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CHERP and PRPF40A
Number of citations of the paper that reports this interaction (PubMedID
22365833
)
0
Data Source:
BioGRID
(two hybrid, two hybrid)
CHERP
PRPF40A
Description
calcium homeostasis endoplasmic reticulum protein
pre-mRNA processing factor 40A
Image
No pdb structure
GO Annotations
Cellular Component
Nucleoplasm
Cytoplasm
Endoplasmic Reticulum
Membrane
Sarcoplasmic Reticulum Membrane
Perinuclear Region Of Cytoplasm
Nucleus
Nucleoplasm
U1 SnRNP
Membrane
Nuclear Matrix
Nuclear Speck
U2-type Prespliceosome
Molecular Function
Nucleic Acid Binding
RNA Binding
Protein Binding
Transmembrane Transporter Binding
RNA Binding
Protein Binding
Biological Process
RNA Processing
Intracellular Calcium Ion Homeostasis
Nervous System Development
Negative Regulation Of Cell Population Proliferation
Release Of Sequestered Calcium Ion Into Cytosol
Positive Regulation Of Calcineurin-NFAT Signaling Cascade
MRNA Splicing, Via Spliceosome
MRNA Processing
Cytoskeleton Organization
Regulation Of Cell Shape
RNA Splicing
Cell Migration
Regulation Of Cytokinesis
MRNA Cis Splicing, Via Spliceosome
Cell Division
Pathways
mRNA Splicing - Major Pathway
mRNA Splicing - Major Pathway
Drugs
Diseases
GWAS
Heel bone mineral density (
30598549
)
Memory dysfunction in frontotemporal lobe dementia (
29724592
)
Metabolite levels (
23823483
)
Pulse pressure (
30224653
)
Refractive error (
32231278
)
Interacting Genes
48 interacting genes:
ADAMTSL4
AGGF1
APBB1
ARGLU1
C1orf94
CCAR1
CLK3
EWSR1
FASTK
FIGN
FRA10AC1
HNRNPH3
KRTAP11-1
LASP1
LUC7L
MAGED1
MECOM
MIR106B
MIR200C
MIR363
MIRLET7A2
MIRLET7C
MIRLET7D
MIRLET7E
MIRLET7G
MIRLET7I
PPIL4
PRPF38A
PRPF40A
RACK1
RBFOX2
RBM23
RBM39
RBM7
RNPS1
SART1
SAXO1
SF3B4
SNRNP27
SNRNP70
SORBS3
SRPK1
SRPK2
TLE3
TTC14
U2AF1
USP54
WBP4
132 interacting genes:
ABI1
AKAP8L
APBB1IP
ARFGEF2
ASXL2
ATAD3A
BAG6
BEND7
BRD4
CAP2
CCNL1
CCT2
CCT4
CCT7
CDK12
CDK13
CHD3
CHERP
CPSF6
CT45A1
CUL1
CYFIP1
CYFIP2
DAAM1
DDIT4L
DHX15
DHX8
DHX9
DIAPH1
DZIP1
DZIP1L
ENAH
ERG
EVL
FASLG
FMN1
FMNL1
FMNL2
FMNL3
FN1
FNBP4
FRA10AC1
GAPDH
HIPK1
HNRNPF
HNRNPK
HNRNPU
HNRNPUL1
HSPB1
HSPG2
HTT
IL1RAP
KMT2B
LARP7
LTBP3
MAP1LC3A
MECP2
MMP11
NCKAP1L
NKAP
NKAPD1
NONO
PCBP2
PDCD7
PECAM1
PFKL
PIAS1
PIAS3
PIAS4
PICK1
PPIG
PRKAR1A
PSG5
PTBP1
PTPRF
RBM39
RBMX2
RCC2
RLF
RNF10
RPL4
RPLP0
SDCBP
SDCBP2
SDK1
SERPINB9
SF1
SF3A1
SF3A2
SF3A3
SF3B2
SF3B3
SFPQ
SMAD4
SNIP1
SNRNP70
SON
SPMIP2
SREK1
SREK1IP1
SRPK2
STIM2
TCEAL9
TMEM132D
U2AF1
U2AF2
U2SURP
UBE2I
UBE2K
UBQLN1
UBQLN2
UBQLN4
UBR4
USP7
VASP
VCL
WAS
WASF2
WASL
WBP11
WBP4
WIPF1
XRCC6
YBX1
YLPM1
YWHAG
ZCCHC10
ZCCHC8
ZFHX3
ZHX1
ZNF341
ZNF451
Entrez ID
10523
55660
HPRD ID
13051
10995
Ensembl ID
ENSG00000085872
ENSG00000196504
Uniprot IDs
Q8IWX8
A0A7N4I394
A0A8Q3SIG7
A0A8V8TM61
F5H578
O75400
PDB IDs
1UZC
1YWI
1YWJ
1ZR7
2CQN
2DYF
2KZG
2L5F
2L9V
2LKS
8PXW
8PXX
Enriched GO Terms of Interacting Partners
?
