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CALCOCO2 and LMO4
Number of citations of the paper that reports this interaction (PubMedID
25416956
)
56
Data Source:
BioGRID
(two hybrid)
CALCOCO2
LMO4
Description
calcium binding and coiled-coil domain 2
LIM domain only 4
Image
GO Annotations
Cellular Component
Autophagosome Membrane
Nucleus
Cytoplasm
Autophagosome
Cytosol
Cytoskeleton
Membrane
PML Body
Cytoplasmic Vesicle
Perinuclear Region Of Cytoplasm
Nucleus
Transcription Regulator Complex
Cell Leading Edge
RNA Polymerase II Transcription Regulator Complex
Molecular Function
Protein Binding
Zinc Ion Binding
Protein Homodimerization Activity
Metal Ion Binding
Transcription Coregulator Activity
Transcription Corepressor Activity
Protein Binding
Metal Ion Binding
DNA-binding Transcription Factor Binding
Biological Process
Autophagy
Viral Process
Response To Type II Interferon
Xenophagy
Positive Regulation Of Autophagosome Maturation
Negative Regulation Of Transcription By RNA Polymerase II
Neural Tube Closure
Ventricular Septum Development
Regulation Of Transcription By RNA Polymerase II
Motor Neuron Axon Guidance
Tissue Development
Ventral Spinal Cord Interneuron Differentiation
Spinal Cord Motor Neuron Cell Fate Specification
Spinal Cord Motor Neuron Differentiation
Spinal Cord Association Neuron Differentiation
Regulation Of Cell Migration
Negative Regulation Of Protein-containing Complex Assembly
Positive Regulation Of Kinase Activity
Regulation Of Cell Fate Specification
Positive Regulation Of Transcription By RNA Polymerase II
Thymus Development
Regulation Of Developmental Process
Regulation Of Cell Activation
Pathways
Drugs
Diseases
GWAS
Appendicular lean mass (
33097823
)
Blood protein levels (
30072576
)
Chronotype (
30696823
)
Liver enzyme levels (alkaline phosphatase) (
33972514
)
Serum alkaline phosphatase levels (
33547301
)
Type 2 diabetes (
29358691
29632382
)
Type 2 diabetes (adjusted for BMI) (
29632382
)
Academic attainment (English) (
33594131
)
Age at first sexual intercourse (
34211149
)
Alanine aminotransferase levels (
33547301
)
Angiotensin-converting enzyme inhibitor intolerance (
28030426
)
Aspartate aminotransferase levels (
33547301
)
Breast cancer (
27354352
)
Eosinophil count (
29403010
)
Gait rhythm (
26219847
)
Glaucoma (primary open-angle) (
29891935
)
Photic sneeze reflex (
27182965
)
Prostate-specific antigen levels (
28139693
)
Response to TNF antagonist treatment (
18615156
)
Resting heart rate (
27798624
)
White blood cell count (basophil) (
29403010
)
White blood cell types (
21738478
)
Interacting Genes
182 interacting genes:
ABLIM1
ADSL
AMMECR1
AP5B1
APEX2
ARHGEF39
ARHGEF5
ARNT2
ATG5
ATOSB
AXIN1
BAHD1
BCL6B
CBX8
CCDC120
CCDC185
CCDC33
CCNH
CDC7
CELA2B
CEP57L1
CHCHD3
CNNM3
CPNE7
CWF19L2
DAXX
DAZAP2
DBNDD2
DCTN4
DCX
DDIT4L
DDX6
DOCK2
DUSP12
DUSP26
EEF1E1
EFHC1
ELOA2
ENKD1
ENTREP1
EXOSC5
FAM107A
FAM161A
FAM168A
FAM90A1
FARS2
FASTK
FBF1
FBXL18
FKBPL
FMR1
FNDC11
FOXD4L3
FUBP3
FXR2
GABARAPL1
GABARAPL2
GATAD2B
GCA
GEMIN4
GIT2
GLYCTK
HDAC4
HDAC7
HLX
HNRNPA1
HNRNPK
HNRNPLL
HOXB5
HOXB9
IL16
IQUB
KANSL1
KAT7
KLHL35
KLHL42
LENG1
LGALS8
LIMS2
LITAF
LMF2
LMO2
LMO4
LNX1
LONRF1
LSM4
MAGOHB
MAP1LC3C
MCM10
METTL17
MID2
MOS
MTPAP
MVP
MXI1
MYH6
MYO6
NAA10
NDN
NFU1
ORC5
PCGF1
PEF1
PEG10
PFDN5
PHF1
PIAS4
POLI
POLR2A
PPP1R18
PRKAA2
PRKAB2
PRPF18
PRPF31
PSMA1
PSME4
PTBP1
PTBP2
RAB35
RABL6
RB1CC1
RBM15
RHPN1
RIN1
RNF11
RPA2
RPL9
RPS27A
RTN4IP1
RTP5
RXRB
SCAND1
SCNM1
SDCBP
SETD5
SHC1
SLC15A3
SMARCD1
SMCP
SNRPB
SPATA24
SRI
STAMBPL1
STK16
TACO1
TBC1D22B
TBRG4
TCL1A
TEKT3
TENT2
TLE5
TNFAIP3
TP53RK
TRAF2
TRAF4
TSC1
TSGA10IP
TTC23L
UBAC2
UBC
ULK1
USP2
VARS1
VPS72
WWP2
ZBTB4
ZC2HC1C
ZNF101
ZNF205
ZNF337
ZNF408
ZNF414
ZNF426
ZNF451
ZNF564
ZNF581
ZNF638
ZNF648
ZNF688
ZNF696
ZNF774
ZNF80
131 interacting genes:
AARD
ABI2
ADAMTSL4
AMOT
AMOTL2
ARNT2
BANP
BBS2
BCAS2
BIRC7
BRCA1
CALCOCO2
CCDC102B
CCDC120
CEP170P1
COG6
CRNN
CRYBB2
CSNK2B
CTBP2
CYSRT1
DDB1
DEAF1
DES
ECM1
ERCC6L
EXOSC8
FAM228A
FHL3
GABPB1
GADD45A
GOLGA2
GOLGA6L9
GRHL2
GSK3B
HELT
HGS
HSF2BP
ID3
IKZF1
IKZF3
ITSN1
KANK2
KATNBL1
KIAA1958
KIF3B
KPNA1
KRT15
KRT31
KRT33B
KRT34
KRT38
KRT39
KRT40
KRT74
KRT75
KRT76
KRTAP11-1
KRTAP3-1
KYNU
L3MBTL3
LASP1
LDB1
LDB2
LMO2
LZTS1
