SMAD9 and ARID1B

Number of citations of the paper that reports this interaction (PMID 15231748)
65

Data Source:
HPRD (two hybrid)

		SMAD9	ARID1B
Gene Name		SMAD family member 9	AT rich interactive domain 1B (SWI1-like)
Image		No pdb structure
Gene Ontology Annotations	Cellular Component	Intracellular Nucleus Nucleoplasm Transcription Factor Complex Cytoplasm Cytosol	Nucleoplasm Cytoplasm SWI/SNF Complex NBAF Complex
	Molecular Function	DNA Binding Sequence-specific DNA Binding Transcription Factor Activity Protein Binding Transforming Growth Factor Beta Receptor, Pathway-specific Cytoplasmic Mediator Activity Metal Ion Binding	DNA Binding Transcription Coactivator Activity Protein Binding
	Biological Process	Ureteric Bud Development Response To Hypoxia Mullerian Duct Regression Transcription, DNA-templated Protein Phosphorylation Transforming Growth Factor Beta Receptor Signaling Pathway BMP Signaling Pathway Midbrain Development Hindbrain Development Intracellular Signal Transduction Positive Regulation Of Cell Differentiation Positive Regulation Of Transcription, DNA-templated Cartilage Development Bone Development Cellular Response To Organic Cyclic Compound	Transcription, DNA-templated Nervous System Development Chromatin-mediated Maintenance Of Transcription
Pathways		Signaling by BMP	Chromatin modifying enzymes Chromatin organization RMTs methylate histone arginines
Drugs
Diseases
GWAS			Alzheimer's disease biomarkers ( 23419831) Pancreatic cancer ( 22158540) Uric acid levels ( 21294900)
Protein-Protein Interactions		117 interactors: ABTB1 ACTB ACVR1 AFF1 AP2A1 ARHGAP9 ARID1B ARNT ASB2 ASH2L BAZ1A BTG2 C10orf2 CAMSAP1 CEP135 CHPF CLPB CPXM2 CSH1 CSH2 CTR9 CXXC5 CYP11A1 DIAPH3 DKK1 DNAJA3 DNAJC7 DST DSTN E4F1 EIF3C EIF3E EIF3F ERVV-1 EVC2 EXPH5 FLI1 FN1 FTL GRN HEY1 HEYL HUWE1 KDM1A KDM6A KIAA0226 KMT2D LEMD3 LMO4 LNPEP LRP5 MAN1A2 MAN1C1 MAN2B1 MBD1 MCM3AP METAP1 MGAT1 MTMR10 MTMR11 NAGK OTUB1 PABPC4 PAPPA PELP1 PHKA2 PIR PKP2 PLEC PNPLA2 PPARD PPP2R5E PRMT6 PSAP PSMD8 QARS RANBP9 RFX1 RMND5A RNF123 RRBP1 SECISBP2 SF3B1 SIL1 SMAD2 SMAD3 SMAD4 SMG1 SNRNP70 SPTBN1 STAG1 SVEP1 TBCD TERF1 TINAGL1 TMEM57 TOB1 TRIM29 TRIP12 TTC37 UBA6 UBE3A UBQLN1 UBQLN4 UNC45A VCPIP1 VPS8 XAB2 YWHAQ ZEB2 ZNF484 ZNF557 ZNF587 ZNF587B ZNF592 ZNF83 ZSCAN4	5 interactors: CUL2 HIST2H2BE SMAD9 SMARCA2 SMARCA4
Entrez ID		4093	57492
HPRD ID		04484	10660
Ensembl ID		ENSG00000120693	ENSG00000049618
Uniprot IDs		O15198	Q8NFD5
PDB IDs			2CXY 2EH9
Enriched GO Terms of Interacting Partners?		Cellular Macromolecule Biosynthetic Process Macromolecule Biosynthetic Process Gene Expression Cellular Metabolic Process Transcription, DNA-templated Biosynthetic Process RNA Metabolic Process RNA Biosynthetic Process Negative Regulation Of Biosynthetic Process Regulation Of Cellular Protein Metabolic Process Negative Regulation Of Cellular Metabolic Process Regulation Of Metabolic Process Cellular Process Cellular Protein Metabolic Process Protein Metabolic Process Regulation Of Gene Expression Nucleobase-containing Compound Metabolic Process Gastrulation Anterior/posterior Pattern Specification Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Positive Regulation Of Gene Expression Regulation Of Nitrogen Compound Metabolic Process Regulation Of Protein Metabolic Process Positive Regulation Of Transcription, DNA-templated