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SF3B4 and APBB1
Number of citations of the paper that reports this interaction (PubMedID
16055720
)
76
Data Source:
BioGRID
(pull down)
SF3B4
APBB1
Description
splicing factor 3b subunit 4
amyloid beta precursor protein binding family B member 1
Image
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Spliceosomal Complex
U2-type Spliceosomal Complex
U2 SnRNP
U12-type Spliceosomal Complex
U2-type Precatalytic Spliceosome
Precatalytic Spliceosome
Nucleus
Nucleoplasm
Cytoplasm
Endoplasmic Reticulum
Plasma Membrane
Membrane
Nuclear Speck
Lamellipodium
Growth Cone
Cell Projection
Synapse
Molecular Function
Nucleic Acid Binding
RNA Binding
Protein Binding
Splicing Factor Binding
Amyloid-beta Binding
Chromatin Binding
Transcription Coactivator Activity
Protein Binding
Ubiquitin Protein Ligase Binding
Histone Binding
Low-density Lipoprotein Particle Receptor Binding
Molecular Adaptor Activity
Proline-rich Region Binding
Biological Process
RNA Splicing, Via Transesterification Reactions
MRNA Splicing, Via Spliceosome
MRNA Processing
RNA Splicing
U2-type Prespliceosome Assembly
Negative Regulation Of Transcription By RNA Polymerase II
Chromatin Organization
Regulation Of DNA-templated Transcription
Apoptotic Process
Smooth Muscle Contraction
DNA Damage Response
Signal Transduction
Axonogenesis
Positive Regulation Of Neuron Projection Development
Positive Regulation Of Apoptotic Process
Positive Regulation Of DNA-templated Transcription
Positive Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of Protein Secretion
Negative Regulation Of Cell Cycle G1/S Phase Transition
Pathways
mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks
Drugs
Diseases
GWAS
Anthropometric traits (
30166351
)
Anthropometric traits (multi-trait analysis) (
30166351
)
Birth length (
25281659
)
Body fat distribution (leg fat ratio) (
30664634
)
Body fat distribution (trunk fat ratio) (
30664634
)
Height (
18391951
20881960
31562340
)
Infant length (
25281659
)
Waist circumference adjusted for BMI (adjusted for smoking behaviour) (
28443625
)
Waist circumference adjusted for BMI (joint analysis main effects and smoking interaction) (
28443625
)
Waist circumference adjusted for BMI in non-smokers (
28443625
)
Waist circumference adjusted for body mass index (
25673412
)
Malaria (
31844061
)
Interacting Genes
115 interacting genes:
APBB1
BAG3
BAG4
BAIAP2
BMPR1A
CD2BP2
CHERP
CPSF7
CTTN
CWF19L2
DDX17
DDX42
DMRTB1
EEF1A1
EFTUD2
EWSR1
FARSB
FKBP1A
FRK
GRB2
HNRNPD
HNRNPF
HNRNPH1
HNRNPUL1
HSPB7
ILF3
ITSN1
KHDRBS2
MAPK9
METTL17
MIR1-1
MIR106A
MIR106B
MIR107
MIR10B
MIR128-1
MIR128-2
MIR138-1
MIR138-2
MIR141
MIR145
MIR155
MIR15B
MIR16-1
MIR16-2
MIR17
MIR18B
MIR19A
MIR19B1
MIR19B2
MIR200A
MIR200B
MIR200C
MIR205
MIR20B
MIR21
MIR221
MIR222
MIR25
MIR29A
MIR29C
MIR31
MIR34A
MIR34B
MIR34C
MIR363
MIR429
MIR451A
MIR7-1
MIR7-3
MIR9-1
MIR92A1
MIR92A2
MIR93
MIRLET7A1
MIRLET7A2
MIRLET7A3
MIRLET7C
MIRLET7D
MIRLET7E
MIRLET7F1
MIRLET7G
MIRLET7I
NCK2
NUB1
OGT
PPP1R16B
PRPF6
QARS1
RAMAC
RBFOX2
RBM10
RBM39
RBM4
RPP25
SEC24D
SF1
SF3B2
SFPQ
SRSF6
SS18L1
SUMO4
TCAF1
TCERG1
TFG
TLE5
TRAF4
UBASH3A
WBP4
WDR4
WDR77
WHR1
ZCCHC10
ZNF3
ZNF48
72 interacting genes:
ABI1
ABL1
ALK
ANXA1
APLP1
APLP2
APP
ATM
ATR
ATXN1
ATXN1L
CCDC97
CHERP
CLSTN1
CPSF6
CPSF7
CYFIP1
CYFIP2
DDX17
DDX3X
DDX46
DHX15
DHX9
DIAPH1
DIAPH2
EGFR
ELMO1
ENAH
ERBB2
EVL
FASLG
HNRNPH1
HNRNPK
HTATSF1
KAT5
KHDRBS1
KHSRP
LRP1
LRP2
NONO
PABPC1
PQBP1
PRNP
PTBP1
RBM17
RPL4
SF1
SF3A1
SF3A2
SF3A3
SF3B1
SF3B2
SF3B3
SF3B4
SFPQ
SNCA
TENM1
TFCP2
THRAP3
TSHZ1
TSHZ2
TSHZ3
U2AF2
VASP
WAS
WASF2
WASL
WBP11
WIPF1
WIPF2
YBX1
YLPM1
Entrez ID
10262
322
HPRD ID
12028
04087
Ensembl ID
ENSG00000143368
ENSG00000166313
Uniprot IDs
B3KUJ0
Q15427
B7Z4M9
O00213
PDB IDs
1X5T
5GVQ
5Z56
5Z57
5Z58
6AH0
6AHD
6QX9
6Y53
6Y5Q
7ABG
7ABH
7ABI
7DVQ
7EVO
7ONB
7QTT
