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YTHDC1 and VPS51
Number of citations of the paper that reports this interaction (PubMedID
21988832
)
38
Data Source:
BioGRID
(two hybrid)
YTHDC1
VPS51
Description
YTH N6-methyladenosine RNA binding protein C1
VPS51 subunit of GARP complex
Image
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Plasma Membrane
Nuclear Speck
GARP Complex
Nucleolus
Endosome
Golgi Apparatus
Trans-Golgi Network
Cytosol
Membrane
Trans-Golgi Network Membrane
Recycling Endosome
EARP Complex
Molecular Function
RNA Binding
MRNA Binding
Protein Binding
N6-methyladenosine-containing RNA Reader Activity
Protein Binding
Biological Process
Regulation Of Alternative MRNA Splicing, Via Spliceosome
MRNA Splicing, Via Spliceosome
In Utero Embryonic Development
MRNA Splice Site Recognition
MRNA Processing
MRNA Export From Nucleus
Spermatogenesis
RNA Splicing
Dosage Compensation By Inactivation Of X Chromosome
Post-transcriptional Regulation Of Gene Expression
Regulation Of MRNA Splicing, Via Spliceosome
Primary Follicle Stage
MRNA Alternative Polyadenylation
Protein Targeting
Lipid Transport
Autophagy
Golgi Organization
Lysosomal Transport
Protein Transport
Endocytic Recycling
Retrograde Transport, Endosome To Golgi
Golgi Vesicle Transport
Brain Morphogenesis
Vesicle-mediated Cholesterol Transport
Pathways
Nuclear RNA decay
Retrograde transport at the Trans-Golgi-Network
Drugs
Diseases
GWAS
Mean corpuscular hemoglobin (
32888494
)
Obesity-related traits (
23251661
)
Serum uric acid levels (
32514006
)
Interacting Genes
41 interacting genes:
ABL1
ADAMTS4
ANKRD28
CFH
CLK1
CLK2
CORO1A
DVL3
EDC4
EMD
FYN
GOLGA2
HNRNPK
KHDRBS1
KHDRBS2
KHDRBS3
KRT18
KRTAP10-6
LAMC3
LAMTOR5
LZTS2
PHF19
PICK1
PLG
PROSER2
RBMY1A1
RBMY1F
RBMY1J
RNPS1
SDCBP2
SEPTIN10
SOX13
SRC
SRPK1
SRPK2
SRSF1
SRSF2
TRA2A
TRA2B
TXK
VPS51
6 interacting genes:
CDKN1A
FXR1
GSK3B
NUDT3
VPS54
YTHDC1
Entrez ID
91746
738
HPRD ID
11689
12605
Ensembl ID
ENSG00000083896
ENSG00000149823
Uniprot IDs
J3QR07
Q96MU7
Q9UID3
PDB IDs
2YUD
4R3H
4R3I
6RT4
6RT5
6RT6
6RT7
6SYZ
6SZ1
6SZ2
6SZ3
6SZL
6SZN
6SZR
6SZT
6SZX
6SZY
6T01
6T02
6T03
6T04
6T05
6T06
6T07
6T08
6T09
6T0A
6T0C
6T0D
6T0O
6T0X
6T0Z
6T10
6T11
6T12
6WE8
6WE9
6WEA
6YKE
6YKI
6YKJ
6YKZ
6YL0
6YL8
6YL9
6YM2
6YM8
6YNI
6YNJ
6YNK
6YNL
6YNM
6YNN
6YNO
6YNP
6YOQ
6ZCM
6ZCN
6ZD9
7L4X
7L4Y
7P87
7P88
7P8A
7P8B
7P8F
7PJ7
7PJ8
7PJ9
7PJA
7PJB
7PJP
7PJQ
7PO6
8K2E
8Q2Q
8Q2R
8Q2S
8Q2T
8Q2U
8Q2V
8Q2W
8Q2X
8Q2Y
8Q31
8Q32
8Q33
8Q35
8Q37
8Q38
8Q39
8Q3A
8Q3G
8Q4M
8Q4N
8Q4P
8Q4Q
8Q4R
8Q4T
8Q4U
8Q4V
8Q4W
4J2C
Enriched GO Terms of Interacting Partners
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Regulation Of RNA Splicing
Regulation Of MRNA Splicing, Via Spliceosome
Regulation Of MRNA Processing
Regulation Of MRNA Metabolic Process
MRNA Processing
MRNA Metabolic Process
Regulation Of Alternative MRNA Splicing, Via Spliceosome
RNA Splicing
Positive Regulation Of RNA Splicing
RNA Processing
Nucleic Acid Binding
Positive Regulation Of MRNA Splicing, Via Spliceosome
Protein Domain Specific Binding
Non-membrane Spanning Protein Tyrosine Kinase Activity
MRNA Binding
RNA Binding
Spliceosomal Complex
RNA Metabolic Process
