Wiki-Pi
Answer Survey
Home
About
Help
Advanced Search
LSM3 and SF3B2
Number of citations of the paper that reports this interaction (PMID
22365833
)
24
Data Source:
BioGRID
(two hybrid)
LSM3
SF3B2
Gene Name
LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
splicing factor 3b, subunit 2, 145kDa
Image
No pdb structure
Gene Ontology Annotations
Cellular Component
Nucleus
Cytosol
Catalytic Step 2 Spliceosome
Nucleoplasm
Spliceosomal Complex
U12-type Spliceosomal Complex
Catalytic Step 2 Spliceosome
Molecular Function
Protein Binding
Poly(A) RNA Binding
Protein Binding
Poly(A) RNA Binding
Biological Process
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
MRNA Splicing, Via Spliceosome
MRNA Processing
Gene Expression
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
MRNA Splicing, Via Spliceosome
MRNA Processing
RNA Splicing
Gene Expression
Viral Process
Pathways
mRNA decay by 5' to 3' exoribonuclease
Deadenylation-dependent mRNA decay
Processing of Capped Intron-Containing Pre-mRNA
mRNA Splicing
mRNA Splicing - Minor Pathway
mRNA Splicing - Major Pathway
Drugs
Diseases
GWAS
Bipolar disorder (
21926972
)
Protein-Protein Interactions
28 interactors:
CEP95
CLNS1A
DLX4
EEF1A1
GDF9
GSTA1
KEAP1
LSM1
LSM10
LSM2
LSM5
LSM6
LSM7
LSM8
SF3B2
SMN1
SNRPD1
SNRPD3
SNRPE
SNRPG
TCL1A
THOC5
UTP14A
WDR77
WDR83
XPC
XRN2
YBX1
25 interactors:
APBB1
APP
C7orf25
C8orf33
CSNK2A1
ERG
FRA10AC1
HNRNPC
KDM1A
KIAA0368
LSM2
LSM3
PCBP2
PRPF40A
RBM7
RBM8A
SF3B4
SMAD3
SNRNP200
TCERG1
THOC1
TOE1
TTC14
U2AF1
ZCCHC10
Entrez ID
27258
10992
HPRD ID
06283
10410
Ensembl ID
ENSG00000087365
Uniprot IDs
P62310
Q13435
PDB IDs
2DO5
Enriched GO Terms of Interacting Partners
?
MRNA Processing
RNA Splicing
MRNA Metabolic Process
RNA Processing
RNA Splicing, Via Transesterification Reactions
MRNA Splicing, Via Spliceosome
RNA Metabolic Process
Cellular Nitrogen Compound Metabolic Process
Nucleobase-containing Compound Metabolic Process
Gene Expression
Spliceosomal SnRNP Assembly
Nitrogen Compound Metabolic Process
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Histone MRNA Metabolic Process
Ribonucleoprotein Complex Biogenesis
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic
Ribonucleoprotein Complex Assembly
NcRNA Metabolic Process
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
DNA-templated Transcription, Termination
RNA Catabolic Process
Cellular Metabolic Process
Termination Of RNA Polymerase II Transcription
Aromatic Compound Catabolic Process
Nuclear-transcribed MRNA Catabolic Process
Spliceosomal Complex Assembly
MRNA Catabolic Process
MRNA 3'-end Processing
Cellular Macromolecule Catabolic Process
Cellular Macromolecular Complex Assembly
RNA 3'-end Processing
Metabolic Process
Transcription From RNA Polymerase II Promoter
Cellular Process
Catabolic Process
Maturation Of SSU-rRNA
Transcription, DNA-templated
RNA Biosynthetic Process
Ribosomal Small Subunit Biogenesis
Oocyte Growth
Nucleotide-excision Repair, DNA Damage Recognition
Cellular Component Assembly
Regulation Of Stem Cell Division
Negative Regulation Of DNA Damage Checkpoint
Secretory Columnal Luminar Epithelial Cell Differentiation Involved In Prostate Glandular Acinus Development
Regulation Of Progesterone Secretion
Proteasomal Ubiquitin-independent Protein Catabolic Process
CRD-mediated MRNA Stabilization
RNA Processing
MRNA Processing
RNA Splicing
MRNA Metabolic Process
RNA Metabolic Process
Gene Expression
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
Nucleobase-containing Compound Metabolic Process
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Cellular Nitrogen Compound Metabolic Process
Nitrogen Compound Metabolic Process
Cellular Metabolic Process
MRNA Export From Nucleus
Transcription, DNA-templated
RNA Export From Nucleus
RNA Biosynthetic Process
MRNA 3'-end Processing
Regulation Of Cell Cycle
RNA 3'-end Processing
Nuclear Export
MRNA Transport
Regulation Of Response To DNA Damage Stimulus
Osteoblast Differentiation
RNA Transport
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic
Nuclear-transcribed MRNA Catabolic Process
RNA Localization
MRNA Catabolic Process
Regulation Of Gene Expression
Negative Regulation Of Cell Cycle
RNA Catabolic Process
Posttranscriptional Regulation Of Gene Expression
Cellular Macromolecule Catabolic Process
Metabolic Process
Termination Of RNA Polymerase II Transcription
Transcription From RNA Polymerase II Promoter
Regulation Of Cell Cycle Process
Negative Regulation Of Protein Metabolic Process
Apoptotic Process
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
Regulation Of RNA Metabolic Process
Cellular Macromolecule Biosynthetic Process
Positive Regulation Of Transforming Growth Factor Beta3 Production
Regulation Of Primitive Erythrocyte Differentiation
Negative Regulation Of Thymidylate Synthase Biosynthetic Process
Negative Regulation Of Potassium Ion Export
Negative Regulation Of Isotype Switching To IgA Isotypes
Tagcloud
?
Tagcloud (Difference)
?
Tagcloud (Intersection)
?