7VPX
8CH6
8H6E
8H6J
8H6K
8H6L
8HK1
8I0P
8I0R
8I0S
8I0T
8I0U
8I0V
8QO9
8QXD
8QZS
8R08
8R09
8R0A
8R0B
8RM5
8Y7E
2E45
2HO2
2IDH
2OEI
3D8D
3D8E
3D8F
3DXC
3DXD
3DXE
5NQH
Enriched GO Terms of Interacting Partners
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MiRNA-mediated Post-transcriptional Gene Silencing
Regulatory NcRNA-mediated Post-transcriptional Gene Silencing
Post-transcriptional Gene Silencing
MRNA Base-pairing Post-transcriptional Repressor Activity
RISC Complex
Regulatory NcRNA-mediated Gene Silencing
Post-transcriptional Regulation Of Gene Expression
MiRNA-mediated Gene Silencing By Inhibition Of Translation
Negative Regulation Of Gene Expression
MRNA 3'-UTR Binding
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Biosynthetic Process
Negative Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Translation
Negative Regulation Of Metabolic Process
Extracellular Vesicle
MiRNA-mediated Gene Silencing By MRNA Destabilization
Regulation Of Macromolecule Metabolic Process
Regulation Of Gene Expression
Regulation Of Metabolic Process
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Translation
Regulation Of MRNA Metabolic Process
MRNA Destabilization
RNA Destabilization
Negative Regulation Of Cell Migration
Negative Regulation Of Cell Motility
Negative Regulation Of Angiogenesis
Positive Regulation Of MRNA Catabolic Process
Negative Regulation Of Vasculature Development
Negative Regulation Of Locomotion
Positive Regulation Of MRNA Metabolic Process
Regulation Of Angiogenesis
Regulation Of Vasculature Development
Regulation Of RNA Stability
Regulation Of MRNA Stability
Negative Regulation Of Vascular Endothelial Growth Factor Production
Negative Regulation Of Cytokine Production
Negative Regulation Of Protein Metabolic Process
Negative Regulation Of Developmental Process
Negative Regulation Of Multicellular Organismal Process
Regulation Of Blood Vessel Endothelial Cell Migration
Regulation Of Sprouting Angiogenesis
MRNA Processing
Negative Regulation Of Signal Transduction
Regulation Of Cell Migration
Regulation Of Endothelial Cell Migration
Negative Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
Regulation Of Locomotion
Regulation Of Cell Motility
MRNA Metabolic Process
MRNA Processing
RNA Splicing
RNA Splicing, Via Transesterification Reactions
MRNA Splicing, Via Spliceosome
RNA Processing
Nucleic Acid Binding
RNA Metabolic Process
RNA Binding
Spliceosomal Complex
Spliceosomal Complex Assembly
Nucleic Acid Metabolic Process
U2-type Prespliceosome Assembly
U2 SnRNP
U2-type Spliceosomal Complex
Actin Polymerization Or Depolymerization
Nucleus
Nucleobase-containing Compound Metabolic Process
Protein-containing Complex Assembly
Nuclear Speck
Protein-RNA Complex Assembly
SH3 Domain Binding
MRNA Binding
Catalytic Step 2 Spliceosome
Protein-containing Complex Organization
U12-type Spliceosomal Complex
U2-type Precatalytic Spliceosome
Cellular Component Assembly
Regulation Of Primary Metabolic Process
Nucleoplasm
MRNA 3'-splice Site Recognition
Macromolecule Metabolic Process
Regulation Of Nucleobase-containing Compound Metabolic Process
Actin Filament Organization
Regulation Of RNA Metabolic Process
Regulation Of DNA-templated Transcription
Positive Regulation Of Cellular Component Organization
Regulation Of RNA Biosynthetic Process
Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Macromolecule Metabolic Process
Actin Binding
Alternative MRNA Splicing, Via Spliceosome
Profilin Binding
Negative Regulation Of Metabolic Process
Regulation Of RNA Splicing
SCAR Complex
Positive Regulation Of Macromolecule Metabolic Process
Regulation Of Cellular Component Organization
Lamellipodium
Regulation Of Macromolecule Biosynthetic Process
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Tagcloud (Intersection)
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