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SMAD5 and RBM4
Number of citations of the paper that reports this interaction (PubMedID
15231748
)
54
Data Source:
BioGRID
(two hybrid)
HPRD
(two hybrid)
SMAD5
RBM4
Description
SMAD family member 5
RNA binding motif protein 4
Image
GO Annotations
Cellular Component
Chromatin
Male Germ Cell Nucleus
Nucleus
Nucleoplasm
Transcription Regulator Complex
Cytoplasm
Mitochondrion
Cytosol
Protein-containing Complex
SMAD Protein Complex
Heteromeric SMAD Protein Complex
Nucleus
Nucleoplasm
Nucleolus
Cytoplasm
Cytosol
Cytoplasmic Stress Granule
Nuclear Speck
Perinuclear Region Of Cytoplasm
Molecular Function
RNA Polymerase II Transcription Regulatory Region Sequence-specific DNA Binding
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
DNA-binding Transcription Factor Activity, RNA Polymerase II-specific
DNA-binding Transcription Repressor Activity, RNA Polymerase II-specific
DNA Binding
DNA-binding Transcription Factor Activity
Protein Binding
DEAD/H-box RNA Helicase Binding
Ubiquitin Protein Ligase Binding
Metal Ion Binding
I-SMAD Binding
Sequence-specific Double-stranded DNA Binding
Nucleic Acid Binding
RNA Binding
MRNA Binding
MRNA 3'-UTR Binding
Protein Binding
Zinc Ion Binding
Cyclin Binding
MiRNA Binding
Pre-mRNA Binding
Metal Ion Binding
Pre-mRNA Intronic Binding
Pre-mRNA Intronic Pyrimidine-rich Binding
Biological Process
Negative Regulation Of Transcription By RNA Polymerase II
Ossification
Osteoblast Differentiation
Ureteric Bud Development
Mullerian Duct Regression
Osteoblast Fate Commitment
Cardiac Conduction System Development
Regulation Of DNA-templated Transcription
Regulation Of Transcription By RNA Polymerase II
Intracellular Iron Ion Homeostasis
Signal Transduction
Transforming Growth Factor Beta Receptor Signaling Pathway
Germ Cell Development
Anatomical Structure Morphogenesis
Embryonic Pattern Specification
Negative Regulation Of Gene Expression
Cell Differentiation
Erythrocyte Differentiation
BMP Signaling Pathway
Developmental Process
Negative Regulation Of Apoptotic Process
Positive Regulation Of Osteoblast Differentiation
Positive Regulation Of DNA-templated Transcription
Positive Regulation Of Transcription By RNA Polymerase II
Stem Cell Differentiation
Cartilage Development
Cardiac Muscle Contraction
Bone Development
SMAD Protein Signal Transduction
Cellular Response To Growth Factor Stimulus
Transforming Growth Factor Beta Receptor Superfamily Signaling Pathway
Negative Regulation Of Fas Signaling Pathway
Anti-Mullerian Hormone Receptor Signaling Pathway
Regulation Of Alternative MRNA Splicing, Via Spliceosome
Cap-independent Translational Initiation
IRES-dependent Translational Initiation Of Linear MRNA
RNA Processing
MRNA Processing
Circadian Rhythm
RNA Splicing
Regulation Of Gene Expression
Negative Regulation Of Translation
Cell Differentiation
Pancreas Development
Regulatory NcRNA-mediated Gene Silencing
Negative Regulation Of Translation In Response To Stress
Circadian Regulation Of Gene Expression
MiRNA-mediated Gene Silencing By Inhibition Of Translation
Insulin Secretion Involved In Cellular Response To Glucose Stimulus
Enteroendocrine Cell Differentiation
Glucose Homeostasis
Entrainment Of Circadian Clock By Photoperiod
Positive Regulation Of Translation
Negative Regulation Of Translational Initiation
Regulation Of Insulin Receptor Signaling Pathway
Response To Arsenic-containing Substance
Regulation Of Nucleocytoplasmic Transport
Positive Regulation Of Muscle Cell Differentiation
Circadian Regulation Of Translation
Pathways
Signaling by BMP
Phosphorylated BMAL1:CLOCK (ARNTL:CLOCK) activates expression of core clock genes
Drugs
Diseases
GWAS
Insomnia symptoms (never/rarely vs. sometimes/usually) (
30804566
)
Insomnia symptoms (never/rarely vs. usually) (
30804566
)
Mean platelet volume (
32888494
)
Sleep duration (short sleep) (
30846698
)
Bipolar disorder (
21926972
)
Interacting Genes
47 interacting genes:
ACVR1
ANKRD13A
BCAT1
BMP6
CHMP3
COPS5
CXXC5
EP300
FLNA
GDF6
HBG2
HGS
HOXA13
HOXD13
MBD1
MEN1
MTMR10
NEDD4
PLEKHO1
PNKP
POU6F2
PPIL4
PSMD11
PTPN12
RBM4
ROCK1
RYR2
SF3B1
SF3B3
SFPQ
SMAD1
SMAD4
SMURF1
SMURF2
SNRNP70
SNRPA
SOX5
SOX7
SUV39H1
SUV39H2
TOB1
U2AF2
UBA1
WBP2
WWP1
ZEB2
ZNF8
97 interacting genes:
AQR
CCNA1
CDK2
DDX17
DDX5
DHX9
ESS2
HNRNPF
HNRNPH2
HNRNPH3
HNRNPK
HNRNPM
HNRNPUL1
KLHL41
LRP2BP
MAPK8IP2
MIR1-1
MIR1-2
MIR106A
MIR106B
MIR10B
MIR128-1
MIR128-2
MIR138-1
MIR138-2
MIR141
MIR143
MIR145
MIR155
MIR15B
MIR16-2
MIR17
MIR199A1
MIR19A
MIR19B1
MIR19B2
MIR200A
MIR200B
MIR200C
MIR205
MIR206
MIR20A
MIR20B
MIR21
MIR214
MIR221
MIR222
MIR25
MIR29A
MIR29B1
MIR29B2
MIR29C
MIR31
MIR34A
MIR34B
MIR34C
MIR363
MIR429
MIR451A
MIR7-1
MIR7-2
MIR7-3
MIR9-1
MIR9-2
MIR9-3
MIR92A1
MIR92A2
MIR93
MIRLET7A1
MIRLET7A2
MIRLET7A3
MIRLET7B
MIRLET7C
MIRLET7D
MIRLET7E
MIRLET7F1
MIRLET7F2
MIRLET7G
MIRLET7I
PABPC1
PRPF31
PTBP2
PTEN
RBM10
RBM22
RBM23
RBM42
RBM7
RNF10
SF1
SF3B4
SMAD5
SNRPC
STEEP1
SURF6
TRIB3
U2AF2
Entrez ID
4090
5936
HPRD ID
04381
03982
Ensembl ID
ENSG00000113658
ENSG00000173933
Uniprot IDs
Q68DB7
Q99717
Q9BWF3
PDB IDs
6FZS
6TCE
2DNQ
Enriched GO Terms of Interacting Partners
?
Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of RNA Metabolic Process
Regulation Of Primary Metabolic Process
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Regulation Of Transmembrane Receptor Protein Serine/threonine Kinase Signaling Pathway
Regulation Of Gene Expression
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Macromolecule Metabolic Process
BMP Signaling Pathway
SMAD Binding
Negative Regulation Of RNA Metabolic Process
Chromatin
Nucleoplasm
Positive Regulation Of Transmembrane Receptor Protein Serine/threonine Kinase Signaling Pathway
Regulation Of Transcription By RNA Polymerase II
Negative Regulation Of DNA-templated Transcription
Regulation Of Cellular Response To Growth Factor Stimulus
Negative Regulation Of RNA Biosynthetic Process
Regulation Of Metabolic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Positive Regulation Of Macromolecule Metabolic Process
RNA Metabolic Process
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
Transcription By RNA Polymerase II
Positive Regulation Of RNA Metabolic Process
Positive Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Macromolecule Metabolic Process
Nucleus
Negative Regulation Of Macromolecule Biosynthetic Process
Positive Regulation Of Biosynthetic Process
Positive Regulation Of Metabolic Process
Transcription Cis-regulatory Region Binding
Nucleic Acid Metabolic Process
Transforming Growth Factor Beta Receptor Superfamily Signaling Pathway
Negative Regulation Of Biosynthetic Process
Negative Regulation Of Metabolic Process
R-SMAD Binding
Cell Surface Receptor Protein Serine/threonine Kinase Signaling Pathway
Negative Regulation Of Transcription By RNA Polymerase II
Regulation Of SMAD Protein Signal Transduction
Positive Regulation Of Cartilage Development
Positive Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
DNA-templated Transcription
Response To Growth Factor
Epithelial Cell Migration
Positive Regulation Of Transcription By RNA Polymerase II
Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
Positive Regulation Of RNA Biosynthetic Process
Positive Regulation Of DNA-templated Transcription
MiRNA-mediated Post-transcriptional Gene Silencing
Regulatory NcRNA-mediated Post-transcriptional Gene Silencing
RISC Complex
Post-transcriptional Gene Silencing
Regulatory NcRNA-mediated Gene Silencing
MRNA Base-pairing Post-transcriptional Repressor Activity
Post-transcriptional Regulation Of Gene Expression
Negative Regulation Of Gene Expression
MRNA 3'-UTR Binding
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Biosynthetic Process
MiRNA-mediated Gene Silencing By Inhibition Of Translation
Negative Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Metabolic Process
MiRNA-mediated Gene Silencing By MRNA Destabilization
Regulation Of Gene Expression
Extracellular Vesicle
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Macromolecule Metabolic Process
Regulation Of MRNA Metabolic Process
Negative Regulation Of Translation
Positive Regulation Of MRNA Catabolic Process
MRNA Destabilization
RNA Destabilization
Negative Regulation Of Cell Migration
Regulation Of Metabolic Process
Negative Regulation Of Angiogenesis
Negative Regulation Of Cell Motility
Negative Regulation Of Vasculature Development
Regulation Of MRNA Stability
Positive Regulation Of MRNA Metabolic Process
Negative Regulation Of Locomotion
Regulation Of Angiogenesis
Regulation Of Vasculature Development
Regulation Of RNA Stability
Negative Regulation Of Cytokine Production
Regulation Of Translation
Regulation Of Blood Vessel Endothelial Cell Migration
Negative Regulation Of Protein Metabolic Process
Regulation Of Endothelial Cell Migration
Negative Regulation Of Multicellular Organismal Process
Negative Regulation Of Developmental Process
Regulation Of Cell Migration
Negative Regulation Of Blood Vessel Endothelial Cell Migration
Negative Regulation Of Endothelial Cell Migration
MRNA Splicing, Via Spliceosome
Negative Regulation Of Signal Transduction
RNA Splicing, Via Transesterification Reactions
Negative Regulation Of Vascular Endothelial Growth Factor Production
Regulation Of Cell Motility
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Tagcloud (Intersection)
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