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SF3B4 and TCERG1
Number of citations of the paper that reports this interaction (PubMedID
15456888
)
53
Data Source:
BioGRID
(affinity chromatography technology)
HPRD
(in vitro)
SF3B4
TCERG1
Description
splicing factor 3b subunit 4
transcription elongation regulator 1
Image
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Spliceosomal Complex
U2-type Spliceosomal Complex
U2 SnRNP
U12-type Spliceosomal Complex
U2-type Precatalytic Spliceosome
Precatalytic Spliceosome
Nucleus
Nucleoplasm
Nuclear Speck
Molecular Function
Nucleic Acid Binding
RNA Binding
Protein Binding
Splicing Factor Binding
Transcription Elongation Factor Activity
Transcription Coregulator Activity
Transcription Coactivator Activity
Transcription Corepressor Activity
RNA Binding
Protein Binding
Identical Protein Binding
Ubiquitin-like Protein Conjugating Enzyme Binding
RNA Polymerase II-specific DNA-binding Transcription Factor Binding
RNA Polymerase Binding
Biological Process
RNA Splicing, Via Transesterification Reactions
MRNA Splicing, Via Spliceosome
MRNA Processing
RNA Splicing
U2-type Prespliceosome Assembly
Negative Regulation Of Transcription By RNA Polymerase II
MRNA Processing
RNA Splicing
Positive Regulation Of Transcription Elongation By RNA Polymerase II
Negative Regulation Of Transcription Elongation By RNA Polymerase II
Positive Regulation Of Transcription By RNA Polymerase II
Pathways
mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway
mRNA Splicing - Major Pathway
Drugs
Diseases
GWAS
Anthropometric traits (
30166351
)
Anthropometric traits (multi-trait analysis) (
30166351
)
Birth length (
25281659
)
Body fat distribution (leg fat ratio) (
30664634
)
Body fat distribution (trunk fat ratio) (
30664634
)
Height (
18391951
20881960
31562340
)
Infant length (
25281659
)
Waist circumference adjusted for BMI (adjusted for smoking behaviour) (
28443625
)
Waist circumference adjusted for BMI (joint analysis main effects and smoking interaction) (
28443625
)
Waist circumference adjusted for BMI in non-smokers (
28443625
)
Waist circumference adjusted for body mass index (
25673412
)
Response to cognitive-behavioural therapy in anxiety disorder (
31123309
)
Interacting Genes
115 interacting genes:
APBB1
BAG3
BAG4
BAIAP2
BMPR1A
CD2BP2
CHERP
CPSF7
CTTN
CWF19L2
DDX17
DDX42
DMRTB1
EEF1A1
EFTUD2
EWSR1
FARSB
FKBP1A
FRK
GRB2
HNRNPD
HNRNPF
HNRNPH1
HNRNPUL1
HSPB7
ILF3
ITSN1
KHDRBS2
MAPK9
METTL17
MIR1-1
MIR106A
MIR106B
MIR107
MIR10B
MIR128-1
MIR128-2
MIR138-1
MIR138-2
MIR141
MIR145
MIR155
MIR15B
MIR16-1
MIR16-2
MIR17
MIR18B
MIR19A
MIR19B1
MIR19B2
MIR200A
MIR200B
MIR200C
MIR205
MIR20B
MIR21
MIR221
MIR222
MIR25
MIR29A
MIR29C
MIR31
MIR34A
MIR34B
MIR34C
MIR363
MIR429
MIR451A
MIR7-1
MIR7-3
MIR9-1
MIR92A1
MIR92A2
MIR93
MIRLET7A1
MIRLET7A2
MIRLET7A3
MIRLET7C
MIRLET7D
MIRLET7E
MIRLET7F1
MIRLET7G
MIRLET7I
NCK2
NUB1
OGT
PPP1R16B
PRPF6
QARS1
RAMAC
RBFOX2
RBM10
RBM39
RBM4
RPP25
SEC24D
SF1
SF3B2
SFPQ
SRSF6
SS18L1
SUMO4
TCAF1
TCERG1
TFG
TLE5
TRAF4
UBASH3A
WBP4
WDR4
WDR77
WHR1
ZCCHC10
ZNF3
ZNF48
56 interacting genes:
ABI1
AURKA
BARD1
CEBPA
CHAF1A
CHD3
CYFIP1
CYFIP2
DIAPH1
DIAPH2
DNAJB9
ESR1
EVL
FANCA
FANCC
FMNL1
GRB2
HNRNPH1
HNRNPK
HNRNPM
HNRNPU
HSPA1A
HSPA5
HSPA8
HTT
JUNB
LUC7L
NONO
NPM1
NUDT21
PCBP1
PIAS4
POLR2A
PSPC1
RNF10
RUNX1
SETDB1
SF1
SF3A1
SF3A2
SF3A3
SF3B1
SF3B2
SF3B3
SF3B4
SFPQ
SRSF1
SUMO2
TPM4
U2AF2
UBE2I
WAS
WASF2
WBP4
WIPF2
WWOX
Entrez ID
10262
10915
HPRD ID
12028
10393
Ensembl ID
ENSG00000143368
ENSG00000113649
Uniprot IDs
B3KUJ0
Q15427
A0A7P0T8N8
O14776
PDB IDs
1X5T
5GVQ
5Z56
5Z57
5Z58
6AH0
6AHD
6QX9
6Y53
6Y5Q
7ABG
7ABH
7ABI
7DVQ
7EVO
7ONB
7QTT
7VPX
8CH6
8H6E
8H6J
8H6K
8H6L
8HK1
8I0P
8I0R
8I0S
8I0T
8I0U
8I0V
8QO9
8QXD
8QZS
8R08
8R09
8R0A
8R0B
8RM5
8Y7E
2DK7
2DOD
2DOE
2DOF
2E71
2KIQ
2KIS
2MW9
2MWA
2MWB
2MWD
2MWE
2MWF
2N4R
2N4S
2N4T
2N4U
2N4V
2N4W
2NNT
3HFH
3Q1I
4FQG
7ABF
7ABG
8Q7N
8QO9
Enriched GO Terms of Interacting Partners
?
