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LRIF1 and H3-4
Number of citations of the paper that reports this interaction (PubMedID
20850016
)
0
Data Source:
BioGRID
(unspecified method)
LRIF1
H3-4
Description
ligand dependent nuclear receptor interacting factor 1
H3.4 histone, cluster member
Image
No pdb structure
GO Annotations
Cellular Component
Chromosome, Telomeric Region
Barr Body
Nucleus
Nucleoplasm
Chromosome
Nuclear Matrix
Centriolar Satellite
Chromosome, Telomeric Region
Nucleosome
Heterochromatin
Condensed Nuclear Chromosome
Nucleus
Nucleoplasm
Chromosome
Extracellular Exosome
Molecular Function
Protein Binding
Nuclear Retinoic Acid Receptor Binding
DNA Binding
Protein Binding
Structural Constituent Of Chromatin
Protein Heterodimerization Activity
Biological Process
Regulation Of DNA-templated Transcription
Dosage Compensation By Inactivation Of X Chromosome
Chromatin Organization
Nucleosome Assembly
DNA Replication-dependent Chromatin Assembly
Spermatogonial Cell Division
Regulation Of Cell Differentiation
Pathways
Recognition and association of DNA glycosylase with site containing an affected pyrimidine
Cleavage of the damaged pyrimidine
Recognition and association of DNA glycosylase with site containing an affected purine
Recognition and association of DNA glycosylase with site containing an affected purine
Cleavage of the damaged purine
Cleavage of the damaged purine
Meiotic synapsis
Packaging Of Telomere Ends
Formation of the beta-catenin:TCF transactivating complex
Formation of the beta-catenin:TCF transactivating complex
Condensation of Prophase Chromosomes
DNA Damage/Telomere Stress Induced Senescence
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks
Nonhomologous End-Joining (NHEJ)
Processing of DNA double-strand break ends
G2/M DNA damage checkpoint
Meiotic recombination
Inhibition of DNA recombination at telomere
Drugs
Diseases
GWAS
Bone mineral content (
31790847
)
Intraocular pressure (
30591961
)
Interacting Genes
143 interacting genes:
AKR1C3
ANKRD24
ANXA1
ANXA7
APLP1
ARL3
ATF3
ATP1B1
BANP
BARD1
BMI1
BOC
BRD7
BRMS1
CALR
CBX1
CBX5
CCDC106
CDC42
CDKN1A
CDKN2C
CETN3
CHD3
CKMT2
COX17
CPE
CRACR2A
CRADD
CRCP
CRCT1
CRIPTO
DDIT4
EIF6
ESR1
ETHE1
FAS
FEZ1
FHL2
FOSL2
FXR1
GADD45G
GC
GIT1
GPRASP2
GSTM4
H3-4
HAP1
HLA-DQA1
HMGB1
HMOX2
HSPB1
HSPB3
HSPBP1
HSPE1
ID2
IMMT
KAT5
KAT7
KBTBD7
KCNE3
KLHL20
KLK10
LAMA4
LAMTOR5
MAD2L1BP
MLLT3
MNAT1
MOB4
MPHOSPH6
MRPS12
MRPS6
NACA
NOC2L
NR3C1
NRBP1
NTAQ1
PAEP
PAFAH1B3
PCDHA4
PDCD5
PFDN1
PFN1
PIAS4
PIN1
PLEKHA4
PNP
POLR1C
POLR2C
POLR3F
PPARG
PQBP1
PRKAB2
PRKAR2A
PRMT1
PSG9
PSMD11
PSMD2
PSPC1
RAB27A
RAP1B
RARA
RBM5
RCC1
RFC5
RHOH
RIT1
RNF10
RORA
RPA2
RPL37A
RPLP1
RRM1
S100A8
SAT1
SELENBP1
SERPINB9
SETDB1
SMN1
SNRPN
SNU13
SPATA18
SPG7
STX5
SULT1E1
SUPT4H1
SUV39H2
TAF1D
TGIF1
THRB
TK1
TRBV2
TRDMT1
TSC22D1
TSEN15
TSPAN6
UBE2V2
UNC119
VIM
VPS26C
WDR62
WWC1
ZNF24
ZNF410
195 interacting genes:
ADNP
AFF1
AHDC1
ANP32A
ASF1A
ASH2L
ATAD2
AURKA
AURKB
BACC1
BIRC5
BMI1
BPTF
BRD7
CBX1
CBX2
CBX3
CBX4
CBX5
CBX7
CBX8
CDYL
CDYL2
CHAF1A
CHAF1B
CHAMP1
CHD1
CHD4
CHD6
CHUK
COPRS
CREBBP
CTBP1
CTBP2
DCAF1
DEK
DNMT1
DOT1L
DPF2
DPY30
DYRK2
EGFR
EHMT1
EHMT2
EMSY
EP300
ERAP1
EZH2
FOXA1
GADD45A
GATAD1
GLYR1
GTF3C4
HAT1
HDAC1
HDAC2
HDAC8
HIRIP3
HMGXB4
HNRNPA1
HNRNPA2B1
HNRNPAB
HNRNPL
HNRNPR
HPF1
ING2
ING4
IRAK1
JADE2
JADE3
JAK1
JAK2
KAT2A
KAT2B
KAT5
KAT6A
KDM1A
KDM1B
KDM2A
KDM3B
KDM5A
KDM5D
KDM6A
KIF2A
KIF2C
KMT2C
KPNA1
LRIF1
LRWD1
MBD3
MCM2
MCM7
MDM2
MEN1
MGA
MIER1
MLLT1
MORF4L1
MSL3
MTA1
MTA2
MYB
NAP1L4
NASP
NBN
NCL
NCOA2
NCOA3
NOC2L
NONO
NPM1
NSD1
NSD2
ORC2
ORC3
ORC4
ORC5
PARP1
PARP2
PCGF6
PHC2
PHC3
PHF12
PHF7
PHF8
PHRF1
PIM1
POGZ
PPIB
PPM1G
PRDM2
PRKCA
PRMT5
PTBP1
PTMA
RAG1
RBBP4
RBBP5
RBBP7
RBP5
RCOR1
RING1
RIPPLY1
RNF2
RPS6KA3
RPS6KA5
RREB1
SAP30
SET
SETD2
SETD7
SETDB1
SFPQ
SGF29
SIN3A
SIN3B
SMN1
SMNDC1
SMYD3
SUPT20H
SUPT3H
SUV39H1
SUZ12
TADA1
TADA3
TAF1
TAF10
TAF11
TAF12
TAF13
TAF15
TAF1A
TAF2
TAF3
TAF4
TAF4B
TAF5
TAF5L
TAF6
TAF6L
TAF7
TAF8
TAF9
TAF9B
TBP
TCF19
TDRD3
TNPO1
TRPM7
UHRF1
WDR5
ZMYM4
ZMYND11