MCCD1
MERTK
METTL27
MID2
MTA1
MTUS2
MYOD1
MYOZ3
N4BP3
NFKBID
NFYC
NHLH1
NME4
NONO
NRF1
PDE4DIP
PELO
PER2
PITPNB
PLK1
PPARG
QRICH1
RBAK
RBBP8
RBPMS
RCN1
REDIC1
RLIM
RNF8
ROPN1
RPS6KA6
RSPH6A
SAXO4
SEC24D
SLC15A2
SMAD4
SMAD9
STAT5B
SUOX
TCF21
TCF4
TEX14
TFIP11
TINAGL1
TLE5
TNFSF11
TP53BP2
TRAF5
TRIM27
TRIM54
TSEN15
TTLL7
UBQLN2
VMAC
VPS52
WASHC1
ZBTB43
ZMYND12
ZNF135
ZNF202
ZNF213
ZNF397
ZNF410
ZNF467
ZNF675
Entrez ID
10241
8543
HPRD ID
06846
09122
Ensembl ID
ENSG00000136436
ENSG00000143013
Uniprot IDs
Q13137
P61968
PDB IDs
2MXP
3VVV
3VVW
4GXL
4HAN
4XKL
5AAQ
5Z7A
5Z7L
7EAA
9F5B
Enriched GO Terms of Interacting Partners
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Protein Binding
Nucleus
Regulation Of Nucleobase-containing Compound Metabolic Process
Nucleoplasm
Regulation Of RNA Metabolic Process
Regulation Of Primary Metabolic Process
Regulation Of Macromolecule Metabolic Process
Regulation Of Gene Expression
Regulation Of Metabolic Process
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Regulation Of Macromolecule Biosynthetic Process
Zinc Ion Binding
Cellular Response To Nitrogen Starvation
Ubiquitin Protein Ligase Binding
MRNA Processing
MRNA Metabolic Process
MRNA Binding
Regulation Of RNA Splicing
Cytoplasm
RNA Splicing
Negative Regulation Of Macromolecule Biosynthetic Process
Nucleic Acid Metabolic Process
RNA Metabolic Process
Metal Ion Binding
Regulation Of Transcription By RNA Polymerase II
DNA Binding
Chromatin Organization
Negative Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Biosynthetic Process
Cellular Response To Nutrient Levels
RNA Processing
Macromolecule Metabolic Process
Response To Starvation
Autophagy Of Mitochondrion
Spliceosomal Complex
Epigenetic Regulation Of Gene Expression
Negative Regulation Of RNA Metabolic Process
Nuclear Speck
Regulation Of MRNA Metabolic Process
Autophagosome
Autophagosome Membrane
Negative Regulation Of Metabolic Process
Regulation Of Translation At Presynapse, Modulating Synaptic Transmission
SnRNP Binding
Mitophagy
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Phosphatidylethanolamine Binding
Negative Regulation Of Gene Expression
Cytoplasmic Stress Granule
Protein Binding
Intermediate Filament Organization
Keratin Filament
Structural Constituent Of Skin Epidermis
Intermediate Filament Cytoskeleton Organization
Intermediate Filament-based Process
Cytoskeleton Organization
Intermediate Filament
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Identical Protein Binding
Regulation Of Transcription By RNA Polymerase II
Regulation Of RNA Metabolic Process
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of RNA Biosynthetic Process
Negative Regulation Of RNA Metabolic Process
Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Structural Molecule Activity
Supramolecular Fiber Organization
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
Regulation Of Primary Metabolic Process
Organelle Organization
Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Metabolic Process
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Gene Expression
Transcription Regulator Complex
Developmental Process
Negative Regulation Of Transcription By RNA Polymerase II
Negative Regulation Of Macromolecule Metabolic Process
Cytoskeleton
Regulation Of Metabolic Process
DNA Binding
Negative Regulation Of Macromolecule Biosynthetic Process
Positive Regulation Of RNA Biosynthetic Process
Positive Regulation Of DNA-templated Transcription
Negative Regulation Of Biosynthetic Process
Epithelial Cell Differentiation
RNA Polymerase II-specific DNA-binding Transcription Factor Binding
DNA-binding Transcription Factor Activity, RNA Polymerase II-specific
Centrosome Cycle
Positive Regulation Of RNA Metabolic Process
Microtubule-based Process
Microtubule Cytoskeleton Organization
DNA-binding Transcription Factor Activity
BHLH Transcription Factor Binding
Positive Regulation Of Transcription By RNA Polymerase II
Protein Dimerization Activity
RNA Polymerase II Transcription Regulator Complex
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Tagcloud (Difference)
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Tagcloud (Intersection)
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