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CALCOCO2 and DDX6
Number of citations of the paper that reports this interaction (PubMedID
25416956
)
56
Data Source:
BioGRID
(two hybrid, two hybrid)
CALCOCO2
DDX6
Description
calcium binding and coiled-coil domain 2
DEAD-box helicase 6
Image
GO Annotations
Cellular Component
Autophagosome Membrane
Nucleus
Cytoplasm
Autophagosome
Cytosol
Cytoskeleton
Membrane
PML Body
Cytoplasmic Vesicle
Perinuclear Region Of Cytoplasm
Heterochromatin
P-body
Outer Dense Fiber
Nucleus
Cytoplasm
Cytosol
Plasma Membrane
Adherens Junction
Cytoplasmic Stress Granule
Membrane
RISC Complex
Chromatoid Body
Cytoplasmic Ribonucleoprotein Granule
Perinuclear Region Of Cytoplasm
Concave Side Of Sperm Head
Sperm Annulus
Molecular Function
Protein Binding
Zinc Ion Binding
Protein Homodimerization Activity
Metal Ion Binding
Nucleotide Binding
Nucleic Acid Binding
RNA Binding
RNA Helicase Activity
MRNA Binding
Helicase Activity
Protein Binding
ATP Binding
Hydrolase Activity
ATP Hydrolysis Activity
Protein Domain Specific Binding
Cadherin Binding
Biological Process
Autophagy
Viral Process
Response To Type II Interferon
Xenophagy
Positive Regulation Of Autophagosome Maturation
Spermatogenesis
Negative Regulation Of Translation
Viral RNA Genome Packaging
Stem Cell Population Maintenance
Neuron Differentiation
P-body Assembly
Stress Granule Assembly
MiRNA-mediated Gene Silencing By Inhibition Of Translation
Negative Regulation Of Neuron Differentiation
Spermatid Differentiation
Pathways
mRNA decay by 5' to 3' exoribonuclease
Drugs
D-tartaric acid
Diseases
GWAS
Appendicular lean mass (
33097823
)
Blood protein levels (
30072576
)
Chronotype (
30696823
)
Liver enzyme levels (alkaline phosphatase) (
33972514
)
Serum alkaline phosphatase levels (
33547301
)
Type 2 diabetes (
29358691
29632382
)
Type 2 diabetes (adjusted for BMI) (
29632382
)
Allergic disease (asthma, hay fever and/or eczema) (age of onset) (
32603359
)
Allergic disease (asthma, hay fever and/or eczema) (multivariate analysis) (
32603359
)
Allergic disease (asthma, hay fever or eczema) (
29083406
)
Allergic rhinitis (
30013184
)
Allergy (
27182965
)
Asthma (
34103634
30929738
31619474
31959851
)
Asthma (age of onset) (
31036433
)
Asthma (childhood onset) (
31036433
30929738
)
Asthma onset (childhood vs adult) (
30929738
)
Autoimmune traits (pleiotropy) (
30572963
)
Blood protein levels (
30072576
)
Celiac disease (
22057235
)
Celiac disease and Rheumatoid arthritis (
26546613
)
Celiac disease or Rheumatoid arthritis (
21383967
)
Diffuse cutaneous systemic sclerosis (
24387989
)
Height (
25429064
)
Hip minimal joint space width (
27701424
)
Monocyte percentage of white cells (
32888494
)
Multiple sclerosis (
31604244
)
Non-albumin protein levels (
29403010
)
Primary biliary cholangitis (
28425483
)
Primary biliary cirrhosis (
22961000
)
Refractive error (
32231278
)
Rheumatoid arthritis (
23143596
)
Rheumatoid arthritis (ACPA-positive) (
24532676
23143596
)
Systemic lupus erythematosus (
19838195
28714469
)
Systemic sclerosis (
31672989
24387989
)
Vitiligo (
22951725
)
Interacting Genes
182 interacting genes:
ABLIM1
ADSL
AMMECR1
AP5B1
APEX2
ARHGEF39
ARHGEF5
ARNT2
ATG5
ATOSB
AXIN1
BAHD1
BCL6B
CBX8
CCDC120
CCDC185
CCDC33
CCNH
CDC7
CELA2B
CEP57L1
CHCHD3
CNNM3
CPNE7
CWF19L2
DAXX
DAZAP2
DBNDD2
DCTN4
DCX
DDIT4L
DDX6
DOCK2
DUSP12
DUSP26
EEF1E1
EFHC1
ELOA2
ENKD1
ENTREP1
EXOSC5
FAM107A
FAM161A
FAM168A
FAM90A1
FARS2
FASTK
FBF1
FBXL18
FKBPL
FMR1
FNDC11
FOXD4L3
FUBP3
FXR2
GABARAPL1
GABARAPL2
GATAD2B
GCA
GEMIN4
GIT2
GLYCTK
HDAC4
HDAC7
HLX
HNRNPA1
HNRNPK
HNRNPLL
HOXB5
HOXB9
IL16
IQUB
KANSL1
KAT7
KLHL35
KLHL42
LENG1
LGALS8
LIMS2
LITAF
LMF2
LMO2
LMO4
LNX1
LONRF1
LSM4
MAGOHB
MAP1LC3C
MCM10
METTL17
MID2
MOS
MTPAP
MVP
MXI1
MYH6
MYO6
NAA10
NDN
NFU1
ORC5
PCGF1
PEF1
PEG10
PFDN5
PHF1
PIAS4
POLI
POLR2A
PPP1R18
