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SMN1 and CCDC90B
Number of citations of the paper that reports this interaction (PMID
21900206
)
27
Data Source:
BioGRID
(two hybrid)
SMN1
CCDC90B
Gene Name
survival of motor neuron 1, telomeric
coiled-coil domain containing 90B
Image
No pdb structure
Gene Ontology Annotations
Cellular Component
Nucleus
Nucleoplasm
Spliceosomal Complex
Cytoplasm
Cytosol
Cajal Body
Z Disc
SMN Complex
SMN-Sm Protein Complex
Gemini Of Coiled Bodies
Mitochondrion
Integral Component Of Membrane
Molecular Function
RNA Binding
Protein Binding
Identical Protein Binding
Biological Process
Spliceosomal Complex Assembly
Spliceosomal SnRNP Assembly
Nervous System Development
Gene Expression
NcRNA Metabolic Process
Pathways
snRNP Assembly
Metabolism of non-coding RNA
Drugs
Diseases
GWAS
Protein-Protein Interactions
136 interactors:
A1BG
A2M
ACTB
ACTL6B
ADAMTS10
AGAP1
APLP1
ARFGAP1
ATP5B
ATP6V1A
BAG6
BCL2
C19orf60
CARHSP1
CCDC90B
CENPB
COIL
COL4A2
COL4A5
COPS6
CPNE6
CRIP2
CSAD
DDAH2
DDX20
DHX9
DMPK
DOCK7
DUS2
DYNC1I1
EEF1A1
EIF3G
EXT2
EZH2
FAM20C
FBL
FGB
FLAD1
FUBP1
GAPDH
GAR1
GDF9
GEMIN2
GEMIN5
GEMIN7
HADHB
HIST3H3
HMGXB3
HNRNPR
HNRNPU
HNRNPUL1
IGHM
ILF3
IMMT
INPP5K
JADE1
KDM1A
KIF5A
KLHL5
KMT2B
KPNB1
LENG8
LRIF1
LSM1
LSM10
LSM11
LSM2
LSM3
LSM4
LSM5
LSM6
LSM7
MAST2
MED31
MKI67
MPP1
MRPL37
MSH2
NGFR
NKIRAS2
NMT2
OSTF1
PDE4DIP
PKM
PLXNA3
POLR2A
POP7
PSME1
QARS
RBBP4
RBBP6
RBFOX2
RBM48
RN7SL1
RNU1-1
RNU2-1
RPL13
RPS2
RXRA
SDF4
SEMA5B
SETDB1
SMC5
SMN2
SNRPB
SNRPD1
SNRPD2
SNRPD3
SNRPE
SNUPN
SP110
STRAP
STXBP2
STXBP3
SULT1A3
SUMO3
SYNCRIP
TAF1C
TIAL1
TLE1
TMSB4X
TP53
TRMT2A
TUBA1A
TUBB3
UCHL1
UNC119
USP4
WDR18
WDR73
WDYHV1
WIZ
ZBTB16
ZNF431
ZRANB2
ZXDC
29 interactors:
AGR2
ANXA7
ARL15
BTBD2
CDKN2B
CDKN2C
DLEU1
DNM2
EIF2S2
FXYD6
KDM1A
LAMTOR1
NACA
NIPSNAP3A
PAFAH1B3
PCDHA4
PIN1
PNP
PRDX5
PSMD11
RGL2
RNF10
SAT1
SDHAF2
SERPINB9
SMN1
TAC3
TK1
TSC22D1
Entrez ID
6606
60492
HPRD ID
02646
14378
Ensembl ID
ENSG00000172062
ENSG00000137500
Uniprot IDs
B4DP61
Q16637
B3KP87
Q9GZT6
PDB IDs
1G5V
1MHN
2LEH
3S6N
4A4E
4A4G
4GLI
Enriched GO Terms of Interacting Partners
?
