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YTHDC1 and CLK2
Number of citations of the paper that reports this interaction (PubMedID
33961781
)
97
Data Source:
BioGRID
(two hybrid, affinity chromatography technology)
YTHDC1
CLK2
Description
YTH N6-methyladenosine RNA binding protein C1
CDC like kinase 2
Image
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Plasma Membrane
Nuclear Speck
Nucleus
Nucleoplasm
Nuclear Body
Nuclear Speck
Molecular Function
RNA Binding
MRNA Binding
Protein Binding
N6-methyladenosine-containing RNA Reader Activity
Nucleotide Binding
Protein Kinase Activity
Protein Serine/threonine Kinase Activity
Protein Serine/threonine/tyrosine Kinase Activity
Protein Tyrosine Kinase Activity
Protein Binding
ATP Binding
Kinase Activity
Transferase Activity
Identical Protein Binding
Protein Serine Kinase Activity
Biological Process
Regulation Of Alternative MRNA Splicing, Via Spliceosome
MRNA Splicing, Via Spliceosome
In Utero Embryonic Development
MRNA Splice Site Recognition
MRNA Processing
MRNA Export From Nucleus
Spermatogenesis
RNA Splicing
Dosage Compensation By Inactivation Of X Chromosome
Post-transcriptional Regulation Of Gene Expression
Regulation Of MRNA Splicing, Via Spliceosome
Primary Follicle Stage
MRNA Alternative Polyadenylation
Protein Phosphorylation
Response To Ionizing Radiation
Regulation Of RNA Splicing
Negative Regulation Of Gluconeogenesis
Protein Autophosphorylation
Pathways
Nuclear RNA decay
Drugs
Fostamatinib
Diseases
GWAS
Mean corpuscular hemoglobin (
32888494
)
Obesity-related traits (
23251661
)
Body fat distribution (leg fat ratio) (
30664634
)
Body fat distribution (trunk fat ratio) (
30664634
)
Brain morphology (min-P) (
32665545
)
Brain morphology (MOSTest) (
32665545
)
Cortical surface area (min-P) (
32665545
)
Cortical surface area (MOSTest) (
32665545
)
Cortical thickness (min-P) (
32665545
)
Cortical thickness (MOSTest) (
32665545
)
Crohn's disease (
28067908
)
Inflammatory bowel disease (
28067908
)
Subcortical volume (min-P) (
32665545
)
Subcortical volume (MOSTest) (
32665545
)
Interacting Genes
41 interacting genes:
ABL1
ADAMTS4
ANKRD28
CFH
CLK1
CLK2
CORO1A
DVL3
EDC4
EMD
FYN
GOLGA2
HNRNPK
KHDRBS1
KHDRBS2
KHDRBS3
KRT18
KRTAP10-6
LAMC3
LAMTOR5
LZTS2
PHF19
PICK1
PLG
PROSER2
RBMY1A1
RBMY1F
RBMY1J
RNPS1
SDCBP2
SEPTIN10
SOX13
SRC
SRPK1
SRPK2
SRSF1
SRSF2
TRA2A
TRA2B
TXK
VPS51
62 interacting genes:
AKT1
AP2M1
ASPSCR1
CACTIN
CLASRP
CLK1
CLK3
CPSF7
DDIT4L
ECE1
EHHADH
GMCL1
GTPBP2
KLHL2
LNX1
LUC7L
LUZP4
MRPL2
MRPL4
NIP7
NXF1
PATL1
PRM1
PRPF38A
PRPF6
PTPN1
RBM39
RBM6
RNF8
RNPS1
RSRP1
SDCBP
SNRNP27
SRPK2
SRRM1
SRSF1
SRSF10
SRSF8
TACC2
TRIM27
TRIM50
U2AF1
UBE2I
UBL5
YTHDC1
YTHDF1
YWHAG
ZNF136
ZNF263
ZNF317
ZNF394
ZNF398
ZNF436
ZNF440
ZNF473
ZNF491
ZNF558
ZNF764
ZNF768
ZNF837
ZRSR2
ZSCAN21
Entrez ID
91746
1196
HPRD ID
11689
04289
Ensembl ID
ENSG00000083896
ENSG00000176444
Uniprot IDs
J3QR07
Q96MU7
A8K7I0
B1AVT0
B7Z8N6
P49760
PDB IDs
2YUD
4R3H
4R3I
6RT4
6RT5
6RT6
6RT7
6SYZ
6SZ1
6SZ2
6SZ3
6SZL
6SZN
6SZR
6SZT
6SZX
6SZY
6T01
6T02
6T03
6T04
6T05
6T06
6T07
6T08
6T09
6T0A
6T0C
6T0D
6T0O
6T0X
6T0Z
6T10
6T11
6T12
6WE8
6WE9
6WEA
6YKE
6YKI
6YKJ
6YKZ
6YL0
6YL8
6YL9
6YM2
6YM8
6YNI
6YNJ
6YNK
6YNL
6YNM
6YNN
6YNO
6YNP
6YOQ
6ZCM
6ZCN
6ZD9
7L4X
7L4Y
7P87
7P88
7P8A
7P8B
7P8F
7PJ7
7PJ8
7PJ9
7PJA
7PJB
7PJP
7PJQ
7PO6
8K2E
8Q2Q
8Q2R
8Q2S
8Q2T
8Q2U
8Q2V
8Q2W
8Q2X
8Q2Y
8Q31
8Q32
8Q33
8Q35
8Q37
8Q38
8Q39
8Q3A
8Q3G
8Q4M
8Q4N
8Q4P
8Q4Q
8Q4R
8Q4T
8Q4U
8Q4V
8Q4W
3NR9
5UNP
6FYI
6FYK
6FYL
6KHE
