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RNF2 and TARDBP
Number of citations of the paper that reports this interaction (PubMedID
24825905
)
69
Data Source:
BioGRID
(two hybrid)
RNF2
TARDBP
Description
ring finger protein 2
TAR DNA binding protein
Image
GO Annotations
Cellular Component
Ubiquitin Ligase Complex
Euchromatin
Heterochromatin
Sex Chromatin
Nucleus
Nucleoplasm
Chromosome
Cytoplasm
Nuclear Body
PcG Protein Complex
PRC1 Complex
MLL1 Complex
Chromatin
Nucleus
Nucleoplasm
Perichromatin Fibrils
Cytoplasm
Mitochondrion
Cytoplasmic Stress Granule
Nuclear Speck
Interchromatin Granule
Molecular Function
Chromatin Binding
Ubiquitin-protein Transferase Activity
Protein Binding
Zinc Ion Binding
Transferase Activity
Metal Ion Binding
Ubiquitin Protein Ligase Activity
RING-like Zinc Finger Domain Binding
Histone H2AK119 Ubiquitin Ligase Activity
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
Nucleic Acid Binding
DNA Binding
Double-stranded DNA Binding
RNA Binding
MRNA 3'-UTR Binding
Protein Binding
Lipid Binding
Identical Protein Binding
Pre-mRNA Intronic Binding
Molecular Condensate Scaffold Activity
Biological Process
Negative Regulation Of Transcription By RNA Polymerase II
Mitotic Cell Cycle
Gastrulation With Mouth Forming Second
Chromatin Organization
Chromatin Remodeling
Germ Cell Development
Anterior/posterior Axis Specification
Gene Expression
Protein Ubiquitination
Epigenetic Regulation Of Gene Expression
Negative Regulation Of DNA-binding Transcription Factor Activity
Negative Regulation Of Protein Phosphorylation
MRNA Processing
RNA Splicing
Gene Expression
Regulation Of Gene Expression
Negative Regulation Of Gene Expression
Regulation Of Protein Stability
Positive Regulation Of Insulin Secretion
Response To Endoplasmic Reticulum Stress
Positive Regulation Of Protein Import Into Nucleus
Regulation Of Circadian Rhythm
Regulation Of Apoptotic Process
Host-mediated Suppression Of Viral Transcription
Rhythmic Process
Regulation Of Cell Cycle
3'-UTR-mediated MRNA Destabilization
3'-UTR-mediated MRNA Stabilization
Nuclear Inner Membrane Organization
Amyloid Fibril Formation
Pathways
Oxidative Stress Induced Senescence
SUMOylation of DNA damage response and repair proteins
SUMOylation of transcription cofactors
SUMOylation of chromatin organization proteins
SUMOylation of RNA binding proteins
SUMOylation of DNA methylation proteins
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known
Regulation of PTEN gene transcription
Regulation of PTEN gene transcription
Transcriptional Regulation by E2F6
Drugs
Diseases
Amyotrophic lateral sclerosis (ALS); Lou Gehrig's disease
GWAS
Clopidogrel active metabolite levels (
28207573
)
Itch intensity from mosquito bite adjusted by bite size (
28199695
)
Obesity-related traits (
23251661
)
Beard thickness (
26926045
)
Ewing sarcoma (
22327514
)
Male-pattern baldness (
22693459
28196072
)
Interacting Genes
65 interacting genes:
ABCB1
AMBRA1
BAALC
BMI1
CASP3
CASP9
CBX4
CBX6
CBX7
CBX8
CIP2A
DYSF
ERG
GMNN
H2AC18
H2AC20
H2AC4
H2BC3
H3-4
KAT8
KMT2A
MBD1
MTNR1A
OTUD6A
PCGF1
PCGF2
PCGF6
PGP
PHB2
PHC1
PHC2
PLK1
PSMC4
RING1
RRM1
RYBP
SBDS
SCMH1
SIK1
SMURF2
SSX2
TARDBP
TFCP2
TMEM132D
TSC22D2
UBC
UBE2D1
UBE2D2
UBE2D3
UBE2D4
UBE2E1
UBE2E2
UBE2E3
UBE2H
UBE2J1
UBE2K
UBE2L3
UBE2U
UBE2V1
UBE2V2
UBE2W
UBE3A
USP11
USP19
WASHC1
18 interacting genes:
APP
ARHGEF28
EXOSC10
FBXO7
IRAK2
LONRF2
LSM6
MED6
NACC1
NSFL1C
RACK1
RNF126
RNF2
SETDB1
UBQLN1
XRN2
ZFAND2B
ZHX1
Entrez ID
6045
23435
HPRD ID
07028
05466
Ensembl ID
ENSG00000121481
ENSG00000120948
Uniprot IDs
Q99496
Q13148
Q9H256
PDB IDs
2H0D
3GS2
3H8H
3IXS
3RPG
4R8P
4S3O
6WI7
6WI8
7ND1
8GRM
8PP7
9DBY
9DDE
9DGG
1WF0
2CQG
2N2C
2N3X
2N4G
2N4H
2N4P
4BS2
4IUF
4Y00
4Y0F
5MDI
5MRG
5W50
5W52
5W7V
5WHN
5WHP
5WIA
5WIQ
5WKB
5WKD
5X4F
6B1G
6CF4
6CFH
6N37
6N3A
6N3B
6N3C
6T4B
7KWZ
7N9H
7PY2
7Q3U
8A6I
8CG3
8CGG
8CGH
