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MAP1LC3B and SNU13
Number of citations of the paper that reports this interaction (PubMedID
21988832
)
38
Data Source:
BioGRID
(two hybrid)
MAP1LC3B
SNU13
Description
microtubule associated protein 1 light chain 3 beta
small nuclear ribonucleoprotein 13
Image
GO Annotations
Cellular Component
Autophagosome Membrane
Cytoplasm
Mitochondrion
Autophagosome
Cytosol
Cytoskeleton
Microtubule
Axoneme
Endomembrane System
Membrane
Organelle Membrane
Cytoplasmic Vesicle
Mitochondrial Membrane
Dense Fibrillar Component
Nucleus
Nucleoplasm
Spliceosomal Complex
U4atac SnRNP
Nucleolus
Box C/D Methylation Guide SnoRNP Complex
Small-subunit Processome
Protein-containing Complex
U4/U6 X U5 Tri-snRNP Complex
U2-type Precatalytic Spliceosome
Precatalytic Spliceosome
Ribonucleoprotein Complex
Molecular Function
Protein Binding
Phospholipid Binding
Microtubule Binding
Phosphatidylethanolamine Binding
Ubiquitin Protein Ligase Binding
Ceramide Binding
RNA Binding
Protein Binding
SnoRNA Binding
U4 SnRNA Binding
U4atac SnRNA Binding
U3 SnoRNA Binding
Box C/D Sno(s)RNA Binding
ATPase Binding
Biological Process
Autophagosome Assembly
Autophagy Of Mitochondrion
Mitophagy
Autophagy
Cellular Response To Nitrogen Starvation
Cellular Response To Starvation
Macroautophagy
Autophagosome Maturation
MRNA Splicing, Via Spliceosome
Box C/D SnoRNP Assembly
MRNA Processing
Single Fertilization
RNA Splicing
Maturation Of SSU-rRNA
Ribosome Biogenesis
Ribosomal Small Subunit Biogenesis
Pathways
Macroautophagy
PINK1-PRKN Mediated Mitophagy
TBC/RABGAPs
Receptor Mediated Mitophagy
Pexophagy
Translation of Replicase and Assembly of the Replication Transcription Complex
Translation of Replicase and Assembly of the Replication Transcription Complex
SARS-CoV-2 modulates autophagy
KEAP1-NFE2L2 pathway
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol
mRNA Splicing - Major Pathway
Drugs
(S)-3-phenyllactic acid
Anisomycin
Diseases
GWAS
General factor of neuroticism (
30867560
)
Major depressive disorder (
22472876
)
Metabolite levels (
23823483
)
Neuroticism (
29255261
)
Refractive error (
32231278
)
Appendicular lean mass (
33097823
)
Interacting Genes
97 interacting genes:
AAMP
ABTB3
ADD1
ADNP
AFTPH
AMBRA1
ANK2
APPL1
ARFGAP1
ATG13
ATG3
ATG4A
ATG4B
ATG4C
ATG4D
ATG7
BAG6
BIRC6
BNIP3
BRD3
BRD9
CAMSAP1
CARS2
CASP8
CCDC50
CCPG1
CCSER2
CDC37
CLTA
CUL3
DBI
DBN1
DNMT3B
DPPA4
EED
EPS8
EVA1A
FLCN
FUNDC1
GORASP2
HYPK
IRGQ
KBTBD7
KLHL5
KXD1
LUC7L2
MESD
MKRN1
MRFAP1
MRTFA
MTX1
MYBL2
NCOR1
NEDD4
NEK9
OPTN
PCNT
PLEKHM1
PRKCZ
PRUNE2
RAD1
RAP1GAP
RASAL3
RETREG1
RETREG2
RIC1
RIPOR1
RPLP1
SAMM50
SEM1
SEPTIN3
SMARCB1
SNCA
SNU13
SNX18
SPAG9
SQSTM1
STK3
STK36
TAF7
TBC1D17
TBC1D25
TBC1D5
TBC1D9
TBC1D9B
THAP7
TMOD3
TNIP1
TPPP
TRIM21
TRIM25
TRIM32
TTN
UPF2
USP10
VHL
WDR90
16 interacting genes:
CDKN2C
CHST1
GTF3C1
HSPB2
LRIF1
MAP1LC3B
NUFIP1
POLA2
PPIH
RAD17
RBM10
RHOU
SMN1
SMN2
SNW1
XRCC6
Entrez ID
81631
4809
HPRD ID
14358
03197
Ensembl ID
ENSG00000140941
ENSG00000100138
Uniprot IDs
Q658J6