RNA Splicing
MRNA Processing
Regulation Of RNA Splicing
Regulation Of MRNA Metabolic Process
MRNA Metabolic Process
MRNA Splicing, Via Spliceosome
RNA Processing
RNA Splicing, Via Transesterification Reactions
RNA Binding
Regulation Of MRNA Splicing, Via Spliceosome
MiRNA-mediated Post-transcriptional Gene Silencing
Nucleic Acid Binding
Regulatory NcRNA-mediated Post-transcriptional Gene Silencing
Nuclear Speck
Regulation Of MRNA Processing
RISC Complex
Post-transcriptional Gene Silencing
MRNA Base-pairing Post-transcriptional Repressor Activity
Regulatory NcRNA-mediated Gene Silencing
RNA Metabolic Process
Spliceosomal Complex
RS Domain Binding
U1 SnRNP Binding
Post-transcriptional Regulation Of Gene Expression
Regulation Of Gene Expression
MiRNA-mediated Gene Silencing By MRNA Destabilization
Regulation Of Macromolecule Biosynthetic Process
Nucleic Acid Metabolic Process
MRNA Cis Splicing, Via Spliceosome
U2-type Precatalytic Spliceosome
U2-type Prespliceosome
Negative Regulation Of Macromolecule Biosynthetic Process
U1 SnRNP
Precatalytic Spliceosome
Negative Regulation Of Biosynthetic Process
Negative Regulation Of Macromolecule Metabolic Process
Regulation Of Alternative MRNA Splicing, Via Spliceosome
Positive Regulation Of MRNA Metabolic Process
Nucleoplasm
Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Metabolic Process
Negative Regulation Of Interleukin-6-mediated Signaling Pathway
Extracellular Vesicle
Nucleobase-containing Compound Metabolic Process
MRNA Destabilization
RNA Destabilization
Regulation Of MRNA Stability
Regulation Of RNA Metabolic Process
Protein-RNA Complex Assembly
Negative Regulation Of Gene Expression
RNA Splicing
MRNA Processing
MRNA Metabolic Process
RNA Processing
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
RNA Binding
Nuclear Speck
Nucleic Acid Binding
Spliceosomal Complex
Nucleoplasm
Nucleus
Spliceosomal Complex Assembly
RNA Metabolic Process
U2 SnRNP
Catalytic Step 2 Spliceosome
Nucleic Acid Metabolic Process
U2-type Prespliceosome Assembly
Actin Binding
U2-type Precatalytic Spliceosome
Profilin Binding
SCAR Complex
Cellular Component Assembly
Actin Polymerization Or Depolymerization
Regulation Of RNA Splicing
Nucleobase-containing Compound Metabolic Process
Ribonucleoprotein Complex
MRNA 3'-splice Site Recognition
Regulation Of MRNA Processing
Regulation Of MRNA Splicing, Via Spliceosome
Macromolecule Metabolic Process
Regulation Of Primary Metabolic Process
Protein-RNA Complex Assembly
Actin Filament-based Process
Positive Regulation Of Protein Localization To Cajal Body
Positive Regulation Of Metabolic Process
Protein Binding
Alternative MRNA Splicing, Via Spliceosome
U12-type Spliceosomal Complex
Regulation Of Macromolecule Metabolic Process
PML Body
SUMO Ligase Activity
Cytosol
U2-type Spliceosomal Complex
Positive Regulation Of Macromolecule Metabolic Process
Actin Cytoskeleton Organization
Focal Adhesion
Regulation Of Metabolic Process
U2-type Prespliceosome
CRD-mediated MRNA Stability Complex
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