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DDX17 and SREK1
Number of citations of the paper that reports this interaction (PubMedID
14559993
)
73
Data Source:
HPRD
(two hybrid, in vitro, in vivo)
DDX17
SREK1
Description
DEAD-box helicase 17
splicing regulatory glutamic acid and lysine rich protein 1
Image
No pdb structure
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Nucleolus
Cytoplasm
Cytosol
Membrane
Nuclear Speck
Ribonucleoprotein Complex
Nucleus
Nucleoplasm
Spliceosomal Complex
Nuclear Speck
Molecular Function
Nucleotide Binding
Nucleic Acid Binding
Transcription Coactivator Activity
RNA Binding
RNA Helicase Activity
MRNA Binding
Helicase Activity
Protein Binding
ATP Binding
ATP-dependent Activity, Acting On RNA
Hydrolase Activity
ATP Hydrolysis Activity
Nucleic Acid Binding
RNA Binding
Protein Binding
Biological Process
Alternative MRNA Splicing, Via Spliceosome
Regulation Of Alternative MRNA Splicing, Via Spliceosome
Epithelial To Mesenchymal Transition
Immune System Process
Regulation Of Transcription By RNA Polymerase II
RRNA Processing
RNA Processing
MRNA Processing
RNA Splicing
MiRNA Metabolic Process
Estrogen Receptor Signaling Pathway
Androgen Receptor Signaling Pathway
Regulatory NcRNA-mediated Gene Silencing
Myoblast Differentiation
Positive Regulation Of Transcription By RNA Polymerase II
Defense Response To Virus
Regulation Of Skeletal Muscle Cell Differentiation
MRNA Processing
RNA Splicing
Pathways
SUMOylation of transcription cofactors
Drugs
Diseases
GWAS
Hip index (
34021172
)
Menopause (age at onset) (
26414677
)
Resting heart rate (
27798624
)
Sleep duration (
30846698
)
Logical memory (delayed recall) in mild cognitive impairment (
29274321
)
Systolic blood pressure (
30224653
)
Interacting Genes
49 interacting genes:
APBB1
APP
BYSL
CCDC187
CEBPA
CREBBP
CSNK2A1
DDX5
DDX6
DRC4
EGFR
ESR1
FBL
FOXP1
FXR2
GRB2
HADHB
HDAC1
HNRNPH1
HNRNPH3
HNRNPK
LNX1
NCOA1
NCOA2
NCOA3
OGT
PIN1
PRPF6
PTK6
PTPRD
RBM10
RBM14
RBM15
RBM4
RBM5
RBM7
SF1
SF3B4
SFPQ
SNCA
SNRNP70
SNRPA
SORBS3
SREK1
SUMO2
USP7
WBP11
WBP2
YWHAG
66 interacting genes:
ARL6IP4
CD8A
CKAP2
CSNK2A1
DDX17
DDX39B
DDX3X
DGKA
DGKD
EFTUD2
ELAVL1
GPRASP2
HNRNPA1
HNRNPA2B1
HNRNPA3
HNRNPC
HNRNPD
HNRNPH1
HNRNPK
HNRNPU
ILF2
MDM2
MRPL37
NAT10
NCL
NPM1
PABPC1
PABPC4
PARP1
PCBP3
PIN1
PRPF40A
RAB5C
RACK1
RBM10
RBM39
RBMX
SAFB
SF3A3
SF3B3
SFPQ
SH3GLB2
SNRPD1
SNRPD3
SRPK1
SRPK2
SRPK3
SRRM4
SRSF1
SRSF10
SRSF11
SRSF2
SRSF3
SRSF4
SRSF5
SRSF6
SRSF7
SRSF8
SSRP1
SUPT16H
TARBP1
THRAP3
TRA2B
TXLNA
YBX1
ZRANB2
Entrez ID
10521
140890
HPRD ID
10532
18043
Ensembl ID
ENSG00000100201
ENSG00000153914
Uniprot IDs
A0A5H1ZRQ2
Q59F66
Q92841
Q8WXA9
PDB IDs
6UV0
6UV1
6UV2
6UV3
6UV4
Enriched GO Terms of Interacting Partners
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Nucleoplasm
MRNA Metabolic Process
RNA Splicing
RNA Binding
RNA Metabolic Process
Nucleic Acid Binding
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
MRNA Processing
Nucleus
Nucleic Acid Metabolic Process
Macromolecule Metabolic Process
Spliceosomal Complex
Regulation Of RNA Splicing
RNA Processing
Regulation Of RNA Metabolic Process
Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of MRNA Splicing, Via Spliceosome
Regulation Of Primary Metabolic Process
Regulation Of Gene Expression
Regulation Of Macromolecule Biosynthetic Process
Nucleobase-containing Compound Metabolic Process
Negative Regulation Of Macromolecule Metabolic Process
Rhythmic Process
Regulation Of MRNA Processing
Positive Regulation Of Metabolic Process
Positive Regulation Of Transcription By RNA Polymerase II
Negative Regulation Of Metabolic Process
Regulation Of Macromolecule Metabolic Process
Positive Regulation Of Biosynthetic Process
Positive Regulation Of Macromolecule Metabolic Process
Regulation Of Transcription By RNA Polymerase II
MRNA Binding
Regulation Of Metabolic Process
Positive Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Macromolecule Biosynthetic Process
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
Positive Regulation Of RNA Metabolic Process
Chromatin Organization
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Negative Regulation Of Biosynthetic Process
Regulation Of MRNA Metabolic Process
Nuclear Speck
Chromatin Remodeling
Regulation Of Alternative MRNA Splicing, Via Spliceosome
Negative Regulation Of Protein Catabolic Process
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of RNA Biosynthetic Process
Positive Regulation Of DNA-templated Transcription
RNA Splicing
RNA Binding
MRNA Processing
MRNA Metabolic Process
RNA Processing
Regulation Of MRNA Processing
Regulation Of MRNA Metabolic Process
RNA Metabolic Process
Regulation Of MRNA Splicing, Via Spliceosome
Nucleic Acid Binding
Regulation Of RNA Splicing
RNA Splicing, Via Transesterification Reactions
Nucleic Acid Metabolic Process
MRNA Splicing, Via Spliceosome
Nucleobase-containing Compound Metabolic Process
Regulation Of Alternative MRNA Splicing, Via Spliceosome
MRNA Binding
Nuclear Speck
Negative Regulation Of MRNA Metabolic Process
Catalytic Step 2 Spliceosome
Spliceosomal Complex
Ribonucleoprotein Complex
Nucleoplasm
Nucleus
Macromolecule Metabolic Process
Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of RNA Metabolic Process
Negative Regulation Of MRNA Splicing, Via Spliceosome
Negative Regulation Of RNA Splicing
Regulation Of Primary Metabolic Process
MRNA Stabilization
Regulation Of Gene Expression
Spliceosomal Complex Assembly
Protein-RNA Complex Assembly
Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of MRNA Catabolic Process
RNA Stabilization
Regulation Of Macromolecule Metabolic Process
Negative Regulation Of RNA Catabolic Process
Regulation Of MRNA Stability
Regulation Of RNA Stability
Alternative MRNA Splicing, Via Spliceosome
Post-transcriptional Regulation Of Gene Expression
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Telomere Maintenance Via Telomere Lengthening
Regulation Of Metabolic Process
Negative Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Gene Expression
Pre-mRNA Binding
Negative Regulation Of Macromolecule Biosynthetic Process
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