PRPF40A and VCL

Number of citations of the paper that reports this interaction (PMID 15231748)
65

Data Source:
BioGRID (two hybrid)
HPRD (two hybrid)

		PRPF40A	VCL
Gene Name		PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	vinculin
Image
Gene Ontology Annotations	Cellular Component	Nucleoplasm Cytoplasm Membrane Nuclear Matrix Nuclear Speck	Extracellular Region Cytosol Cytoskeleton Plasma Membrane Cell-cell Junction Adherens Junction Cell-cell Adherens Junction Fascia Adherens Focal Adhesion Actin Cytoskeleton Cell-substrate Junction Vesicle Costamere Protein Complex Extracellular Vesicular Exosome
	Molecular Function	Protein Binding Poly(A) RNA Binding Proline-rich Region Binding	Dystroglycan Binding Actin Binding Structural Molecule Activity Protein Binding Beta-catenin Binding Alpha-catenin Binding Cadherin Binding
	Biological Process	MRNA Processing Cytoskeleton Organization Cell Cycle Regulation Of Cell Shape RNA Splicing Cell Migration Regulation Of Cytokinesis Cell Division	Morphogenesis Of An Epithelium Platelet Degranulation Movement Of Cell Or Subcellular Component Muscle Contraction Cell Adhesion Cell-matrix Adhesion Blood Coagulation Lamellipodium Assembly Platelet Activation Negative Regulation Of Cell Migration Adherens Junction Assembly Protein Localization To Cell Surface Apical Junction Assembly Axon Extension Platelet Aggregation Epithelial Cell-cell Adhesion
Pathways			Response to elevated platelet cytosolic Ca2+ Smooth Muscle Contraction Platelet degranulation Platelet activation, signaling and aggregation
Drugs
Diseases
GWAS			Primary tooth development (number of teeth) ( 23704328) Primary tooth development (time to first tooth eruption) ( 23704328)
Protein-Protein Interactions		120 interactors: ABI1 AKAP8L APBB1IP ARFGEF2 ASXL2 ATAD3A BAG6 BRD4 CAP2 CCT2 CCT4 CCT7 CDK12 CDK13 CHD3 CHERP CPSF6 CSNK2A1 CUL1 CYFIP1 CYFIP2 DAAM1 DDX46 DHX15 DHX8 DHX9 DIAPH1 ENAH ERG EVL FASLG FMN1 FMNL1 FMNL2 FMNL3 FN1 FNBP4 FRA10AC1 GAPDH HIPK1 HNRNPF HNRNPK HNRNPU HNRNPUL1 HSPG2 HTT IL1RAP KMT2B LARP7 LTBP3 MAP1LC3A MECP2 MMP11 NCKAP1L NKAP NONO PCBP2 PDCD7 PECAM1 PFKL PIAS1 PIAS3 PIAS4 PPIG PRKAR1A PSG5 PTPRF RBM39 RBMX2 RCC2 RLF RPL4 RPLP0 SDCBP SDCBP2 SDK1 SERPINB9 SF1 SF3A1 SF3A2 SF3A3 SF3B1 SF3B2 SF3B3 SF3B4 SFPQ SMAD4 SNIP1 SNRNP70 SON SRPK2 STIM2 U2AF1 U2AF2 U2SURP UBE2I UBE2K UBQLN1 UBQLN2 UBQLN4 UBR4 VASP VCL WAS WASF2 WASL WBP11 WBP4 WBP5 WIPF1 XRCC6 YBX1 YLPM1 YWHAG ZCCHC10 ZCCHC8 ZFHX3 ZHX1 ZNF341 ZNF451	27 interactors: ABI2 ACTA1 ACTN1 C19orf57 CDH1 CLTC CORO2B CTNNA1 GSN NRAP PKD1 PRKCA PRPF40A PSME1 PTK2 PXN RAVER1 SELE SORBS1 SORBS2 SRC TEKT1 TGFB1I1 TLN1 TRIP6 TUBA1A VASP
Entrez ID		55660	7414
HPRD ID		10995	01900
Ensembl ID		ENSG00000196504	ENSG00000035403
Uniprot IDs		O75400 Q05C41	B3KXA2 P18206
PDB IDs		1UZC 1YWI 1YWJ 1ZR7 2CQN 2DYF 2KZG 2L5F 2L9V 2LKS	1RKC 1RKE 1SYQ 1TR2 1YDI 2GWW 2HSQ 2IBF 3H2U 3H2V 3MYI 3RF3 3S90 3TJ5 3TJ6 3VF0 4DJ9 4EHP
Enriched GO Terms of Interacting Partners?		RNA Splicing RNA Processing MRNA Processing MRNA Metabolic Process MRNA Splicing, Via Spliceosome RNA Splicing, Via Transesterification Reactions RNA Metabolic Process Gene Expression Nucleobase-containing Compound Metabolic Process Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Cellular Nitrogen Compound Metabolic Process Nitrogen Compound Metabolic Process Cellular Process Cellular Metabolic Process Cellular Component Assembly Actin Cytoskeleton Organization MRNA 3'-splice Site Recognition Actin Polymerization Or Depolymerization Actin Filament-based Process Cytoskeleton Organization RNA Biosynthetic Process Regulation Of Organelle