LSM5 and SMN1

  • Number of citations of the paper that reports this interaction (PMID 10851237)
  • 37
  • Data Source:
  • HPRD (in vitro)

LSM5

SMN1

Gene Name LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) survival of motor neuron 1, telomeric
Image No pdb structure
Gene Ontology Annotations Cellular Component
Molecular Function
Biological Process
Pathways
Drugs
Diseases
GWAS
  • Palmitic acid (16:0) plasma levels ( 23362303)
Protein-Protein Interactions 11 interactors: EXOSC5 HNRNPD LSM1 LSM2 LSM3 LSM6 LSM7 LSM8 SMN1 SNRPE SNRPF 136 interactors: A1BG A2M ACTB ACTL6B ADAMTS10 AGAP1 APLP1 ARFGAP1 ATP5B ATP6V1A BAG6 BCL2 C19orf60 CARHSP1 CCDC90B CENPB COIL COL4A2 COL4A5 COPS6 CPNE6 CRIP2 CSAD DDAH2 DDX20 DHX9 DMPK DOCK7 DUS2 DYNC1I1 EEF1A1 EIF3G EXT2 EZH2 FAM20C FBL FGB FLAD1 FUBP1 GAPDH GAR1 GDF9 GEMIN2 GEMIN5 GEMIN7 HADHB HIST3H3 HMGXB3 HNRNPR HNRNPU HNRNPUL1 IGHM ILF3 IMMT INPP5K JADE1 KDM1A KIF5A KLHL5 KMT2B KPNB1 LENG8 LRIF1 LSM1 LSM10 LSM11 LSM2 LSM3 LSM4 LSM5 LSM6 LSM7 MAST2 MED31 MKI67 MPP1 MRPL37 MSH2 NGFR NKIRAS2 NMT2 OSTF1 PDE4DIP PKM PLXNA3 POLR2A POP7 PSME1 QARS RBBP4 RBBP6 RBFOX2 RBM48 RN7SL1 RNU1-1 RNU2-1 RPL13 RPS2 RXRA SDF4 SEMA5B SETDB1 SMC5 SMN2 SNRPB SNRPD1 SNRPD2 SNRPD3 SNRPE SNUPN SP110 STRAP STXBP2 STXBP3 SULT1A3 SUMO3 SYNCRIP TAF1C TIAL1 TLE1 TMSB4X TP53 TRMT2A TUBA1A TUBB3 UCHL1 UNC119 USP4 WDR18 WDR73 WDYHV1 WIZ ZBTB16 ZNF431 ZRANB2 ZXDC
Entrez ID 23658 6606
HPRD ID 06285 02646
Ensembl ID ENSG00000106355 ENSG00000172062
Uniprot IDs Q9Y4Y9 B4DP61 Q16637
PDB IDs 1G5V 1MHN 2LEH 3S6N 4A4E 4A4G 4GLI
Enriched GO Terms of Interacting Partners?
Tagcloud ?
angles  arrange  assemble  building  heptameric  heteroheptameric  hexameric  incorporate  lsm1  lsm2  lsm23  lsm57  lsm6  lsm657  lsm7  monomers  nonetheless  plastic  pockets  preferences  pull  ring  sme  smf  smg  solved  spliceosomal 
atrophy  centromeric  compensate  copies  copy  degeneration  deletions  detectable  display  donor  easily  exon  fails  fatal  harbor  hindering  homozygous  infant  intragenic  italian  modifier  muscular  null  predictable  sma  smn2  splice  unusually  weakness 
Tagcloud (Difference) ?
angles  arrange  assemble  building  heptameric  heteroheptameric  hexameric  incorporate  lsm1  lsm2  lsm23  lsm57  lsm6  lsm657  lsm7  monomers  nonetheless  plastic  pockets  preferences  pull  ring  sme  smf  smg  solved  spliceosomal 
atrophy  centromeric  compensate  copies  copy  degeneration  deletions  detectable  display  donor  easily  exon  fails  fatal  harbor  hindering  homozygous  infant  intragenic  italian  modifier  muscular  null  predictable  sma  smn2  splice  unusually  weakness 
Tagcloud (Intersection) ?