liver enzyme levels (gamma-glutamyl transferase) (
33972514
)
Low density lipoprotein cholesterol levels (
32154731
)
Non-obstructive azoospermia (
22197933
)
Obesity (early onset extreme) (
23563609
)
Refractive error (
32231278
)
Response to SSRI in MDD or openness (
29559929
)
Restless legs syndrome (
29029846
)
Sex hormone-binding globulin levels (
22829776
)
Waist circumference (
28552196
)
Weight (
28552196
)
Interacting Genes
156 interacting genes:
ABI1
ABI2
ABI3
ACTMAP
ADAT2
AIRIM
ANKRD23
ANKRD49
ANKS1A
ANP32B
APOA5
AR
ARMC10
ARRDC3
BCAS2
BEND5
BEX3
BLOC1S5
BRWD1
C4BPA
CALCOCO2
CCDC102B
CCDC197
CCDC33
CCDC85B
CDC5L
CDR2
CDSN
CDX2
CEACAM6
CFTR
CHFR
CHN2
CLNK
COG6
COL1A2
CORO1A
CUEDC1
CYSRT1
DCTN2
DISC1
EGFL7
EIF4G1
ESR1
ESS2
FAM136A
FAM161A
FBXO7
FEZ1
FOS
FUS
GATA1
GCC1
GIGYF1
GINS3
GOLGA6L9
GPRASP3
GRAMD4
HES6
HNRNPC
HOMEZ
HOXD3
HSF2BP
HSPB1
IGKC
IKBIP
IKZF3
INSC
IQCB1
JUN
KATNBL1
KDM1A
KEAP1
KIAA0753
KLF1
KMT5B
KRT15
KRT16
KRT18
KRT27
KRT31
KRT34
KRT37
KRT38
KRT75
LDB2
LDOC1
LZTS2
MAGEA2
MAGEA2B
MAGEA6
MED4
MKRN3
MTNR1B
MTUS2
NAB2
NECAB2
NELFA
NME1
NONO
NR1H4
NR3C1
NUCB2
NUDT16L1
NUTM1
OGT
PACSIN3
PAICS
PBX4
PCBD1
PGR
PICK1
PIH1D1
PKNOX2
PLAGL2
PPM1J
PRDX1
PRMT6
PSTPIP1
RIF1
RORB
RPS29
SCARA5
SCHIP1
SCNM1
SERTAD3
SHISA6
SMUG1
SNF8
SPSB2
STH
STMN3
SYCE1L
TCP10L
THOC7
TLE5
TNIP2
TP53
TRIM27
TRIM54
TRIM72
USHBP1
USP54
VPS37B
WASHC1
YJU2B
YWHAG
ZC2HC1C
ZMAT5
ZMYND12
ZNF417
ZNF438
ZNF511
ZNF629
ZNF655
ZNF69
90 interacting genes:
AK8
AP1G2
ASB3
AUNIP
BCAT1
BLZF1
BMP3
C8orf74
CDCA4
CETN2
DCAF16
DNAJA3
DNALI1
DXO
FBL
FIP1L1
FKBP7
FYCO1
FYN
GBE1
GPS2
GRHL3
GSTCD
GTPBP2
H2AC18
H2BC21
H3-5
H3C14
H3C15
H4C16
H4C6
HESX1
HMGA1
HMGA2
HNRNPH2
HOXA1
HOXA5
HOXC4
ID2
KIAA0408
KIF9
KLHL20
LDHAL6B
LENG8
LINC02875
LOXL4
MALT1
MED28
METTL27
MLC1
MNDA
MTF2
NEFL
NOSTRIN
NR1D2
OAS1
OPA3
PABPC1
PCGF5
PELO
PEX7
PSMD11
PYCR3
PYGO1
RAC1
RAD17
RASSF2
SERGEF
SLU7
SMAD9
SMARCD1
SNF8
SPATA22
SPIN1
SPSB1
SRGAP3
SSX2IP
STARD10
SUV39H1
TDO2
TEX35
THEMIS
TMED5
TRIB2
TSC1
UBXN10
WDFY3
ZNF436
ZNF557
ZSCAN9
Entrez ID
6602
55170
HPRD ID
03438
10505
Ensembl ID
ENSG00000066117
ENSG00000198890
Uniprot IDs
Q96GM5
Q96LA8
PDB IDs
6LTH
6LTJ
7VDV
7Y8R
4HC4
4QPP
4QQK
4Y2H
4Y30
5E8R
5EGS
5HZM
5WCF
6P7I
6W6D
6WAD
7NR4
Enriched GO Terms of Interacting Partners
?
Protein Binding
Identical Protein Binding
Structural Constituent Of Skin Epidermis
Intermediate Filament Cytoskeleton Organization
Keratin Filament
Intermediate Filament-based Process
Nucleus
Intermediate Filament Organization
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Estrogen Response Element Binding
Supramolecular Fiber Organization
Cytoskeleton
Negative Regulation Of RNA Metabolic Process
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of RNA Biosynthetic Process
Regulation Of Primary Metabolic Process
Regulation Of Transcription By RNA Polymerase II
Regulation Of RNA Metabolic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Nuclear Receptor Activity
DNA-binding Transcription Factor Activity
Intermediate Filament
Regulation Of Actin Nucleation
Regulation Of Nucleobase-containing Compound Metabolic Process
Developmental Process
DNA-binding Transcription Activator Activity, RNA Polymerase II-specific
Structural Molecule Activity
Actin-based Cell Projection
Positive Regulation Of Macromolecule Metabolic Process
Positive Regulation Of Metabolic Process
Regulation Of MiRNA Transcription
RNA Polymerase II-specific DNA-binding Transcription Factor Binding
Sequence-specific DNA Binding
Positive Regulation Of RNA Biosynthetic Process
Positive Regulation Of DNA-templated Transcription
Transcription Coactivator Binding
RNA Polymerase II Transcription Regulatory Region Sequence-specific DNA Binding
Steroid Binding
SCAR Complex
Positive Regulation Of MiRNA Transcription
Cornified Envelope
Regulation Of MiRNA Metabolic Process
Positive Regulation Of RNA Metabolic Process
Negative Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of Ubiquitin-protein Transferase Activity
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
Tertiary Branching Involved In Mammary Gland Duct Morphogenesis
Protein Kinase C Inhibitor Activity
Cytoskeleton Organization
Nucleus
Structural Constituent Of Chromatin
Protein Binding
Nucleosome
Nucleoplasm
Chromatin Organization
Nucleosome Organization
Chromatin Remodeling
Chromosome
Senescence-associated Heterochromatin Focus
Tagcloud
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Tagcloud (Difference)
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Tagcloud (Intersection)
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