BRAF and RAP1A

Number of citations: 68 (PubMedID 16507992)
Data Source: BioGRID (affinity chromatography technology), HPRD (in vivo)

		BRAF	RAP1A
Name		B-Raf proto-oncogene, serine/threonine kinase	RAP1A, member of RAS oncogene family
Structure
GO Annotations	Cellular Component	Nucleus Cytoplasm Mitochondrion Cytosol Plasma Membrane Cilium Membrane Centriolar Satellite Ciliary Basal Body Neuron Projection Cell Body Presynapse Postsynapse Glutamatergic Synapse	Cytoplasm Endosome Early Endosome Late Endosome Cytosol Plasma Membrane Endosome Membrane Membrane Cell Junction Guanyl-nucleotide Exchange Factor Complex Specific Granule Membrane Neuron Projection Phagocytic Vesicle Perinuclear Region Of Cytoplasm Extracellular Exosome Anchoring Junction Sperm Midpiece Presynapse Glutamatergic Synapse
	Molecular Function	Nucleotide Binding Catalytic Activity Protein Kinase Activity Protein Serine/threonine Kinase Activity MAP Kinase Kinase Activity MAP Kinase Kinase Kinase Activity Calcium Ion Binding Protein Binding ATP Binding Zinc Ion Binding Kinase Activity Transferase Activity Small GTPase Binding Identical Protein Binding Metal Ion Binding Scaffold Protein Binding Protein Serine Kinase Activity	Nucleotide Binding GTPase Activity G Protein Activity Guanyl-nucleotide Exchange Factor Activity Protein Binding GTP Binding Hydrolase Activity GDP Binding Small GTPase Binding Protein-containing Complex Binding
	Biological Process	MAPK Cascade Myeloid Progenitor Cell Differentiation Protein Phosphorylation Signal Transduction Epidermal Growth Factor Receptor Signaling Pathway Visual Learning Animal Organ Morphogenesis Positive Regulation Of Gene Expression Negative Regulation Of Fibroblast Migration Positive Regulation Of D-glucose Transmembrane Transport Synaptic Vesicle Exocytosis Cell Differentiation Thyroid Gland Development T Cell Differentiation In Thymus Positive Regulation Of Peptidyl-serine Phosphorylation Substrate Adhesion-dependent Cell Spreading Somatic Stem Cell Population Maintenance Regulation Of Cell Population Proliferation Negative Regulation Of Apoptotic Process Stress Fiber Assembly CD4-positive, Alpha-beta T Cell Differentiation Positive T Cell Selection CD4-positive Or CD8-positive, Alpha-beta T Cell Lineage Commitment Negative Regulation Of Neuron Apoptotic Process Regulation Of T Cell Differentiation Alpha-beta T Cell Differentiation Thymus Development Regulation Of Axon Regeneration Positive Regulation Of Axon Regeneration Positive Regulation Of Axonogenesis T Cell Receptor Signaling Pathway Positive Regulation Of Stress Fiber Assembly Long-term Synaptic Potentiation Head Morphogenesis Face Development ERK1 And ERK2 Cascade Positive Regulation Of ERK1 And ERK2 Cascade Cellular Response To Calcium Ion Cellular Response To Xenobiotic Stimulus Endothelial Cell Apoptotic Process Establishment Of Protein Localization To Membrane Postsynaptic Modulation Of Chemical Synaptic Transmission Positive Regulation Of Substrate Adhesion-dependent Cell Spreading Negative Regulation Of Synaptic Vesicle Exocytosis Negative Regulation Of Endothelial Cell Apoptotic Process	Signal Transduction Small GTPase-mediated Signal Transduction Nervous System Development Response To Carbohydrate Positive Regulation Of Neuron Projection Development Synaptic Vesicle Exocytosis Rap Protein Signal Transduction Negative Regulation Of Collagen Biosynthetic Process Nerve Growth Factor Signaling Pathway Positive Regulation Of GTPase Activity Positive Regulation Of Protein Kinase Activity Positive Regulation Of D-glucose Import Positive Regulation Of Phagocytosis Positive Regulation Of Fc Receptor Mediated Stimulatory Signaling Pathway Establishment Of Endothelial Barrier Positive Regulation Of ERK1 And ERK2 Cascade Cellular Response To CAMP Protein Localization To Plasma Membrane Response To Antineoplastic Agent Liver Regeneration Regulation Of Neurotransmitter Receptor Localization To Postsynaptic Specialization Membrane Regulation Of Cell Junction Assembly Cellular Response To Forskolin Cellular Response To Nerve Growth Factor Stimulus Negative Regulation Of Synaptic Vesicle Exocytosis Positive Regulation Of Vasculogenesis
