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SMARCD1 and NUCB2
Number of citations of the paper that reports this interaction (PubMedID
21988832
)
38
Data Source:
BioGRID
(two hybrid)
SMARCD1
NUCB2
Description
SWI/SNF related BAF chromatin remodeling complex subunit D1
nucleobindin 2
Image
No pdb structure
GO Annotations
Cellular Component
Kinetochore
Chromatin
Nucleus
Nucleoplasm
Nuclear Matrix
SWI/SNF Complex
RSC-type Complex
Brahma Complex
NpBAF Complex
NBAF Complex
GBAF Complex
Extracellular Region
Extracellular Space
Nucleus
Nuclear Envelope
Nuclear Outer Membrane
Cytoplasm
Endoplasmic Reticulum
Endoplasmic Reticulum-Golgi Intermediate Compartment
Golgi Apparatus
Cytosol
Plasma Membrane
Endomembrane System
Membrane
Extracellular Exosome
Molecular Function
Chromatin Binding
Transcription Coregulator Activity
Transcription Coactivator Activity
Signaling Receptor Binding
Protein Binding
Molecular Adaptor Activity
G-protein Alpha-subunit Binding
DNA Binding
Guanyl-nucleotide Exchange Factor Activity
Calcium Ion Binding
Protein Binding
Metal Ion Binding
Biological Process
Chromatin Organization
Nucleosome Disassembly
Chromatin Remodeling
Regulation Of Transcription By RNA Polymerase II
Nervous System Development
Positive Regulation Of Cell Population Proliferation
Regulation Of Mitotic Metaphase/anaphase Transition
Positive Regulation Of T Cell Differentiation
Negative Regulation Of Cell Differentiation
Positive Regulation Of Cell Differentiation
Positive Regulation Of Myoblast Differentiation
Transcription Initiation-coupled Chromatin Remodeling
Positive Regulation Of DNA-templated Transcription
Regulation Of G0 To G1 Transition
Cellular Response To Fatty Acid
Positive Regulation Of Stem Cell Population Maintenance
Regulation Of G1/S Transition Of Mitotic Cell Cycle
Positive Regulation Of Double-strand Break Repair
Regulation Of Nucleotide-excision Repair
Small GTPase-mediated Signal Transduction
Pathways
RMTs methylate histone arginines
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known
Regulation of MITF-M-dependent genes involved in pigmentation
Regulation of MITF-M-dependent genes involved in pigmentation
Regulation of endogenous retroelements by Piwi-interacting RNAs (piRNAs)
Formation of the canonical BAF (cBAF) complex
Formation of the polybromo-BAF (pBAF) complex
Formation of the embryonic stem cell BAF (esBAF) complex
Formation of the non-canonical BAF (ncBAF) complex
Formation of neuronal progenitor and neuronal BAF (npBAF and nBAF)
Formation of neuronal progenitor and neuronal BAF (npBAF and nBAF)
Drugs
Calcium citrate
Calcium Phosphate
Calcium phosphate dihydrate
Diseases
GWAS
Body fat distribution (arm fat ratio) (
30664634
)
Body fat distribution (leg fat ratio) (
30664634
)
Body fat distribution (trunk fat ratio) (
30664634
)
Body mass index (
26426971
)
Height (
20881960
)
Mean platelet volume (
32888494
)
Pulse pressure (
27841878
)
Systolic blood pressure (
27841878
28739976
)
Waist circumference adjusted for BMI (joint analysis main effects and physical activity interaction) (
28448500
)
Waist circumference adjusted for BMI in active individuals (
28448500
)
Waist circumference adjusted for body mass index (
28448500
34021172
)
Youthful appearance (self-reported) (
32339537
)
Interacting Genes
156 interacting genes:
ABI1
ABI2
ABI3
ACTMAP
ADAT2
AIRIM
ANKRD23
ANKRD49
ANKS1A
ANP32B
APOA5
AR
ARMC10
ARRDC3
BCAS2
BEND5
BEX3
BLOC1S5
BRWD1
C4BPA
CALCOCO2
CCDC102B
CCDC197
CCDC33
CCDC85B
CDC5L
CDR2
CDSN
CDX2
CEACAM6
CFTR
CHFR
CHN2
CLNK
COG6
COL1A2
CORO1A
CUEDC1
CYSRT1
DCTN2
DISC1
EGFL7
EIF4G1
ESR1
ESS2
FAM136A
FAM161A
FBXO7
FEZ1
FOS
FUS
GATA1
GCC1
GIGYF1
GINS3
GOLGA6L9
GPRASP3
GRAMD4
HES6
HNRNPC
HOMEZ
HOXD3
HSF2BP
HSPB1
IGKC
IKBIP
IKZF3
INSC
IQCB1
JUN
KATNBL1
KDM1A
KEAP1
KIAA0753
KLF1
KMT5B
KRT15
KRT16
KRT18
KRT27
KRT31
KRT34
KRT37
KRT38
KRT75
LDB2
LDOC1
LZTS2
MAGEA2
MAGEA2B
MAGEA6
MED4
MKRN3
MTNR1B
MTUS2
NAB2
