YTHDC1 and SOX13

Number of citations of the paper that reports this interaction (PMID 21988832)
14

Data Source:
BioGRID (two hybrid)

		YTHDC1	SOX13
Gene Name		YTH domain containing 1	SRY (sex determining region Y)-box 13
Image			No pdb structure
Gene Ontology Annotations	Cellular Component	Nucleus Nuclear Body	Nucleus Nucleoplasm
	Molecular Function	RNA Binding Protein Binding Poly(A) RNA Binding	Sequence-specific DNA Binding Transcription Factor Activity Protein Binding Sequence-specific DNA Binding
	Biological Process	MRNA Splice Site Selection	Transcription, DNA-templated Regulation Of Transcription, DNA-templated Anatomical Structure Morphogenesis Regulation Of Gamma-delta T Cell Differentiation
Pathways
Drugs
Diseases
GWAS		Obesity-related traits ( 23251661)
Protein-Protein Interactions		34 interactors: ABL1 ADAMTS4 CFH CLK2 CORO1A DVL3 EDC4 EMD FYN GOLGA2 HNRNPK KHDRBS1 KHDRBS2 KHDRBS3 KRT18 LAMC3 LAMTOR5 LZTS2 MPRIP PLG PROSER2 RBMY1F SDCBP2 SEPT10 SOX13 SRC SRPK1 SRPK2 SRSF1 SRSF2 TRA2A TRA2B TXK VPS51	3 interactors: CTBP2 SMAD7 YTHDC1
Entrez ID		91746	9580
HPRD ID		11689	09205
Ensembl ID		ENSG00000083896	ENSG00000143842
Uniprot IDs		J3QR07 Q96MU7	B4DX26 Q9UN79
PDB IDs		2YUD
Enriched GO Terms of Interacting Partners?		MRNA Metabolic Process MRNA Processing RNA Splicing RNA Processing Peptidyl-tyrosine Autophosphorylation Regulation Of RNA Splicing MRNA Splicing, Via Spliceosome RNA Splicing, Via Transesterification Reactions Regulation Of MRNA Splicing, Via Spliceosome Regulation Of MRNA Processing Protein Autophosphorylation Regulation Of Cell-cell Adhesion RNA Metabolic Process Peptidyl-tyrosine Phosphorylation Regulation Of Wnt Signaling Pathway Gene Expression Viral Process Innate Immune Response Regulation Of Cell Proliferation Cellular Response To Platelet-derived Growth Factor Stimulus Response To Platelet-derived Growth Factor Regulation Of Cell Adhesion Anatomical Structure Development Leukocyte Migration Regulation Of Canonical Wnt Signaling Pathway Immune Response Regulation Of RNA Metabolic Process Regulation Of Intracellular Transport Cytoplasmic Transport Defense Response Cell Cycle Nucleobase-containing Compound Metabolic Process Regulation Of Cellular Localization Activated T Cell Proliferation Phagocytosis Positive Regulation Of Viral Genome Replication Regulation Of Neuron Death Heterocycle Metabolic Process Immune Response-activating Cell Surface Receptor Signaling Pathway Cellular Aromatic Compound Metabolic Process Nuclear Export Regulation Of T Cell Activation Nucleus Organization Regulation Of Gene Expression Developmental Process Regulation Of Nitrogen Compound Metabolic Process Antigen Receptor-mediated Signaling Pathway Cellular Nitrogen Compound Metabolic Process Cellular Process Golgi To Plasma Membrane Transport	Positive Regulation Of Retinoic Acid Receptor Signaling Pathway Positive Regulation Of Chromatin Binding Regulation Of Ventricular Cardiac Muscle Cell Membrane Depolarization Negative Regulation Of Transcription By Competitive Promoter Binding Negative Regulation Of Pathway-restricted SMAD Protein Phosphorylation Pathway-restricted SMAD Protein Phosphorylation Cellular Protein Complex Localization Response To Laminar Fluid Shear Stress Negative Regulation Of Peptidyl-threonine Phosphorylation White Fat Cell Differentiation Protein Complex Localization Negative Regulation Of Epithelial To Mesenchymal Transition RNA Metabolic Process Regulation Of Activin Receptor Signaling Pathway Viral Genome Replication Gene Expression Negative Regulation Of Peptidyl-serine Phosphorylation Ventricular Septum Morphogenesis Negative Regulation Of Stem Cell Differentiation Regulation Of Membrane Depolarization Response To Fluid Shear Stress MRNA Splice Site Selection Negative Regulation Of BMP Signaling Pathway Positive Regulation Of Transcription From RNA Polymerase II Promoter Ventricular Cardiac Muscle Tissue Morphogenesis Adherens Junction Assembly Regulation Of Retinoic Acid Receptor Signaling Pathway Negative Regulation Of Transcription, DNA-templated Negative Regulation Of Nucleic Acid-templated Transcription Negative Regulation Of RNA Biosynthetic Process Ventricular Cardiac Muscle Tissue Development Ventricular Septum Development Regulation Of Pathway-restricted SMAD Protein Phosphorylation Cardiac Muscle Tissue Morphogenesis Artery Morphogenesis Cardiac Septum Morphogenesis Regulation Of Epithelial To Mesenchymal Transition Nucleobase-containing Compound Metabolic Process Spliceosomal Complex Assembly Muscle Tissue Morphogenesis Negative Regulation Of Ubiquitin-protein Transferase Activity Artery Development Positive Regulation Of Proteasomal Ubiquitin-dependent Protein Catabolic Process Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Muscle Organ Morphogenesis Cardiac Ventricle Morphogenesis Negative Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway Positive Regulation Of Proteasomal Protein Catabolic Process Negative Regulation Of Gene Expression
Tagcloud ?			c57bl cd45 committed congenic considerably defect dermatitis developmental expanded gammadelta gammadeltat17 homed inflamed intrinsic lymph migrated neonatal nodes participate protected psoriasis requirements skin spontaneous subset substrain thymus trait vgamma4
Tagcloud (Difference) ?			c57bl cd45 committed congenic considerably defect dermatitis developmental expanded gammadelta gammadeltat17 homed inflamed intrinsic lymph migrated neonatal nodes participate protected psoriasis requirements skin spontaneous subset substrain thymus trait vgamma4
Tagcloud (Intersection) ?