MRNA Processing
RNA Splicing
MRNA Metabolic Process
RNA Processing
RNA Splicing, Via Transesterification Reactions
MRNA Splicing, Via Spliceosome
RNA Metabolic Process
Spliceosomal SnRNP Assembly
Nucleobase-containing Compound Metabolic Process
Gene Expression
Cellular Nitrogen Compound Metabolic Process
Cellular Aromatic Compound Metabolic Process
Heterocycle Metabolic Process
Nitrogen Compound Metabolic Process
Cellular Metabolic Process
Ribonucleoprotein Complex Assembly
Ribonucleoprotein Complex Biogenesis
NcRNA Metabolic Process
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic
Cellular Macromolecular Complex Assembly
Histone MRNA Metabolic Process
Metabolic Process
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
Cellular Process
Nuclear-transcribed MRNA Catabolic Process
Posttranscriptional Regulation Of Gene Expression
Cellular Component Assembly
MRNA Catabolic Process
RNA Catabolic Process
CRD-mediated MRNA Stabilization
Regulation Of Protein Metabolic Process
Termination Of RNA Polymerase II Transcription
Regulation Of Cellular Protein Metabolic Process
DNA-templated Transcription, Termination
RNA Biosynthetic Process
MRNA 3'-end Processing
Regulation Of G1/S Transition Of Mitotic Cell Cycle
Regulation Of Cell Cycle G1/S Phase Transition
Transcription, DNA-templated
RNA 3'-end Processing
Regulation Of Mitotic Cell Cycle Phase Transition
Spliceosomal Complex Assembly
Negative Regulation Of Cellular Metabolic Process
Regulation Of Cell Cycle Phase Transition
Developmental Process
Regulation Of Metabolic Process
Cellular Macromolecule Catabolic Process
Cell Differentiation
Catabolic Process
Regulation Of Cell Proliferation
Developmental Process
System Development
Anatomical Structure Development
Mitotic Cell Cycle Phase Transition
Cell Cycle Phase Transition
Negative Regulation Of Cellular Protein Metabolic Process
Nucleoside Metabolic Process
Negative Regulation Of Protein Metabolic Process
Nucleotide Metabolic Process
Negative Regulation Of Apoptotic Process
Negative Regulation Of Programmed Cell Death
Negative Regulation Of Cell Death
Multicellular Organismal Development
Reactive Nitrogen Species Metabolic Process
Nucleobase-containing Small Molecule Metabolic Process
Regulation Of Catalytic Activity
Regulation Of Apoptotic Process
Regulation Of Cell Death
Regulation Of Cell Differentiation
Negative Regulation Of Cellular Metabolic Process
Negative Regulation Of Transcription From RNA Polymerase II Promoter Involved In Heart Development
Inosine Catabolic Process
Regulation Of Apoptosis Involved In Tissue Homeostasis
Regulation Of Primitive Erythrocyte Differentiation
Nicotinamide Riboside Catabolic Process
Fetal Process Involved In Parturition
Mitochondrial Electron Transport, Succinate To Ubiquinone
NAD Biosynthesis Via Nicotinamide Riboside Salvage Pathway
Negative Regulation Of Catalytic Activity
Positive Regulation Of Metabolic Process
Nitrogen Compound Metabolic Process
Negative Regulation Of Membrane Tubulation
Mucus Secretion
Spermidine Acetylation
Skeletal Muscle Cell Proliferation
Interleukin-2 Secretion
Urate Biosynthetic Process
Purine Nucleoside Metabolic Process
Positive Regulation Of Ubiquitin-protein Transferase Activity
Positive Regulation Of Ligase Activity
Cellular Nitrogen Compound Metabolic Process
Regulation Of Oxidoreductase Activity
Endosome Localization
Lung Goblet Cell Differentiation
Protein-FAD Linkage
Regulation Of Cholesterol Import
Putrescine Catabolic Process
Positive Regulation Of Skeletal Muscle Tissue Growth
Response To Stimulus
Tagcloud
?
atrophy
centromeric
compensate
copies
copy
degeneration
deletions
detectable
display
donor
easily
exon
fails
fatal
harbor
hindering
homozygous
infant
intragenic
italian
modifier
muscular
null
predictable
sma
smn2
splice
unusually
weakness
Tagcloud (Difference)
?
atrophy
centromeric
compensate
copies
copy
degeneration
deletions
detectable
display
donor
easily
exon
fails
fatal
harbor
hindering
homozygous
infant
intragenic
italian
modifier
muscular
null
predictable
sma
smn2
splice
unusually
weakness
Tagcloud (Intersection)
?