Pathways		Spry regulation of FGF signaling Frs2-mediated activation Frs2-mediated activation ARMS-mediated activation Signalling to p38 via RIT and RIN RAF activation MAP2K and MAPK activation Negative feedback regulation of MAPK pathway Negative regulation of MAPK pathway Signaling by moderate kinase activity BRAF mutants Signaling by high-kinase activity BRAF mutants Signaling by BRAF and RAF1 fusions Paradoxical activation of RAF signaling by kinase inactive BRAF Signaling downstream of RAS mutants Signaling by RAF1 mutants SHOC2 M1731 mutant abolishes MRAS complex function Gain-of-function MRAS complexes activate RAF signaling	Frs2-mediated activation Frs2-mediated activation ARMS-mediated activation ARMS-mediated activation Integrin signaling GRB2:SOS provides linkage to MAPK signaling for Integrins p130Cas linkage to MAPK signaling for integrins Glucagon-like Peptide-1 (GLP1) regulates insulin secretion Rap1 signalling MAP2K and MAPK activation Neutrophil degranulation Signaling by moderate kinase activity BRAF mutants Signaling by high-kinase activity BRAF mutants Signaling by BRAF and RAF1 fusions Paradoxical activation of RAF signaling by kinase inactive BRAF MET activates RAP1 and RAC1 Signaling downstream of RAS mutants Signaling by RAF1 mutants
Drugs		Sorafenib XL281 RAF-265 PLX-4720 N-{2,4-difluoro-3-[(5-pyridin-3-yl-1H-pyrrolo[2,3-b]pyridin-3-yl)carbonyl]phenyl}ethanesulfonamide (1E)-5-(1-piperidin-4-yl-3-pyridin-4-yl-1H-pyrazol-4-yl)-2,3-dihydro-1H-inden-1-one oxime Vemurafenib Regorafenib Dabrafenib Encorafenib Fostamatinib Ripretinib	None
Diseases		Malignant melanoma Noonan syndrome and related disorders, including: Noonan syndrome (NS); Leopard syndrome (LS); Noonan syndrome-like with loose anagen hair (NS/LAH); CBL-mutation associated syndrome (CBL); Neurofibromatosis type 1 (NF1); Neurofibromatosis type 2 (NF2); Neurofibromatosis-Noonan syndrome (NFNS); Legius syndrome; Cardiofaciocutaneous syndrome (CFCS); Costello syndrome (CS) Thyroid cancer	None
GWAS		Anorexia nervosa, attention-deficit/hyperactivity disorder, autism spectrum disorder, bipolar disorder, major depression, obsessive-compulsive disorder, schizophrenia, or Tourette syndrome (pleiotropy) ( 31835028 ) Bipolar disorder ( 31043756 ) Cerebrospinal fluid t-tau:AB1-42 ratio ( 26252872 ) Cerebrospinal T-tau levels ( 26252872 ) Longevity ( 33657282 ) Mild influenza (H1N1) infection ( 26379185 ) Response to Vitamin E supplementation ( 22437554 ) Type 2 diabetes ( 28869590 32499647 )	Cognitive ability, years of educational attainment or schizophrenia (pleiotropy) ( 31374203 ) Crohn's disease ( 30500874 32581322 ) High altitude adaptation ( 28373541 ) Lymphocyte count ( 32888494 ) Osteoporosis-related phenotypes ( 20548944 )
Interacting Genes		44 interacting genes: AKT1 AURKA BAD CCDC88A CTSV FBP1 HRAS HSD17B3 ITCH LATS2 MAP2K1 MAP2K2 MAP2K3 MAP2K6 MAPK1 MAPK3 MRAS NANOG OIP5 PAK2 PEBP1 PPP2CA PPP2R2A PRKACA PRKCE RAF1 RAP1A RAP1GAP RASSF1 RHEB SFN SGK1 SPOP SPRY2 STK11 TERF1 TERT YWHAB YWHAG YWHAH YWHAQ YWHAZ ZNF189 ZNF510	43 interacting genes: AFDN APBB1IP ARHGEF1 BIN1 BMX BRAF ELOA FADD FAF1 FAS GABARAPL2 GANAB HDAC1 HSPA1A HSPA4 KRIT1 MTNR1A NTRK1 PDE6D PPP2R1A PRKACA RABAC1 RAF1 RALGDS RAP1GAP RAP1GDS1 RAPGEF1 RAPGEF2 RAPGEF3 RAPGEF4 RAPGEF5 RAPGEF6 RASA1 RASA3 RASGRP2 RASGRP4 RASIP1 RGL4 RGS14 RUNDC3A SMARCA2 SMARCA4 TNFRSF10C
Entrez ID		673	5906
HPRD ID		01264	01545
Ensembl ID		ENSG00000157764	ENSG00000116473
Uniprot IDs		A0A2R8Y8E0 A0A2U3TZI2 H7C560 P15056	A8KAH9 P62834