Organization Transcription, DNA-templated Organelle Organization Regulation Of Metabolic Process Regulation Of Cellular Process Regulation Of Cellular Component Organization CRD-mediated MRNA Stabilization Regulation Of Gene Expression Positive Regulation Of Organelle Organization Regulation Of Cellular Protein Metabolic Process Positive Regulation Of Arp2/3 Complex-mediated Actin Nucleation Positive Regulation Of Cytoskeleton Organization Positive Regulation Of Actin Nucleation Regulation Of Protein Metabolic Process Protein Sumoylation Immune Response-activating Cell Surface Receptor Signaling Pathway Regulation Of RNA Splicing Cell Differentiation Negative Regulation Of Cellular Metabolic Process Actin Filament Organization Regulation Of Transcription From RNA Polymerase II Promoter Negative Regulation Of Gene Expression Multicellular Organismal Development Spliceosomal Complex Assembly Regulation Of Nitrogen Compound Metabolic Process Rhythmic Process Regulation Of RNA Metabolic Process Developmental Process	Cytoskeleton Organization Cell Junction Assembly Cell-cell Junction Organization Actin Filament-based Process Organelle Organization Adherens Junction Organization Actin Filament Organization Actin Cytoskeleton Organization Cell Adhesion Cellular Component Assembly Vascular Endothelial Growth Factor Receptor Signaling Pathway Cell-substrate Junction Assembly Regulation Of Cellular Component Organization Regulation Of Cellular Component Movement Focal Adhesion Assembly Signal Complex Assembly Cell-cell Junction Assembly Cell-substrate Adhesion Movement Of Cell Or Subcellular Component Adherens Junction Assembly Regulation Of Cell Motility Positive Regulation Of Signal Transduction Regulation Of Locomotion Response To Organic Substance Response To Wounding Cell-matrix Adhesion Positive Regulation Of Cell Migration Positive Regulation Of Cell Motility Cell Projection Organization Cell Differentiation Positive Regulation Of Transferase Activity Positive Regulation Of Cellular Component Movement Positive Regulation Of Locomotion Anatomical Structure Morphogenesis Regulation Of Body Fluid Levels Platelet Activation Regulation Of Cell Migration Wound Healing Enzyme Linked Receptor Protein Signaling Pathway Positive Regulation Of Protein Modification Process Locomotion Blood Coagulation Transmembrane Receptor Protein Tyrosine Kinase Signaling Pathway Hemostasis Cellular Response To Stimulus Protein Complex Assembly Cell Development Cellular Response To Organonitrogen Compound Integrin-mediated Signaling Pathway Cellular Response To Organic Substance
Tagcloud ?		arginine arid3b arnt2 ascribed aspartate catabolism clmn defining deregulated ectopic fads1 focusing fth1 kpna2 lphn2 missense pard6b pde4c pias2 proline pygl regardless repressor reprogramming rhobtb2 seq transcriptome verifying xenobiotic	34a 34c analyse chimeras crick destabilizing differs fkbp8 implement micrornas mir mirna nucleotides observe overlap overlapping pairing perfect preferential psilac raising repress repressed resource seed subsets untranslated want watson
Tagcloud (Difference) ?		arginine arid3b arnt2 ascribed aspartate catabolism clmn defining deregulated ectopic fads1 focusing fth1 kpna2 lphn2 missense pard6b pde4c pias2 proline pygl regardless repressor reprogramming rhobtb2 seq transcriptome verifying xenobiotic	34a 34c analyse chimeras crick destabilizing differs fkbp8 implement micrornas mir mirna nucleotides observe overlap overlapping pairing perfect preferential psilac raising repress repressed resource seed subsets untranslated want watson
Tagcloud (Intersection) ?