VPS16 and HOOK1

Number of citations of the paper that reports this interaction (PubMedID 18799622)
36

Data Source:
BioGRID (affinity chromatography technology)
HPRD (in vivo)

		VPS16	HOOK1
Description		VPS16 core subunit of CORVET and HOPS complexes	hook microtubule tethering protein 1
Image			No pdb structure
GO Annotations	Cellular Component	Cytoplasm Lysosome Lysosomal Membrane Endosome Early Endosome Late Endosome Autophagosome Endosome Membrane Membrane Clathrin-coated Vesicle Axon HOPS Complex Cytoplasmic Vesicle Late Endosome Membrane CORVET Complex Neuronal Cell Body Recycling Endosome Presynapse Vesicle Tethering Complex	Cytoplasm Centrosome Cytoskeleton Microtubule Microtubule Cytoskeleton HOPS Complex FHF Complex
	Molecular Function	Actin Binding Protein Binding Actin Filament Binding	Actin Binding Protein Binding Microtubule Binding Identical Protein Binding Protein Homodimerization Activity Dynein Light Intermediate Chain Binding
	Biological Process	Intracellular Protein Transport Autophagy Vacuole Organization Endosome To Lysosome Transport Protein Transport Endosomal Transport Endosomal Vesicle Fusion Regulation Of SNARE Complex Assembly Vacuole Fusion, Non-autophagic Autophagosome Maturation	Golgi Organization Endosome Organization Lysosome Organization Spermatogenesis Spermatid Development Endosome To Lysosome Transport Protein Transport Cell Differentiation Cytoskeleton-dependent Intracellular Transport Cytoplasmic Microtubule Organization Early Endosome To Late Endosome Transport Manchette Assembly Protein Localization To Perinuclear Region Of Cytoplasm
Pathways		SARS-CoV-2 modulates autophagy
Drugs
Diseases
GWAS		Lymphocyte percentage of white cells ( 32888494) Metabolite levels ( 23823483)	Alcoholic chronic pancreatitis ( 28754779) Metabolite levels ( 23823483) Night sleep phenotypes ( 27126917)
Interacting Genes		18 interacting genes: AKTIP EXOC8 FBXO7 GNG13 HOOK1 HOOK2 HOOK3 MON1B RAB7A RILP STX1A STX7 UBC UVRAG VPS11 VPS18 VPS33A ZNF417	46 interacting genes: AKTIP ANK3 ANKRD23 AP1M1 AP4M1 CCDC9 CDC5L CDK4 CUL1 CWF19L2 DENND1B ESS2 EXOSC7 FAM161A FHIP1B HNRNPLL HOOK2 HOOK3 KAT5 LENG1 LMO2 MEOX2 PIAS2 PRPF6 RBM22 RNF10 RPS7 SNW1 TBC1D7 TFIP11 UNKL USP2 UTP14A UTP14C VPS16 VPS18 VPS39 VPS41 ZBTB47 ZNF250 ZNF35 ZNF572 ZNF655 ZNF764 ZNF785 ZNF80
Entrez ID		64601	51361
HPRD ID		12259	07428
Ensembl ID		ENSG00000215305	ENSG00000134709
Uniprot IDs		Q9H269	Q9UJC3
PDB IDs		4BX9
Enriched GO Terms of Interacting Partners?		Endosome To Lysosome Transport HOPS Complex Vesicle Organization Vacuolar Transport Lysosomal Transport Endosome Organization Early Endosome To Late Endosome Transport Vesicle-mediated Transport Establishment Of Protein Localization Protein Transport Late Endosome FHF Complex Protein Localization To Perinuclear Region Of Cytoplasm Cellular Localization Intracellular Transport Organelle Localization Membrane Docking Vacuole Organization Vesicle Fusion Organelle Membrane Fusion Intracellular Protein Localization Establishment Of Localization In Cell Organelle Fusion Vesicle Docking Lysosome Organization Membrane Fusion Organelle Localization By Membrane Tethering Dynein Light Intermediate Chain Binding CORVET Complex Organelle Organization Vesicle Docking Involved In Exocytosis Membrane Organization Endosomal Transport Lysosome Autophagy Late Endosome Membrane Regulation Of SNARE Complex Assembly Endosomal Vesicle Fusion Intracellular Protein Transport Autophagosome Lysosomal Membrane Endosome Endosome Membrane Cytoplasmic Vesicle Early Endosome Syntaxin Binding Chloride Channel Inhibitor Activity SNARE Binding Cytoplasmic Microtubule Organization Protein Modification By Small Protein Conjugation	HOPS Complex Endosome To Lysosome Transport Vacuolar Transport Lysosomal Transport FHF Complex Protein Localization To Perinuclear Region Of Cytoplasm Lysosome Organization Vacuole Organization Regulation Of SNARE Complex Assembly Endosomal Vesicle Fusion Catalytic Step 2 Spliceosome Vesicle Organization Early Endosome To Late Endosome Transport MRNA Splicing, Via Spliceosome RNA Splicing, Via Transesterification Reactions Clathrin-coated Vesicle AP-3 Adaptor Complex Endosome Organization RNA Processing Regulation Of Transcription By RNA Polymerase II Lysosomal HOPS Complex Protein Transport Endosomal Transport Spliceosomal Complex MRNA Processing Establishment Of Protein Localization MRNA Metabolic Process Zinc Ion Binding RNA Splicing U2-type Catalytic Step 2 Spliceosome Vesicle-mediated Transport Nucleus Intracellular Transport Regulation Of Macromolecule Metabolic Process RNA Metabolic Process CORVET Complex Regulation Of Gene Expression Vesicle Fusion Regulation Of Metabolic Process Nuclear Speck Organelle Membrane Fusion Regulation Of DNA-templated Transcription Positive Regulation Of RNA Splicing Regulation Of Macromolecule Biosynthetic Process Regulation Of RNA Biosynthetic Process Cellular Localization Regulation Of Primary Metabolic Process Nucleic Acid Metabolic Process Protein Targeting To Vacuole Clathrin Adaptor Complex
Tagcloud ?
Tagcloud (Difference) ?
Tagcloud (Intersection) ?