Enriched GO Terms of Interacting Partners
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Regulation Of RNA Splicing
Regulation Of MRNA Splicing, Via Spliceosome
Regulation Of MRNA Processing
Regulation Of MRNA Metabolic Process
MRNA Processing
MRNA Metabolic Process
Regulation Of Alternative MRNA Splicing, Via Spliceosome
RNA Splicing
Positive Regulation Of RNA Splicing
RNA Processing
Nucleic Acid Binding
Positive Regulation Of MRNA Splicing, Via Spliceosome
Protein Domain Specific Binding
Non-membrane Spanning Protein Tyrosine Kinase Activity
MRNA Binding
RNA Binding
Spliceosomal Complex
RNA Metabolic Process
Protein Tyrosine Kinase Activity
Macromolecule Metabolic Process
SH2 Domain Binding
Nucleoplasm
Nuclear Speck
Nucleic Acid Metabolic Process
Regulation Of Macromolecule Biosynthetic Process
Protein Phosphorylation
Positive Regulation Of Gene Expression
Fc-gamma Receptor Signaling Pathway Involved In Phagocytosis
Protein Kinase Activity
Positive Regulation Of MRNA Metabolic Process
Fc Receptor Mediated Stimulatory Signaling Pathway
Regulation Of Gene Expression
Phosphorylation
Regulation Of RNA Metabolic Process
Identical Protein Binding
Ephrin Receptor Binding
Nucleus
Regulation Of Primary Metabolic Process
Nucleolus
Fc-gamma Receptor Signaling Pathway
Kinase Activity
Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Macromolecule Metabolic Process
MRNA Splicing, Via Spliceosome
T Cell Receptor Signaling Pathway
Nucleobase-containing Compound Metabolic Process
RNA Splicing, Via Transesterification Reactions
Negative Regulation Of Actin Nucleation
Activated T Cell Proliferation
Ephrin Receptor Signaling Pathway
MRNA Metabolic Process
MRNA Processing
RNA Splicing
MRNA Splicing, Via Spliceosome
RNA Binding
RNA Splicing, Via Transesterification Reactions
RS Domain Binding
RNA Processing
Nucleus
RNA Metabolic Process
Nuclear Speck
Regulation Of RNA Splicing
Regulation Of MRNA Splicing, Via Spliceosome
Regulation Of MRNA Processing
Nucleic Acid Metabolic Process
Regulation Of MRNA Metabolic Process
Spliceosomal Complex
Regulation Of RNA Metabolic Process
Zinc Ion Binding
Protein-RNA Complex Assembly
Nucleic Acid Binding
Regulation Of Gene Expression
Regulation Of Macromolecule Metabolic Process
Regulation Of Macromolecule Biosynthetic Process
Nucleoplasm
Regulation Of Nucleobase-containing Compound Metabolic Process
MRNA Binding
Nucleobase-containing Compound Metabolic Process
Regulation Of Primary Metabolic Process
Regulation Of Alternative MRNA Splicing, Via Spliceosome
MRNA Splice Site Recognition
Macromolecule Metabolic Process
Catalytic Step 2 Spliceosome
Regulation Of Metabolic Process
Spliceosomal Complex Assembly
Mammalian Oogenesis Stage
Protein Binding
MRNA Alternative Polyadenylation
DNA-binding Transcription Factor Activity, RNA Polymerase II-specific
Protein K6-linked Ubiquitination
Protein Serine/threonine/tyrosine Kinase Activity
Pre-mRNA 3'-splice Site Binding
U2AF Complex
MRNA 3'-end Processing
RNA Polymerase II Transcription Regulatory Region Sequence-specific DNA Binding
DNA Binding
Positive Regulation Of Translational Initiation
Regulation Of Transcription By RNA Polymerase II
Negative Regulation Of PERK-mediated Unfolded Protein Response
N6-methyladenosine-containing RNA Reader Activity
Tagcloud
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Tagcloud (Difference)
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Tagcloud (Intersection)
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