8QX9
8QXA
8QXB
9FOF
9FOR
Enriched GO Terms of Interacting Partners
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Ubiquitin Conjugating Enzyme Activity
PRC1 Complex
PcG Protein Complex
Post-translational Protein Modification
Protein Polyubiquitination
Protein Modification By Small Protein Conjugation
Protein Ubiquitination
Protein Modification Process
Nucleus
Protein K48-linked Ubiquitination
Ubiquitin-protein Transferase Activity
Negative Regulation Of Biosynthetic Process
Chromatin Organization
Negative Regulation Of Macromolecule Biosynthetic Process
Protein K11-linked Ubiquitination
Nucleoplasm
Proteolysis Involved In Protein Catabolic Process
Negative Regulation Of Metabolic Process
Negative Regulation Of RNA Metabolic Process
Regulation Of Macromolecule Metabolic Process
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of RNA Biosynthetic Process
Proteolysis
Negative Regulation Of Macromolecule Metabolic Process
Chromatin Remodeling
Protein Metabolic Process
Modification-dependent Protein Catabolic Process
Regulation Of Metabolic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Gene Expression
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Regulation Of Macromolecule Biosynthetic Process
Ubiquitin-dependent Protein Catabolic Process
Ubiquitin-protein Transferase Activator Activity
Regulation Of RNA Metabolic Process
Regulation Of Primary Metabolic Process
Macromolecule Catabolic Process
Regulation Of Nucleobase-containing Compound Metabolic Process
Positive Regulation Of Protein Ubiquitination
Chromatin Binding
Positive Regulation Of Post-translational Protein Modification
Regulation Of Protein Ubiquitination
Transferase Activity
Heterochromatin Formation
Heterochromatin
Proteasomal Protein Catabolic Process
Sex Chromatin
Protein Monoubiquitination
Negative Regulation Of Transcription By RNA Polymerase II
Macromolecule Catabolic Process
Regulation Of Oxidative Stress-induced Intrinsic Apoptotic Signaling Pathway
Protein Heterodimerization Activity
Regulation Of Intrinsic Apoptotic Signaling Pathway
Macromolecule Metabolic Process
Protein Metabolic Process
Proteolysis Involved In Protein Catabolic Process
Regulation Of Response To Endoplasmic Reticulum Stress
Proteasomal Protein Catabolic Process
Ubiquitin Binding
Nucleoplasm
Negative Regulation Of Macromolecule Biosynthetic Process
Nucleus
Ubiquitin Ligase Complex
Negative Regulation Of Biosynthetic Process
Modification-dependent Protein Catabolic Process
Ubiquitin-dependent Protein Catabolic Process
MRNA Catabolic Process
Protein Ubiquitination
Protein Catabolic Process
3'-5'-RNA Exonuclease Activity
Regulation Of Metabolic Process
Catabolic Process
Zinc Ion Binding
Ubiquitin Protein Ligase Activity
Aggresome
Protein Quality Control For Misfolded Or Incompletely Synthesized Proteins
Negative Regulation Of Oxidative Stress-induced Intrinsic Apoptotic Signaling Pathway
Amyloid-beta Complex
Growth Cone Lamellipodium
Negative Regulation Of Gene Expression
Regulation Of Response To Calcium Ion
Amylin Binding
Positive Regulation Of Toll Signaling Pathway
Positive Regulation Of Response To Endoplasmic Reticulum Stress
Negative Regulation Of Macromolecule Metabolic Process
Regulation Of Apoptotic Signaling Pathway
Cytoplasm
Nuclear Polyadenylation-dependent Antisense Transcript Catabolic Process
Protein Modification By Small Protein Conjugation
Proteasome-mediated Ubiquitin-dependent Protein Catabolic Process
Glial Cytoplasmic Inclusion
Classical Lewy Body
Lewy Body Corona
Lewy Neurite
Negative Regulation Of Store-operated Calcium Channel Activity
Polyubiquitin Modification-dependent Protein Binding
Regulation Of Macromolecule Metabolic Process
RNA Catabolic Process
Exonuclease Activity
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Tagcloud (Intersection)
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