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SMARCD1 and CDC5L
Number of citations of the paper that reports this interaction (PubMedID
21988832
)
38
Data Source:
BioGRID
(two hybrid)
SMARCD1
CDC5L
Description
SWI/SNF related BAF chromatin remodeling complex subunit D1
cell division cycle 5 like
Image
GO Annotations
Cellular Component
Kinetochore
Chromatin
Nucleus
Nucleoplasm
Nuclear Matrix
SWI/SNF Complex
RSC-type Complex
Brahma Complex
NpBAF Complex
NBAF Complex
GBAF Complex
Prp19 Complex
Nucleus
Nucleoplasm
DNA Replication Factor A Complex
Spliceosomal Complex
Cytoplasm
Membrane
Nuclear Speck
U2-type Catalytic Step 2 Spliceosome
Catalytic Step 2 Spliceosome
Molecular Function
Chromatin Binding
Transcription Coregulator Activity
Transcription Coactivator Activity
Signaling Receptor Binding
Protein Binding
Molecular Adaptor Activity
RNA Polymerase II Transcription Regulatory Region Sequence-specific DNA Binding
DNA-binding Transcription Factor Activity, RNA Polymerase II-specific
DNA-binding Transcription Activator Activity, RNA Polymerase II-specific
DNA Binding
RNA Binding
Protein Binding
Protein Domain Specific Binding
Identical Protein Binding
WD40-repeat Domain Binding
Biological Process
Chromatin Organization
Nucleosome Disassembly
Chromatin Remodeling
Regulation Of Transcription By RNA Polymerase II
Nervous System Development
Positive Regulation Of Cell Population Proliferation
Regulation Of Mitotic Metaphase/anaphase Transition
Positive Regulation Of T Cell Differentiation
Negative Regulation Of Cell Differentiation
Positive Regulation Of Cell Differentiation
Positive Regulation Of Myoblast Differentiation
Transcription Initiation-coupled Chromatin Remodeling
Positive Regulation Of DNA-templated Transcription
Regulation Of G0 To G1 Transition
Cellular Response To Fatty Acid
Positive Regulation Of Stem Cell Population Maintenance
Regulation Of G1/S Transition Of Mitotic Cell Cycle
Positive Regulation Of Double-strand Break Repair
Regulation Of Nucleotide-excision Repair
DNA Damage Checkpoint Signaling
MRNA Splicing, Via Spliceosome
DNA Repair
Regulation Of DNA-templated Transcription
Regulation Of Transcription By RNA Polymerase II
MRNA Processing
DNA Damage Response
RNA Splicing
Positive Regulation Of Transcription By RNA Polymerase II
Pathways
RMTs methylate histone arginines
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known
Regulation of MITF-M-dependent genes involved in pigmentation
Regulation of MITF-M-dependent genes involved in pigmentation
Regulation of endogenous retroelements by Piwi-interacting RNAs (piRNAs)
Formation of the canonical BAF (cBAF) complex
Formation of the polybromo-BAF (pBAF) complex
Formation of the embryonic stem cell BAF (esBAF) complex
Formation of the non-canonical BAF (ncBAF) complex
Formation of neuronal progenitor and neuronal BAF (npBAF and nBAF)