PDB IDs		1UWH 1UWJ 2FB8 2L05 3C4C 3D4Q 3IDP 3II5 3NY5 3OG7 3PPJ 3PPK 3PRF 3PRI 3PSB 3PSD 3Q4C 3Q96 3SKC 3TV4 3TV6 4CQE 4DBN 4E26 4E4X 4EHE 4EHG 4FC0 4FK3 4G9C 4G9R 4H58 4JVG 4KSP 4KSQ 4MBJ 4MNE 4MNF 4PP7 4R5Y 4RZV 4RZW 4WO5 4XV1 4XV2 4XV3 4XV9 4YHT 5C9C 5CSW 5CSX 5CT7 5FD2 5HI2 5HID 5HIE 5ITA 5J17 5J18 5J2R 5JRQ 5JSM 5JT2 5VAL 5VAM 5VR3 5VYK 6B8U 6CAD 6N0P 6N0Q 6NSQ 6NYB 6P3D 6P7G 6PP9 6Q0J 6Q0K 6Q0T 6U2G 6U2H 6UAN 6UUO 6V2U 6V2W 6V34 6XAG 6XFP 6XLO 7K0V 7M0T 7M0U 7M0V 7M0W 7M0X 7M0Y 7M0Z 7MFD 7MFE 7MFF 7P3V 7SHV 7ZR0 7ZR5 7ZR6 8C7X 8C7Y 8DGS 8DGT 8F7O 8F7P 8QQG 9AXX 9AXY 9BFB 9F35	1C1Y 1GUA 3KUC 4KVG
GO Terms Enriched among Interactors		Intracellular Signal Transduction Regulation Of Intracellular Signal Transduction Protein Serine Kinase Activity Intracellular Signaling Cassette Regulation Of Phosphorus Metabolic Process Regulation Of Signal Transduction Protein Serine/threonine Kinase Activity Regulation Of Protein Modification Process Regulation Of Cell Communication Regulation Of Signaling Regulation Of Protein Metabolic Process Regulation Of Protein Phosphorylation Regulation Of Primary Metabolic Process Protein Kinase Activity Regulation Of Cellular Component Organization Regulation Of Phosphorylation Protein Phosphorylation Regulation Of Macromolecule Metabolic Process Regulation Of MAPK Cascade Schwann Cell Development Regulation Of Metabolic Process Phosphorylation ERBB3 Signaling Pathway ERBB2-ERBB3 Signaling Pathway MAPK Cascade Kinase Activity Regulation Of Golgi Inheritance Protein Serine/threonine/tyrosine Kinase Activity Regulation Of Catalytic Activity Protein Kinase Binding Positive Regulation Of Protein Metabolic Process Negative Regulation Of Metabolic Process Insulin-like Growth Factor Receptor Signaling Pathway Positive Regulation Of Protein Phosphorylation Regulation Of Cell Differentiation Regulation Of Protein Kinase Activity Regulation Of Cellular Localization Regulation Of Protein Localization Positive Regulation Of Cell Communication Positive Regulation Of Signaling Signal Transduction Positive Regulation Of Signal Transduction Positive Regulation Of Phosphorylation Regulation Of Kinase Activity Positive Regulation Of Cellular Component Organization Cytosol Trachea Formation Positive Regulation Of Intracellular Signal Transduction TOR Signaling Positive Regulation Of Protein Modification Process	GTPase Regulator Activity Ras Protein Signal Transduction Small GTPase-mediated Signal Transduction Guanyl-nucleotide Exchange Factor Activity Signal Transduction Intracellular Signaling Cassette Intracellular Signal Transduction Regulation Of Intracellular Signal Transduction Regulation Of GTPase Activity Plasma Membrane Establishment Of Endothelial Barrier Endothelial Cell Development Positive Regulation Of GTPase Activity CD95 Death-inducing Signaling Complex Positive Regulation Of Hydrolase Activity Neurotrophin Signaling Pathway Epithelial Cell Development Rap Protein Signal Transduction Regulation Of Microvillus Assembly GTPase Binding Regulation Of Signal Transduction Regulation Of Apoptotic Process Cytosol Extrinsic Apoptotic Signaling Pathway Via Death Domain Receptors Regulation Of Cell Communication Regulation Of Signaling Small GTPase Binding Nerve Growth Factor Signaling Pathway Establishment Of Endothelial Intestinal Barrier Death-inducing Signaling Complex Assembly Diacylglycerol Binding Regulation Of Programmed Cell Death Regulation Of Catalytic Activity Positive Regulation Of Cell Communication Positive Regulation Of Signaling CAMP Binding Fas Signaling Pathway Protein-containing Complex Organization Cytoplasm Positive Regulation Of Cellular Component Biogenesis Regulation Of Developmental Process Protein-containing Complex Assembly GTPase Activator Activity Regulation Of Cellular Component Organization Regulation Of Apoptotic Signaling Pathway Regulation Of Extrinsic Apoptotic Signaling Pathway Positive Regulation Of Programmed Cell Death Nucleosome Array Spacer Activity Positive Regulation Of Microvillus Assembly Regulation Of Cell Differentiation