Q9GZQ8
P55769
Q6FHM6
PDB IDs
1V49
2LUE
2N9X
2ZJD
3VTU
3VTV
3VTW
3WAO
3X0W
4WAA
5D94
5DCN
5GMV
5MS2
5MS5
5MS6
5V4K
5W9A
5XAC
5XAD
5XAE
6J04
6LAN
7ELG
7GA8
7GA9
7GAA
7GAB
7GAC
7GAD
7GAE
7GAF
7GAG
7GAH
7GAI
7GAJ
7GAK
7GAL
7GAM
7GAN
7GAO
7GAP
7GAQ
7GAR
7GAS
7GAU
8Q53
8Q7K
8YV6
1E7K
2JNB
2OZB
3JCR
3SIU
3SIV
5O9Z
6AH0
6AHD
6QW6
6QX9
7MQ8
7MQ9
7MQA
8H6E
8H6J
8H6K
8H6L
8Q7N
8QO9
8QOZ
8QPA
8QPB
8QPE
8QXD
8QZS
8R08
8R09
8R0A
8R0B
8RM5
8Y6O
Enriched GO Terms of Interacting Partners
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Autophagy
Autophagy Of Mitochondrion
Mitophagy
Macroautophagy
Autophagosome
Autophagosome Assembly
Autophagosome Organization
Nucleophagy
Organelle Organization
Regulation Of Autophagy
Vacuole Organization
Organelle Assembly
Piecemeal Microautophagy Of The Nucleus
Protein-phosphatidylethanolamide Deconjugating Activity
Microautophagy
Catabolic Process
Positive Regulation Of Autophagy
Protein Delipidation
Aggrephagy
Cellular Component Assembly
Establishment Of Protein Localization
Cytoplasm
Substrate Localization To Autophagosome
Intracellular Protein Localization
Protein Transport
Protein Binding
Positive Regulation Of Catabolic Process
Cytosol
Endoplasmic Reticulum-autophagosome Adaptor Activity
Cellular Localization
Establishment Of Localization In Cell
Regulation Of Protein Stability
Proteolysis Involved In Protein Catabolic Process
Cysteine-type Endopeptidase Activity
Regulation Of Cellular Component Organization
Response To Mitochondrial Depolarisation
Proteolysis
Regulation Of Organelle Organization
Regulation Of Macroautophagy
Protein Monoubiquitination
GTPase Activator Activity
Ubiquitin-dependent Protein Catabolic Process
Modification-dependent Protein Catabolic Process
Positive Regulation Of Macroautophagy
Phagophore Assembly Site
Protein Polyubiquitination
Protein Modification By Small Protein Conjugation
Protein Ubiquitination
Protein Catabolic Process
Regulation Of Cell Projection Assembly
RNA Splicing, Via Transesterification Reactions
Nucleic Acid Metabolic Process
RNA Splicing
SMN Complex
MRNA Processing
Gemini Of Cajal Bodies
RNA Processing
Nucleobase-containing Compound Metabolic Process
Nucleoplasm
RNA Metabolic Process
SMN-Sm Protein Complex
DNA-templated Transcription Termination
Nuclear Retinoic Acid Receptor Binding
MRNA Metabolic Process
Nuclear Matrix
Nucleus
Chromosome, Telomeric Region
Rad17 RFC-like Complex
Spliceosomal Complex Assembly
Protein-RNA Complex Assembly
Spliceosomal SnRNP Assembly
Vascular Associated Smooth Muscle Cell Apoptotic Process
Negative Regulation Of Ribosomal Large Subunit Export From Nucleus
MRNA Splicing, Via Spliceosome
Nucleolus
Cajal Body
RNA Binding
Keratan Sulfotransferase Activity
DNA End Binding
Ku70:Ku80 Complex
Cytoplasmic Ribonucleoprotein Granule
Smooth Muscle Cell Apoptotic Process
U4/U6 SnRNP
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Tagcloud (Difference)
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Tagcloud (Intersection)
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