Negative Regulation Of Gene Expression Developmental Process Cellular Nitrogen Compound Metabolic Process Negative Regulation Of Transmembrane Receptor Protein Serine/threonine Kinase Signaling Pathway Positive Regulation Of Transcription From RNA Polymerase II Promoter Multicellular Organismal Development Atrioventricular Valve Morphogenesis Endoderm Development Nitrogen Compound Metabolic Process Formation Of Primary Germ Layer Cell Differentiation Atrioventricular Valve Development Regulation Of Transcription From RNA Polymerase II Promoter Anatomical Structure Development Transcription From RNA Polymerase II Promoter Organ Development Negative Regulation Of Nucleic Acid-templated Transcription Regulation Of RNA Metabolic Process Embryo Development Negative Regulation Of RNA Biosynthetic Process Positive Regulation Of Macromolecule Biosynthetic Process SMAD Protein Complex Assembly Posttranscriptional Regulation Of Gene Expression Negative Regulation Of Transcription, DNA-templated Pattern Specification Process	Aortic Smooth Muscle Cell Differentiation Vascular Smooth Muscle Cell Differentiation Smooth Muscle Cell Differentiation Regulation Of Transcription From RNA Polymerase II Promoter Chromatin Organization Nucleosome Organization Negative Regulation Of Transcription From RNA Polymerase II Promoter During Mitosis Chromatin Assembly Or Disassembly Negative Regulation Of Cell Growth Hindbrain Development Chromatin Remodeling Chromosome Organization DNA Methylation On Cytosine Within A CG Sequence Negative Regulation Of Growth Definitive Erythrocyte Differentiation Response To Hypoxia Glial Cell Fate Determination Methylation-dependent Chromatin Silencing Mullerian Duct Regression Positive Regulation Of Transcription, DNA-templated Muscle Cell Differentiation Regulation Of Cell Growth Positive Regulation By Host Of Viral Transcription Positive Regulation Of Macromolecule Biosynthetic Process Positive Regulation Of Gene Expression DNA Methylation On Cytosine Positive Regulation Of Cellular Biosynthetic Process Negative Regulation Of Androgen Receptor Signaling Pathway Nucleosome Disassembly Blastocyst Hatching Negative Regulation Of Cell Cycle Heart Trabecula Formation Innate Immune Response In Mucosa Anatomical Structure Regression Lens Fiber Cell Development Muscle Structure Development Regulation Of Androgen Receptor Signaling Pathway Regulation Of Transcription, DNA-templated Glial Cell Fate Commitment Regulation Of Nucleic Acid-templated Transcription Vasculature Development Regulation Of RNA Biosynthetic Process Definitive Hemopoiesis Regulation Of Transcription From RNA Polymerase II Promoter In Response To Hypoxia Regulation Of RNA Metabolic Process Antibacterial Humoral Response Heart Trabecula Morphogenesis Antimicrobial Humoral Response Chromatin Modification Blastocyst Growth
Tagcloud ?			arid2 baf bcl11a bcl11b brd9 calu catalogue constructs cosmic deposited driver establishment existed hairpin knocked mswi mutated ones pearson psuper ranking reporters shrna slippage smarca4 snf sublines swi typing
Tagcloud (Difference) ?			arid2 baf bcl11a bcl11b brd9 calu catalogue constructs cosmic deposited driver establishment existed hairpin knocked mswi mutated ones pearson psuper ranking reporters shrna slippage smarca4 snf sublines swi typing
Tagcloud (Intersection) ?