PRKAA2
PRKAB2
PRPF18
PRPF31
PSMA1
PSME4
PTBP1
PTBP2
RAB35
RABL6
RB1CC1
RBM15
RHPN1
RIN1
RNF11
RPA2
RPL9
RPS27A
RTN4IP1
RTP5
RXRB
SCAND1
SCNM1
SDCBP
SETD5
SHC1
SLC15A3
SMARCD1
SMCP
SNRPB
SPATA24
SRI
STAMBPL1
STK16
TACO1
TBC1D22B
TBRG4
TCL1A
TEKT3
TENT2
TLE5
TNFAIP3
TP53RK
TRAF2
TRAF4
TSC1
TSGA10IP
TTC23L
UBAC2
UBC
ULK1
USP2
VARS1
VPS72
WWP2
ZBTB4
ZC2HC1C
ZNF101
ZNF205
ZNF337
ZNF408
ZNF414
ZNF426
ZNF451
ZNF564
ZNF581
ZNF638
ZNF648
ZNF688
ZNF696
ZNF774
ZNF80
75 interacting genes:
BEGAIN
BEND7
BIRC7
CALCOCO2
CCDC136
CCDC14
CEBPA
CEP70
CEP76
CNKSR3
CNOT1
DDX17
DES
DISC1
DNAAF11
EDC3
EFHC2
ENTR1
FCHO1
GOLGA2
GPRASP3
HOOK2
IK
IKZF1
INKA1
JAKMIP1
JUP
KLC4
KRT34
KRT40
KRTAP10-3
KRTAP10-8
LZTS1
MAGED1
MESD
MTUS2
NAB2
NONO
PAK5
PDLIM7
PICK1
PNMA5
POU6F2
PRDM16
PRPH
RAPGEF3
RBM11
RBM14
REL
RO60
RUNDC3A
SCYL1
SHMT1
SLAIN1
SORBS3
SPATA6
SRPK2
STAT1
TCF12
TCF4
TLE5
TP53BP2
TRAF2
TRIM27
TRIM37
TRIM54
U2AF2
USH1G
VPS52
ZBTB10
ZBTB14
ZBTB43
ZBTB8A
ZC2HC1C
ZNF24
Entrez ID
10241
1656
HPRD ID
06846
02638
Ensembl ID
ENSG00000136436
ENSG00000110367
Uniprot IDs
Q13137
B2R858
P26196
PDB IDs
2MXP
3VVV
3VVW
4GXL
4HAN
4XKL
5AAQ
5Z7A
5Z7L
7EAA
1VEC
2WAX
2WAY
4CRW
4CT4
4CT5
5ANR
6F9S
6S8S
Enriched GO Terms of Interacting Partners
?
Protein Binding
Nucleus
Regulation Of Nucleobase-containing Compound Metabolic Process
Nucleoplasm
Regulation Of RNA Metabolic Process
Regulation Of Primary Metabolic Process
Regulation Of Macromolecule Metabolic Process
Regulation Of Gene Expression
Regulation Of Metabolic Process
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Regulation Of Macromolecule Biosynthetic Process
Zinc Ion Binding
Cellular Response To Nitrogen Starvation
Ubiquitin Protein Ligase Binding
MRNA Processing
MRNA Metabolic Process
MRNA Binding
Regulation Of RNA Splicing
Cytoplasm
RNA Splicing
Negative Regulation Of Macromolecule Biosynthetic Process
Nucleic Acid Metabolic Process
RNA Metabolic Process
Metal Ion Binding
Regulation Of Transcription By RNA Polymerase II
DNA Binding
Chromatin Organization
Negative Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Biosynthetic Process
Cellular Response To Nutrient Levels
RNA Processing
Macromolecule Metabolic Process
Response To Starvation
Autophagy Of Mitochondrion
Spliceosomal Complex
Epigenetic Regulation Of Gene Expression
Negative Regulation Of RNA Metabolic Process
Nuclear Speck
Regulation Of MRNA Metabolic Process
Autophagosome
Autophagosome Membrane
Negative Regulation Of Metabolic Process
Regulation Of Translation At Presynapse, Modulating Synaptic Transmission
SnRNP Binding
Mitophagy
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Phosphatidylethanolamine Binding
Negative Regulation Of Gene Expression
Cytoplasmic Stress Granule
Cytoskeleton
Identical Protein Binding
Protein Binding
Intermediate Filament
Cytoplasm
Negative Regulation Of RNA Metabolic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of RNA Biosynthetic Process
Microtubule
Nuclear Speck
Regulation Of MRNA Splicing, Via Spliceosome
Regulation Of Centriole Replication
Transcription Coactivator Activity
Intermediate Filament Organization
Regulation Of MRNA Processing
Regulation Of RNA Metabolic Process
Cytosol
Negative Regulation Of Centriole Replication
Aggresome
Tumor Necrosis Factor Receptor Binding
Negative Regulation Of Metabolic Process
Regulation Of Cytoskeleton Organization
Regulation Of Transcription By RNA Polymerase II
DNA-binding Transcription Factor Activity
Regulation Of Organelle Organization
Regulation Of MRNA Metabolic Process
Centrosome
Intermediate Filament Cytoskeleton Organization
Intermediate Filament-based Process
Keratin Filament
Tagcloud
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Tagcloud (Difference)
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Tagcloud (Intersection)
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