SMARCD1 and CDX2

Number of citations of the paper that reports this interaction (PMID 19371634)
11

Data Source:
BioGRID (pull down)

		SMARCD1	CDX2
Gene Name		SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	caudal type homeobox 2
Image		No pdb structure	No pdb structure
Gene Ontology Annotations	Cellular Component	SWI/SNF Complex NpBAF Complex NBAF Complex	Condensed Nuclear Chromosome Nucleoplasm Transcriptional Repressor Complex
	Molecular Function	Transcription Coactivator Activity Protein Binding Protein Complex Scaffold	RNA Polymerase II Distal Enhancer Sequence-specific DNA Binding RNA Polymerase II Transcription Regulatory Region Sequence-specific DNA Binding Transcription Factor Activity Involved In Negative Regulation Of Transcription Double-stranded DNA Binding Sequence-specific DNA Binding Transcription Factor Activity Transcription Corepressor Activity
	Biological Process	Nucleosome Disassembly Chromatin Remodeling Regulation Of Transcription From RNA Polymerase II Promoter Nervous System Development Chromatin-mediated Maintenance Of Transcription	Negative Regulation Of Transcription From RNA Polymerase II Promoter Blood Vessel Development Trophectodermal Cell Differentiation Transcription From RNA Polymerase II Promoter Positive Regulation Of Cell Proliferation Endosome To Lysosome Transport Organ Morphogenesis Anterior/posterior Pattern Specification Somatic Stem Cell Maintenance Establishment Or Maintenance Of Epithelial Cell Apical/basal Polarity Positive Regulation Of Cell Differentiation Positive Regulation Of Transcription, DNA-templated Labyrinthine Layer Development
Pathways		Chromatin modifying enzymes Chromatin organization RMTs methylate histone arginines	Peptide hormone metabolism Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1) Incretin synthesis, secretion, and inactivation
Drugs
Diseases
GWAS
Protein-Protein Interactions		44 interactors: ANP32B APOA5 AR C4BPA CALCOCO2 CCDC85B CDC5L CDX2 CORO1A DPF3 EGFL7 ESR1 FEZ1 FOS GATA1 GCC1 HNRNPC HSPB1 IGKC JUN KDM1A KLF1 KRT15 KRT18 LDOC1 MED4 NME1 NONO NR1H4 NR3C1 NUCB2 PAICS PCBD1 PGR PRDX1 PRMT6 RIF1 RPS29 SUV420H1 TNIP2 TP53 USHBP1 VPS37B YWHAG	13 interactors: ACAT2 CDK2 CREBBP EP300 GSK3B HNF1A MAPK1 MAPK14 PAX6 SMARCA4 SMARCB1 SMARCD1 UBB
Entrez ID		6602	1045
HPRD ID		03438	02622
Ensembl ID		ENSG00000066117
Uniprot IDs		Q96GM5	Q99626
PDB IDs
Enriched GO Terms of Interacting Partners?		RNA Biosynthetic Process Gene Expression Transcription, DNA-templated RNA Metabolic Process Nucleobase-containing Compound Metabolic Process Cellular Nitrogen Compound Metabolic Process Cellular Macromolecule Biosynthetic Process Positive Regulation Of Cellular Biosynthetic Process Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Macromolecule Biosynthetic Process Biosynthetic Process Regulation Of Apoptotic Process Positive Regulation Of Macromolecule Biosynthetic Process Nitrogen Compound Metabolic Process Regulation Of Cell Death Positive Regulation Of Transcription, DNA-templated Positive Regulation Of Gene Expression Chromatin Organization Regulation Of Gene Expression Cellular Response To Organic Substance Response To Organic Substance Developmental Process Regulation Of Transcription, DNA-templated Regulation Of Nucleic Acid-templated Transcription Positive Regulation Of Cellular Metabolic Process Regulation Of RNA Biosynthetic Process Regulation Of Metabolic Process Intracellular Steroid Hormone Receptor Signaling Pathway Regulation Of RNA Metabolic Process Anatomical Structure Development Transcription From RNA Polymerase II Promoter System Development Negative Regulation Of Apoptotic Process Negative Regulation Of Programmed Cell Death Transcription Initiation From RNA Polymerase II Promoter Steroid Hormone Mediated Signaling Pathway Negative Regulation Of Cell Death Chromosome Organization Positive Regulation Of Transcription From RNA Polymerase II Promoter Regulation Of Nitrogen Compound Metabolic Process Intracellular Receptor Signaling Pathway Positive Regulation Of Metabolic Process Multicellular Organismal Development DNA-templated Transcription, Initiation Hormone-mediated Signaling Pathway Regulation Of Cell Proliferation Cellular Response To Hormone Stimulus Regulation Of Cellular Process Chromatin Modification	Positive Regulation Of Transcription, DNA-templated Positive Regulation Of Macromolecule Biosynthetic Process Positive Regulation Of Gene Expression Positive Regulation Of Cellular Biosynthetic Process Positive Regulation Of Cellular Metabolic Process Positive Regulation Of Transcription From RNA Polymerase II Promoter Positive Regulation Of Metabolic Process Regulation Of Cellular Response To Heat Regulation Of Transcription From RNA Polymerase II Promoter Chromatin Modification Regulation Of Sequence-specific DNA Binding Transcription Factor Activity Regulation Of Transcription, DNA-templated Positive Regulation By Host Of Viral Transcription Regulation Of Nucleic Acid-templated Transcription Regulation Of RNA Biosynthetic Process Regulation Of RNA Metabolic Process Chromatin Organization Cellular Response To Heat Nucleosome Disassembly Regulation Of Gene Expression Regulation Of Nitrogen Compound Metabolic Process Cell Cycle Developmental Process Cellular Response To Stress Regulation Of Transcription From RNA Polymerase II Promoter In Response To Hypoxia Organ Morphogenesis Response To Heat Chromosome Organization Transcription, DNA-templated Regulation Of Wnt Signaling Pathway Cell Cycle Process RNA Biosynthetic Process Anatomical Structure Morphogenesis Interaction With Symbiont Nucleobase-containing Compound Metabolic Process N-terminal Peptidyl-lysine Acetylation Embryo Development Response To Stress Multicellular Organismal Development Cellular Macromolecule Biosynthetic Process Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Macromolecule Biosynthetic Process Anatomical Structure Development Negative Regulation Of Transcription From RNA Polymerase II Promoter Chordate Embryonic Development Embryo Development Ending In Birth Or Egg Hatching Positive Regulation Of Viral Transcription Cellular Nitrogen Compound Metabolic Process Innate Immune Response
Tagcloud ?			blastocyst blastocysts buffalo caspase3 caspase6 caspase7 cleave cleaving cloning competence developmental dnmt1 dnmt3a ec embryos epigenetics h3k27me3 h3k9ac handmade hdac1 hmc ivf lc nanog oct4 pluripotency produced sox2 trophectoderm
Tagcloud (Difference) ?			blastocyst blastocysts buffalo caspase3 caspase6 caspase7 cleave cleaving cloning competence developmental dnmt1 dnmt3a ec embryos epigenetics h3k27me3 h3k9ac handmade hdac1 hmc ivf lc nanog oct4 pluripotency produced sox2 trophectoderm
Tagcloud (Intersection) ?