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LSM3 and LSM8
Number of citations of the paper that reports this interaction (PMID
11920408
)
2
Data Source:
HPRD
(in vitro)
LSM3
LSM8
Gene Name
LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
Image
No pdb structure
No pdb structure
Gene Ontology Annotations
Cellular Component
Nucleus
Cytosol
Catalytic Step 2 Spliceosome
Spliceosomal Complex
U4/U6 X U5 Tri-snRNP Complex
Molecular Function
Protein Binding
Poly(A) RNA Binding
Protein Binding
U6 SnRNA Binding
U6 SnRNA 3'-end Binding
Poly(A) RNA Binding
Biological Process
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
MRNA Splicing, Via Spliceosome
MRNA Processing
Gene Expression
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
MRNA Splicing, Via Spliceosome
Pathways
mRNA decay by 5' to 3' exoribonuclease
Deadenylation-dependent mRNA decay
Drugs
Diseases
GWAS
Protein-Protein Interactions
28 interactors:
CEP95
CLNS1A
DLX4
EEF1A1
GDF9
GSTA1
KEAP1
LSM1
LSM10
LSM2
LSM5
LSM6
LSM7
LSM8
SF3B2
SMN1
SNRPD1
SNRPD3
SNRPE
SNRPG
TCL1A
THOC5
UTP14A
WDR77
WDR83
XPC
XRN2
YBX1
49 interactors:
ARNT
BCKDK
COL23A1
DBF4
DCP1A
DCP1B
DPAGT1
ECHDC2
EFTUD2
EXOSC10
EXOSC6
FAM63A
FERMT3
GMPPA
GTF2I
HSPA9
IFNLR1
IGHMBP2
ISOC2
ITSN2
KCTD3
LSM2
LSM3
LSM4
LSM5
LSM6
LSM7
MGA
MPRIP
MRPL48
MTHFR
NAGK
NME4
PDCD2
PGD
PHF11
RBM5
RPL24
RSC1A1
RSL24D1
SEPT10
SEPT5
SMU1
SNRNP200
SNRPB
SNRPD1
TALDO1
THUMPD3
UPF1
Entrez ID
27258
51691
HPRD ID
06283
06288
Ensembl ID
Uniprot IDs
P62310
A4D0W0
O95777
PDB IDs
Enriched GO Terms of Interacting Partners
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MRNA Processing
RNA Splicing
MRNA Metabolic Process
RNA Processing
RNA Splicing, Via Transesterification Reactions
MRNA Splicing, Via Spliceosome
RNA Metabolic Process
Cellular Nitrogen Compound Metabolic Process
Nucleobase-containing Compound Metabolic Process
Gene Expression
Spliceosomal SnRNP Assembly
Nitrogen Compound Metabolic Process
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Histone MRNA Metabolic Process
Ribonucleoprotein Complex Biogenesis
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic
Ribonucleoprotein Complex Assembly
NcRNA Metabolic Process
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
DNA-templated Transcription, Termination
RNA Catabolic Process
Cellular Metabolic Process
Termination Of RNA Polymerase II Transcription
Aromatic Compound Catabolic Process
Nuclear-transcribed MRNA Catabolic Process
Spliceosomal Complex Assembly
MRNA Catabolic Process
MRNA 3'-end Processing
Cellular Macromolecule Catabolic Process
Cellular Macromolecular Complex Assembly
RNA 3'-end Processing
Metabolic Process
Transcription From RNA Polymerase II Promoter
Cellular Process
Catabolic Process
Maturation Of SSU-rRNA
Transcription, DNA-templated
RNA Biosynthetic Process
Ribosomal Small Subunit Biogenesis
Oocyte Growth
Nucleotide-excision Repair, DNA Damage Recognition
Cellular Component Assembly
Regulation Of Stem Cell Division
Negative Regulation Of DNA Damage Checkpoint
Secretory Columnal Luminar Epithelial Cell Differentiation Involved In Prostate Glandular Acinus Development
Regulation Of Progesterone Secretion
Proteasomal Ubiquitin-independent Protein Catabolic Process
CRD-mediated MRNA Stabilization
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic
Nuclear-transcribed MRNA Catabolic Process
MRNA Metabolic Process
MRNA Catabolic Process
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
RNA Catabolic Process
Nucleobase-containing Compound Metabolic Process
Aromatic Compound Catabolic Process
RNA Splicing
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Cellular Nitrogen Compound Metabolic Process
Nitrogen Compound Metabolic Process
MRNA Processing
RNA Processing
Catabolic Process
Gene Expression
RNA Metabolic Process
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
Cellular Macromolecule Catabolic Process
Ribonucleoprotein Complex Biogenesis
Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay
Cellular Metabolic Process
Histone MRNA Metabolic Process
Pentose Biosynthetic Process
Metabolic Process
Histone MRNA Catabolic Process
Dosage Compensation By Inactivation Of X Chromosome
Spliceosomal Complex Assembly
Dosage Compensation
Ribonucleoprotein Complex Assembly
Ribosome Biogenesis
Pentose-phosphate Shunt
Glyceraldehyde-3-phosphate Metabolic Process
Nucleobase-containing Small Molecule Metabolic Process
Glucose 6-phosphate Metabolic Process
RRNA Processing
NcRNA Metabolic Process
Starch Catabolic Process
Nuclear Retention Of Unspliced Pre-mRNA At The Site Of Transcription
Response To Type III Interferon
Dolichol Biosynthetic Process
NADP Metabolic Process
RRNA Metabolic Process
Spliceosomal SnRNP Assembly
Carbohydrate Biosynthetic Process
D-gluconate Metabolic Process
Response To Vitamin B2
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Tagcloud (Intersection)
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