SMARCD1 and RPS29

Number of citations of the paper that reports this interaction (PMID 21988832)
14

Data Source:
BioGRID (two hybrid)

		SMARCD1	RPS29
Gene Name		SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	ribosomal protein S29
Image		No pdb structure
Gene Ontology Annotations	Cellular Component	SWI/SNF Complex NpBAF Complex NBAF Complex	Cytoplasm Cytosol Focal Adhesion Small Ribosomal Subunit Cytosolic Small Ribosomal Subunit Extracellular Vesicular Exosome
	Molecular Function	Transcription Coactivator Activity Protein Binding Protein Complex Scaffold	Structural Constituent Of Ribosome Zinc Ion Binding
	Biological Process	Nucleosome Disassembly Chromatin Remodeling Regulation Of Transcription From RNA Polymerase II Promoter Nervous System Development Chromatin-mediated Maintenance Of Transcription	Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay Translation Translational Initiation Translational Elongation Translational Termination SRP-dependent Cotranslational Protein Targeting To Membrane Gene Expression Viral Process Viral Life Cycle Viral Transcription Cellular Protein Metabolic Process
Pathways		Chromatin modifying enzymes Chromatin organization RMTs methylate histone arginines	Nonsense-Mediated Decay (NMD) Translation initiation complex formation Translation SRP-dependent cotranslational protein targeting to membrane Eukaryotic Translation Termination Peptide chain elongation Influenza Infection Viral mRNA Translation L13a-mediated translational silencing of Ceruloplasmin expression Influenza Life Cycle Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) Ribosomal scanning and start codon recognition Formation of the ternary complex, and subsequently, the 43S complex Influenza Viral RNA Transcription and Replication GTP hydrolysis and joining of the 60S ribosomal subunit Eukaryotic Translation Initiation Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S Formation of a pool of free 40S subunits Eukaryotic Translation Elongation Cap-dependent Translation Initiation Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Drugs
Diseases
GWAS			Post-traumatic stress disorder (asjusted for relatedness) ( 23726511) Visceral adipose tissue/subcutaneous adipose tissue ratio ( 22589738) Visceral fat ( 22589738)
Protein-Protein Interactions		44 interactors: ANP32B APOA5 AR C4BPA CALCOCO2 CCDC85B CDC5L CDX2 CORO1A DPF3 EGFL7 ESR1 FEZ1 FOS GATA1 GCC1 HNRNPC HSPB1 IGKC JUN KDM1A KLF1 KRT15 KRT18 LDOC1 MED4 NME1 NONO NR1H4 NR3C1 NUCB2 PAICS PCBD1 PGR PRDX1 PRMT6 RIF1 RPS29 SUV420H1 TNIP2 TP53 USHBP1 VPS37B YWHAG	4 interactors: ADH6 CTBP2 SMARCD1 UMPS
Entrez ID		6602	6235
HPRD ID		03438	04698
Ensembl ID		ENSG00000066117	ENSG00000213741
Uniprot IDs		Q96GM5	P62273
PDB IDs			2ZKQ 3J3A
Enriched GO Terms of Interacting Partners?		RNA Biosynthetic Process Gene Expression Transcription, DNA-templated RNA Metabolic Process Nucleobase-containing Compound Metabolic Process Cellular Nitrogen Compound Metabolic Process Cellular Macromolecule Biosynthetic Process Positive Regulation Of Cellular Biosynthetic Process Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Macromolecule Biosynthetic Process Biosynthetic Process Regulation Of Apoptotic Process Positive Regulation Of Macromolecule Biosynthetic Process Nitrogen Compound Metabolic Process Regulation Of Cell Death Positive Regulation Of Transcription, DNA-templated Positive Regulation Of Gene Expression Chromatin Organization Regulation Of Gene Expression Cellular Response To Organic Substance Response To Organic Substance Developmental Process Regulation Of Transcription, DNA-templated Regulation Of Nucleic Acid-templated Transcription Positive Regulation Of Cellular Metabolic Process Regulation Of RNA Biosynthetic Process Regulation Of Metabolic Process Intracellular Steroid Hormone Receptor Signaling Pathway Regulation Of RNA Metabolic Process Anatomical Structure Development Transcription From RNA Polymerase II Promoter System Development Negative Regulation Of Apoptotic Process Negative Regulation Of Programmed Cell Death Transcription Initiation From RNA Polymerase II Promoter Steroid Hormone Mediated Signaling Pathway Negative Regulation Of Cell Death Chromosome Organization Positive Regulation Of Transcription From RNA Polymerase II Promoter Regulation Of Nitrogen Compound Metabolic Process Intracellular Receptor Signaling Pathway Positive Regulation Of Metabolic Process Multicellular Organismal Development DNA-templated Transcription, Initiation Hormone-mediated Signaling Pathway Regulation Of Cell Proliferation Cellular Response To Hormone Stimulus Regulation Of Cellular Process Chromatin Modification	'de Novo' UMP Biosynthetic Process Positive Regulation Of Retinoic Acid Receptor Signaling Pathway Positive Regulation Of Chromatin Binding 'de Novo' Pyrimidine Nucleobase Biosynthetic Process Chromatin-mediated Maintenance Of Transcription UMP Biosynthetic Process Ethanol Oxidation Nucleosome Disassembly White Fat Cell Differentiation Positive Regulation Of Gene Expression, Epigenetic Viral Genome Replication Pyrimidine Nucleobase Metabolic Process
Tagcloud ?			26s a2 carcinogenesis consistently cytochromosome detecting differentially dot dysplasia est etc expressions ferritin fragments gastric hybridization hypothetical mucosa oxidase proteasome rps12 screen semi ssh stages subtractive tags transcriptase verifying
Tagcloud (Difference) ?			26s a2 carcinogenesis consistently cytochromosome detecting differentially dot dysplasia est etc expressions ferritin fragments gastric hybridization hypothetical mucosa oxidase proteasome rps12 screen semi ssh stages subtractive tags transcriptase verifying
Tagcloud (Intersection) ?