ZNF217
ZNF516
Entrez ID
55791
8290
HPRD ID
17975
04156
Ensembl ID
ENSG00000121931
ENSG00000168148
Uniprot IDs
Q5T3J3
Q16695
PDB IDs
2V1D
2YBP
2YBS
3A6N
3T6R
4V2V
4V2W
6OIE
6WAT
6WAU
8VMI
8Z50
Enriched GO Terms of Interacting Partners
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Nucleus
Nucleoplasm
Protein Binding
Cytoplasm
Regulation Of Metabolic Process
Positive Regulation Of Metabolic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Programmed Cell Death
Positive Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Metabolic Process
Regulation Of Apoptotic Process
Chromatin Binding
Positive Regulation Of Programmed Cell Death
Regulation Of Macromolecule Metabolic Process
Negative Regulation Of RNA Metabolic Process
Nuclear Receptor Activity
Regulation Of Intracellular Signal Transduction
Negative Regulation Of Intracellular Signal Transduction
Positive Regulation Of Cell Population Proliferation
Regulation Of Primary Metabolic Process
Negative Regulation Of Macromolecule Metabolic Process
Cytosol
Positive Regulation Of Apoptotic Process
Nucleolus
Negative Regulation Of Transcription By RNA Polymerase II
Biological_process
Negative Regulation Of DNA-templated Transcription
Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of RNA Biosynthetic Process
Negative Regulation Of Biosynthetic Process
Negative Regulation Of Macromolecule Biosynthetic Process
Regulation Of G1/S Transition Of Mitotic Cell Cycle
Regulation Of Cell Development
Negative Regulation Of Gene Expression
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Gene Expression
Regulation Of Hemopoiesis
Chromatin Organization
Regulation Of Cell Differentiation
Mononuclear Cell Differentiation
Regulation Of Lymphocyte Differentiation
Positive Regulation Of Macromolecule Biosynthetic Process
Regulation Of Signal Transduction
Positive Regulation Of Fibroblast Proliferation
DNA-directed RNA Polymerase Activity
Positive Regulation Of Biosynthetic Process
Chromatin Remodeling
Regulation Of Cell Cycle Process
Regulation Of DNA Repair
Regulation Of Cell Cycle G1/S Phase Transition
Chromatin Organization
Chromatin Remodeling
Nucleoplasm
Nucleus
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of RNA Metabolic Process
Chromatin Binding
Regulation Of Gene Expression
Regulation Of Macromolecule Metabolic Process
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Primary Metabolic Process
Regulation Of Metabolic Process
Negative Regulation Of RNA Metabolic Process
Negative Regulation Of DNA-templated Transcription
Regulation Of Transcription By RNA Polymerase II
Negative Regulation Of RNA Biosynthetic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Biosynthetic Process
Negative Regulation Of Macromolecule Metabolic Process
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of Transcription By RNA Polymerase II
Epigenetic Regulation Of Gene Expression
Positive Regulation Of DNA-templated Transcription
Positive Regulation Of RNA Biosynthetic Process
Histone Binding
Positive Regulation Of RNA Metabolic Process
Negative Regulation Of Metabolic Process
Positive Regulation Of Macromolecule Biosynthetic Process
Positive Regulation Of Macromolecule Metabolic Process
Positive Regulation Of Biosynthetic Process
Chromatin
Positive Regulation Of Metabolic Process
Regulation Of DNA Metabolic Process
Regulation Of DNA Repair
Transcription Factor TFIID Complex
Chromosome
Protein-DNA Complex Assembly
Nucleic Acid Metabolic Process
RNA Polymerase II General Transcription Initiation Factor Activity
Transcription Factor TFTC Complex
Negative Regulation Of Gene Expression, Epigenetic
SAGA Complex
MRNA Transcription By RNA Polymerase II
Regulation Of Cellular Response To Stress
RNA Polymerase II Preinitiation Complex Assembly
Transcription Coactivator Activity
Chromosome, Telomeric Region
Tagcloud
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Tagcloud (Difference)
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Tagcloud (Intersection)
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