MiRNA-mediated Post-transcriptional Gene Silencing
Regulatory NcRNA-mediated Post-transcriptional Gene Silencing
Post-transcriptional Gene Silencing
MRNA Base-pairing Post-transcriptional Repressor Activity
RISC Complex
Regulatory NcRNA-mediated Gene Silencing
Post-transcriptional Regulation Of Gene Expression
MiRNA-mediated Gene Silencing By Inhibition Of Translation
Negative Regulation Of Gene Expression
MRNA 3'-UTR Binding
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Biosynthetic Process
Negative Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Translation
Negative Regulation Of Metabolic Process
Extracellular Vesicle
MiRNA-mediated Gene Silencing By MRNA Destabilization
Regulation Of Macromolecule Metabolic Process
Regulation Of Gene Expression
Regulation Of Metabolic Process
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Translation
Regulation Of MRNA Metabolic Process
MRNA Destabilization
RNA Destabilization
Negative Regulation Of Cell Migration
Negative Regulation Of Cell Motility
Negative Regulation Of Angiogenesis
Positive Regulation Of MRNA Catabolic Process
Negative Regulation Of Vasculature Development
Negative Regulation Of Locomotion
Positive Regulation Of MRNA Metabolic Process
Regulation Of Angiogenesis
Regulation Of Vasculature Development
Regulation Of RNA Stability
Regulation Of MRNA Stability
Negative Regulation Of Vascular Endothelial Growth Factor Production
Negative Regulation Of Cytokine Production
Negative Regulation Of Protein Metabolic Process
Negative Regulation Of Developmental Process
Negative Regulation Of Multicellular Organismal Process
Regulation Of Blood Vessel Endothelial Cell Migration
Regulation Of Sprouting Angiogenesis
MRNA Processing
Negative Regulation Of Signal Transduction
Regulation Of Cell Migration
Regulation Of Endothelial Cell Migration
Negative Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
Regulation Of Locomotion
Regulation Of Cell Motility
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
Spliceosomal Complex
RNA Splicing
MRNA Processing
MRNA Metabolic Process
RNA Binding
Catalytic Step 2 Spliceosome
Spliceosomal Complex Assembly
Nucleic Acid Metabolic Process
Nuclear Speck
Nucleoplasm
U2-type Prespliceosome Assembly
Nucleus
Nucleic Acid Binding
U2 SnRNP
RNA Metabolic Process
Nucleobase-containing Compound Metabolic Process
U2-type Spliceosomal Complex
U2-type Precatalytic Spliceosome
RNA Processing
Protein-containing Complex Assembly
Protein-containing Complex Organization
Protein-RNA Complex Assembly
Paraspeckles
Cellular Component Assembly
MRNA Splice Site Recognition
MRNA 3'-splice Site Recognition
U2-type Prespliceosome
Regulation Of RNA Splicing
SCAR Complex
Macromolecule Metabolic Process
Positive Regulation Of Metabolic Process
Nuclear Matrix
Regulation Of Gene Expression
Negative Regulation Of RNA Metabolic Process
Actin Binding
Positive Regulation Of Macromolecule Metabolic Process
Regulation Of Macromolecule Biosynthetic Process
Regulation Of RNA Metabolic Process
Regulation Of Metabolic Process
Negative Regulation Of MRNA Metabolic Process
Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Actin Polymerization Or Depolymerization
Alternative MRNA Splicing, Via Spliceosome
U12-type Spliceosomal Complex
MRNA Binding
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
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Tagcloud (Difference)
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Tagcloud (Intersection)
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