Formation of neuronal progenitor and neuronal BAF (npBAF and nBAF)
mRNA Splicing - Major Pathway
Drugs
Diseases
GWAS
Body fat distribution (arm fat ratio) (
30664634
)
Body fat distribution (leg fat ratio) (
30664634
)
Body fat distribution (trunk fat ratio) (
30664634
)
Alzheimer disease and age of onset (
26830138
)
Chin dimples (
27182965
)
Femoral neck bone mineral density and trunk fat mass adjusted by trunk lean mass (
32239398
)
FEV1 (
30804560
)
Height (
28552196
)
Ischemic stroke (
26089329
)
Lung function (FVC) (
30804560
)
Male-pattern baldness (
27182965
)
Monobrow (
27182965
)
Nose morphology (
29921221
)
Ossification of the posterior longitudinal ligament of the spine (
25064007
)
Osteoarthritis (
22763110
)
Osteoarthritis of the hand (
28855172
)
Serum alkaline phosphatase levels (
33547301
)
Stroke (ischemic) (
22941190
)
Trunk fat mass adjusted for trunk lean mass (
32239398
)
Interacting Genes
156 interacting genes:
ABI1
ABI2
ABI3
ACTMAP
ADAT2
AIRIM
ANKRD23
ANKRD49
ANKS1A
ANP32B
APOA5
AR
ARMC10
ARRDC3
BCAS2
BEND5
BEX3
BLOC1S5
BRWD1
C4BPA
CALCOCO2
CCDC102B
CCDC197
CCDC33
CCDC85B
CDC5L
CDR2
CDSN
CDX2
CEACAM6
CFTR
CHFR
CHN2
CLNK
COG6
COL1A2
CORO1A
CUEDC1
CYSRT1
DCTN2
DISC1
EGFL7
EIF4G1
ESR1
ESS2
FAM136A
FAM161A
FBXO7
FEZ1
FOS
FUS
GATA1
GCC1
GIGYF1
GINS3
GOLGA6L9
GPRASP3
GRAMD4
HES6
HNRNPC
HOMEZ
HOXD3
HSF2BP
HSPB1
IGKC
IKBIP
IKZF3
INSC
IQCB1
JUN
KATNBL1
KDM1A
KEAP1
KIAA0753
KLF1
KMT5B
KRT15
KRT16
KRT18
KRT27
KRT31
KRT34
KRT37
KRT38
KRT75
LDB2
LDOC1
LZTS2
MAGEA2
MAGEA2B
MAGEA6
MED4
MKRN3
MTNR1B
MTUS2
NAB2
NECAB2
NELFA
NME1
NONO
NR1H4
NR3C1
NUCB2
NUDT16L1
NUTM1
OGT
PACSIN3
PAICS
PBX4
PCBD1
PGR
PICK1
PIH1D1
PKNOX2
PLAGL2
PPM1J
PRDX1
PRMT6
PSTPIP1
RIF1
RORB
RPS29
SCARA5
SCHIP1
SCNM1
SERTAD3
SHISA6
SMUG1
SNF8
SPSB2
STH
STMN3
SYCE1L
TCP10L
THOC7
TLE5
TNIP2
TP53
TRIM27
TRIM54
TRIM72
USHBP1
USP54
VPS37B
WASHC1
YJU2B
YWHAG
ZC2HC1C
ZMAT5
ZMYND12
ZNF417
ZNF438
ZNF511
ZNF629
ZNF655
ZNF69
92 interacting genes:
AKAP6
AKAP9
ANXA1
BICRAL
CALM1
CCDC136
CDC42
CDK2
CDKN1A
CDKN2A
CDT1
DISC1
DIXDC1
DST
EMID1
ERG
EXOC1
EXOC7
GOLGA2
GOLGA8EP
GOLGA8F
GRB14
GSE1
HNRNPM
HOOK1
KALRN
KANK2
KANSL1
KIF3C
KIF5B
KRT18
LDOC1
LMO2
MACF1
MCM10
MCM3
MCM4
MCM5
MELK
MIR106B
MIR107
MIR143
MIR200B
MIR214
MIR25
MIR31
MIR34A
MIR34B
MIR363
MIR429
MIRLET7A2
MIRLET7D
MIRLET7E
MIRLET7G
MIRLET7I
MTUS2
MYT1L
OGT
ORC1
ORC2
ORC5
PCBD2
PDE4DIP
PLRG1
PPFIA2
PPP1CA
PPP1R13B
PPP1R8
PRPF3
RNF10
SFR1
SH3BP5
SMARCD1
SPTBN1
SYNE1
SYNPO
TP53BP2
TRAF3IP1
TRAK1
TRIO
TTF2
TXLNA
USHBP1
USP7
VPS52
WWC1
YWHAG
YWHAQ
YWHAZ
ZNF35
ZNF451
ZSCAN1
Entrez ID
6602
988
HPRD ID
03438
04184
Ensembl ID
ENSG00000066117
ENSG00000096401
Uniprot IDs
Q96GM5
Q99459
PDB IDs
6LTH
6LTJ
7VDV
7Y8R
2DIM
2DIN
5MQF
5XJC
5YZG
5Z56
5Z57
5Z58
6FF4
6FF7
6ICZ
6ID0
6ID1
6QDV
6ZYM
7A5P
7AAV
7ABG
7ABH
7ABI
7DVQ
7QTT
7W59
7W5A
7W5B
8C6J
8CH6
8I0P
8I0R
8I0S
8I0T
8I0U
8I0V
8I0W
8RO2
9FMD
Enriched GO Terms of Interacting Partners
?