Protein Tyrosine Kinase Activity
Macromolecule Metabolic Process
SH2 Domain Binding
Nucleoplasm
Nuclear Speck
Nucleic Acid Metabolic Process
Regulation Of Macromolecule Biosynthetic Process
Protein Phosphorylation
Positive Regulation Of Gene Expression
Fc-gamma Receptor Signaling Pathway Involved In Phagocytosis
Protein Kinase Activity
Positive Regulation Of MRNA Metabolic Process
Fc Receptor Mediated Stimulatory Signaling Pathway
Regulation Of Gene Expression
Phosphorylation
Regulation Of RNA Metabolic Process
Identical Protein Binding
Ephrin Receptor Binding
Nucleus
Regulation Of Primary Metabolic Process
Nucleolus
Fc-gamma Receptor Signaling Pathway
Kinase Activity
Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Macromolecule Metabolic Process
MRNA Splicing, Via Spliceosome
T Cell Receptor Signaling Pathway
Nucleobase-containing Compound Metabolic Process
RNA Splicing, Via Transesterification Reactions
Negative Regulation Of Actin Nucleation
Activated T Cell Proliferation
Ephrin Receptor Signaling Pathway
Embryo Development Ending In Birth Or Egg Hatching
Multicellular Organism Development
Chordate Embryonic Development
In Utero Embryonic Development
Presynaptic Modulation Of Chemical Synaptic Transmission
Cytoplasmic Translational Initiation
Regulation Of Long-term Synaptic Potentiation
Tissue Regeneration
PCNA-p21 Complex
Cell Cycle G1/S Phase Transition
Cellular Localization
Negative Regulation Of Cardiac Muscle Tissue Regeneration
Regulation Of Growth
G1/S Transition Of Mitotic Cell Cycle
Regeneration
Negative Regulation Of Gene Expression
Negative Regulation Of Protein Metabolic Process
Regulation Of Circadian Rhythm
Superior Temporal Gyrus Development
Negative Regulation Of Type B Pancreatic Cell Development
Post-transcriptional Regulation Of Gene Expression
Negative Regulation Of Mesenchymal Stem Cell Differentiation
Negative Regulation Of Glycogen (starch) Synthase Activity
Regulation Of Microtubule Anchoring At Centrosome
Glutamatergic Synapse
Translational Initiation
Regulation Of Translation At Presynapse, Modulating Synaptic Transmission
MRNA Transport
5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA] Diphosphatase Activity
Inositol Diphosphate Tetrakisphosphate Diphosphatase Activity
Diphosphoinositol Polyphosphate Metabolic Process
Inositol Diphosphate Pentakisphosphate Diphosphatase Activity
Inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase Activity
Diphosphoinositol Polyphosphate Catabolic Process
Bis(5'-adenosyl)-hexaphosphatase Activity
Diadenosine Hexaphosphate Catabolic Process
Inositol Phosphate Catabolic Process
Diadenosine Pentaphosphate Catabolic Process
Adenosine 5'-(hexahydrogen Pentaphosphate) Catabolic Process
Diphosphoinositol-polyphosphate Diphosphatase Activity
Endopolyphosphatase Activity
Inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate Diphosphatase Activity
Neural Tissue Regeneration
Post-embryonic Forelimb Morphogenesis
Primary Follicle Stage
Mammalian Oogenesis Stage
Mitotic Cell Cycle Phase Transition
RNA Transport
Negative Regulation Of Catalytic Activity
Cell Cycle Phase Transition
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