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LSM8 and GMPPA
Number of citations of the paper that reports this interaction (PMID
15231747
)
44
Data Source:
BioGRID
(two hybrid)
LSM8
GMPPA
Gene Name
LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
GDP-mannose pyrophosphorylase A
Image
No pdb structure
No pdb structure
Gene Ontology Annotations
Cellular Component
Spliceosomal Complex
U4/U6 X U5 Tri-snRNP Complex
Cytoplasm
Extracellular Vesicular Exosome
Molecular Function
Protein Binding
U6 SnRNA Binding
U6 SnRNA 3'-end Binding
Poly(A) RNA Binding
Nucleotidyltransferase Activity
Biological Process
MRNA Splicing, Via Spliceosome
Dolichol-linked Oligosaccharide Biosynthetic Process
GDP-mannose Biosynthetic Process
Protein N-linked Glycosylation Via Asparagine
Post-translational Protein Modification
Cellular Protein Metabolic Process
Pathways
Diseases of glycosylation
Defective ALG14 causes congenital myasthenic syndrome (ALG14-CMS)
Defective MGAT2 causes MGAT2-CDG (CDG-2a)
Defective ALG1 causes ALG1-CDG (CDG-1k)
Defective MOGS causes MOGS-CDG (CDG-2b)
Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
Defective ALG9 causes ALG9-CDG (CDG-1l)
Defective MAN1B1 causes MRT15
Defective ALG11 causes ALG11-CDG (CDG-1p)
Defective ALG2 causes ALG2-CDG (CDG-1i)
Defective ALG3 causes ALG3-CDG (CDG-1d)
Post-translational protein modification
Defective DPAGT1 causes DPAGT1-CDG (CDG-1j) and CMSTA2
Synthesis of substrates in N-glycan biosythesis
Defective B4GALT1 causes B4GALT1-CDG (CDG-2d)
Synthesis of GDP-mannose
Defective ALG6 causes ALG6-CDG (CDG-1c)
Defective RFT1 causes RFT1-CDG (CDG-1n)
Asparagine N-linked glycosylation
Defective ALG8 causes ALG8-CDG (CDG-1h)
Defective MPDU1 causes MPDU1-CDG (CDG-1f)
Defective ALG12 causes ALG12-CDG (CDG-1g)
Diseases associated with N-glycosylation of proteins
Drugs
Diseases
GWAS
Protein-Protein Interactions
49 interactors:
ARNT
BCKDK
COL23A1
DBF4
DCP1A
DCP1B
DPAGT1
ECHDC2
EFTUD2
EXOSC10
EXOSC6
FAM63A
FERMT3
GMPPA
GTF2I
HSPA9
IFNLR1
IGHMBP2
ISOC2
ITSN2
KCTD3
LSM2
LSM3
LSM4
LSM5
LSM6
LSM7
MGA
MPRIP
MRPL48
MTHFR
NAGK
NME4
PDCD2
PGD
PHF11
RBM5
RPL24
RSC1A1
RSL24D1
SEPT10
SEPT5
SMU1
SNRNP200
SNRPB
SNRPD1
TALDO1
THUMPD3
UPF1
5 interactors:
BTC
CDR2
CRP
GMPPB
LSM8
Entrez ID
51691
29926
HPRD ID
06288
13588
Ensembl ID
ENSG00000144591
Uniprot IDs
A4D0W0
O95777
Q96IJ6
PDB IDs
Enriched GO Terms of Interacting Partners
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Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic
Nuclear-transcribed MRNA Catabolic Process
MRNA Metabolic Process
MRNA Catabolic Process
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
RNA Catabolic Process
Nucleobase-containing Compound Metabolic Process
Aromatic Compound Catabolic Process
RNA Splicing
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Cellular Nitrogen Compound Metabolic Process
Nitrogen Compound Metabolic Process
MRNA Processing
RNA Processing
Catabolic Process
Gene Expression
RNA Metabolic Process
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
Cellular Macromolecule Catabolic Process
Ribonucleoprotein Complex Biogenesis
Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay
Cellular Metabolic Process
Histone MRNA Metabolic Process
Pentose Biosynthetic Process
Metabolic Process
Histone MRNA Catabolic Process
Dosage Compensation By Inactivation Of X Chromosome
Spliceosomal Complex Assembly
Dosage Compensation
Ribonucleoprotein Complex Assembly
Ribosome Biogenesis
Pentose-phosphate Shunt
Glyceraldehyde-3-phosphate Metabolic Process
Nucleobase-containing Small Molecule Metabolic Process
Glucose 6-phosphate Metabolic Process
RRNA Processing
NcRNA Metabolic Process
Starch Catabolic Process
Nuclear Retention Of Unspliced Pre-mRNA At The Site Of Transcription
Response To Type III Interferon
Dolichol Biosynthetic Process
NADP Metabolic Process
RRNA Metabolic Process
Spliceosomal SnRNP Assembly
Carbohydrate Biosynthetic Process
D-gluconate Metabolic Process
Response To Vitamin B2
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