Protein Binding
Identical Protein Binding
Structural Constituent Of Skin Epidermis
Intermediate Filament Cytoskeleton Organization
Keratin Filament
Intermediate Filament-based Process
Nucleus
Intermediate Filament Organization
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Estrogen Response Element Binding
Supramolecular Fiber Organization
Cytoskeleton
Negative Regulation Of RNA Metabolic Process
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of RNA Biosynthetic Process
Regulation Of Primary Metabolic Process
Regulation Of Transcription By RNA Polymerase II
Regulation Of RNA Metabolic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Nuclear Receptor Activity
DNA-binding Transcription Factor Activity
Intermediate Filament
Regulation Of Actin Nucleation
Regulation Of Nucleobase-containing Compound Metabolic Process
Developmental Process
DNA-binding Transcription Activator Activity, RNA Polymerase II-specific
Structural Molecule Activity
Actin-based Cell Projection
Positive Regulation Of Macromolecule Metabolic Process
Positive Regulation Of Metabolic Process
Regulation Of MiRNA Transcription
RNA Polymerase II-specific DNA-binding Transcription Factor Binding
Sequence-specific DNA Binding
Positive Regulation Of RNA Biosynthetic Process
Positive Regulation Of DNA-templated Transcription
Transcription Coactivator Binding
RNA Polymerase II Transcription Regulatory Region Sequence-specific DNA Binding
Steroid Binding
SCAR Complex
Positive Regulation Of MiRNA Transcription
Cornified Envelope
Regulation Of MiRNA Metabolic Process
Positive Regulation Of RNA Metabolic Process
Negative Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of Ubiquitin-protein Transferase Activity
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
Tertiary Branching Involved In Mammary Gland Duct Morphogenesis
Protein Kinase C Inhibitor Activity
Cytoskeleton Organization
MRNA Base-pairing Post-transcriptional Repressor Activity
MiRNA-mediated Post-transcriptional Gene Silencing
Regulatory NcRNA-mediated Post-transcriptional Gene Silencing
Post-transcriptional Gene Silencing
Regulatory NcRNA-mediated Gene Silencing
RISC Complex
DNA Replication Initiation
Post-transcriptional Regulation Of Gene Expression
Regulation Of DNA-templated DNA Replication Initiation
DNA Replication Origin Binding
MRNA 3'-UTR Binding
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Gene Expression
DNA Replication
Negative Regulation Of Biosynthetic Process
MiRNA-mediated Gene Silencing By Inhibition Of Translation
Negative Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Metabolic Process
MiRNA-mediated Gene Silencing By MRNA Destabilization
Regulation Of G1/S Transition Of Mitotic Cell Cycle
Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Developmental Process
Origin Recognition Complex
Regulation Of DNA Replication
Positive Regulation Of Tissue Remodeling
Chromosome, Telomeric Region
Regulation Of Metabolic Process
Regulation Of Cell Cycle G1/S Phase Transition
Negative Regulation Of Translation
Extracellular Vesicle
Nuclear Origin Of Replication Recognition Complex
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Gene Expression
Cytoskeleton
CMG Complex
MCM Complex
Negative Regulation Of Leukocyte Adhesion To Vascular Endothelial Cell
Positive Regulation Of Connective Tissue Replacement
Double-strand Break Repair Via Break-induced Replication
Negative Regulation Of Transmembrane Transport
Regulation Of Cell Cycle
Glutamatergic Synapse
Regulation Of Connective Tissue Replacement
Molecular Adaptor Activity
Microtubule Binding
Negative Regulation Of Protein Metabolic Process
Regulation Of Mitotic Cell Cycle Phase Transition
Microtubule
Cytoskeleton-dependent Intracellular Transport
Negative Regulation Of Protein-containing Complex Assembly
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