NECAB2
NELFA
NME1
NONO
NR1H4
NR3C1
NUCB2
NUDT16L1
NUTM1
OGT
PACSIN3
PAICS
PBX4
PCBD1
PGR
PICK1
PIH1D1
PKNOX2
PLAGL2
PPM1J
PRDX1
PRMT6
PSTPIP1
RIF1
RORB
RPS29
SCARA5
SCHIP1
SCNM1
SERTAD3
SHISA6
SMUG1
SNF8
SPSB2
STH
STMN3
SYCE1L
TCP10L
THOC7
TLE5
TNIP2
TP53
TRIM27
TRIM54
TRIM72
USHBP1
USP54
VPS37B
WASHC1
YJU2B
YWHAG
ZC2HC1C
ZMAT5
ZMYND12
ZNF417
ZNF438
ZNF511
ZNF629
ZNF655
ZNF69
12 interacting genes:
ARL13B
ASPH
FFAR2
GADD45A
GNAI3
GNAS
NDN
NR1I2
SLC7A1
SMARCD1
STAR
XPO1
Entrez ID
6602
4925
HPRD ID
03438
09726
Ensembl ID
ENSG00000066117
ENSG00000070081
Uniprot IDs
Q96GM5
P80303
Q2L696
PDB IDs
6LTH
6LTJ
7VDV
7Y8R
Enriched GO Terms of Interacting Partners
?
Protein Binding
Identical Protein Binding
Structural Constituent Of Skin Epidermis
Intermediate Filament Cytoskeleton Organization
Keratin Filament
Intermediate Filament-based Process
Nucleus
Intermediate Filament Organization
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Estrogen Response Element Binding
Supramolecular Fiber Organization
Cytoskeleton
Negative Regulation Of RNA Metabolic Process
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of RNA Biosynthetic Process
Regulation Of Primary Metabolic Process
Regulation Of Transcription By RNA Polymerase II
Regulation Of RNA Metabolic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Nuclear Receptor Activity
DNA-binding Transcription Factor Activity
Intermediate Filament
Regulation Of Actin Nucleation
Regulation Of Nucleobase-containing Compound Metabolic Process
Developmental Process
DNA-binding Transcription Activator Activity, RNA Polymerase II-specific
Structural Molecule Activity
Actin-based Cell Projection
Positive Regulation Of Macromolecule Metabolic Process
Positive Regulation Of Metabolic Process
Regulation Of MiRNA Transcription
RNA Polymerase II-specific DNA-binding Transcription Factor Binding
Sequence-specific DNA Binding
Positive Regulation Of RNA Biosynthetic Process
Positive Regulation Of DNA-templated Transcription
Transcription Coactivator Binding
RNA Polymerase II Transcription Regulatory Region Sequence-specific DNA Binding
Steroid Binding
SCAR Complex
Positive Regulation Of MiRNA Transcription
Cornified Envelope
Regulation Of MiRNA Metabolic Process
Positive Regulation Of RNA Metabolic Process
Negative Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of Ubiquitin-protein Transferase Activity
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
Tertiary Branching Involved In Mammary Gland Duct Morphogenesis
Protein Kinase C Inhibitor Activity
Cytoskeleton Organization
Positive Regulation Of Metabolic Process
Regulation Of Metabolic Process
Guanyl Nucleotide Binding
G-protein Beta/gamma-subunit Complex Binding
Regulation Of Protein Transport
Heterotrimeric G-protein Complex
Negative Regulation Of Inflammatory Response To Antigenic Stimulus
Cellular Response To Lipid
Cellular Response To Fatty Acid
Regulation Of Establishment Of Protein Localization
Negative Regulation Of Peptidyl-serine Phosphorylation Of STAT Protein
Negative Regulation Of Nerve Growth Factor Production
Dibasic Protein Processing
Zymogen Inhibition
Regulation Of Multicellular Organismal Process
Peptidyl-aspartic Acid 3-dioxygenase Activity
Promoter-specific Chromatin Binding
Mu-type Opioid Receptor Binding
Positive Regulation Of Acute Inflammatory Response To Non-antigenic Stimulus
Response To Fatty Acid
Golgi Apparatus Subcompartment
Regulation Of Nerve Growth Factor Production
Negative Regulation Of Low-density Lipoprotein Particle Receptor Catabolic Process
Nerve Growth Factor Production
Negative Regulation Of Neurotrophin Production
Lysine Transport
L-histidine Import Across Plasma Membrane
Cellular Response To Triglyceride
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Tagcloud (Difference)
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Tagcloud (Intersection)
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