FEN1 and PCNA

Number of citations of the paper that reports this interaction (PubMedID 39578540)
67

Data Source:
BioGRID (x-ray crystallography)
HPRD (two hybrid, in vitro, in vivo)

		FEN1	PCNA
Description		flap structure-specific endonuclease 1	proliferating cell nuclear antigen
Image
GO Annotations	Cellular Component	Chromosome, Telomeric Region Nucleus Nucleoplasm Nucleolus Mitochondrion Membrane Protein-containing Complex	Cyclin-dependent Protein Kinase Holoenzyme Complex Chromosome, Telomeric Region Chromatin Male Germ Cell Nucleus Nucleus Nuclear Lamina Nucleoplasm Replication Fork Centrosome Nuclear Body Replisome Nuclear Replication Fork PCNA Complex Extracellular Exosome PCNA-p21 Complex
	Molecular Function	Magnesium Ion Binding DNA Binding Damaged DNA Binding Double-stranded DNA Binding Catalytic Activity Nuclease Activity Endonuclease Activity DNA Endonuclease Activity RNA-DNA Hybrid Ribonuclease Activity Exonuclease Activity Protein Binding Double-stranded DNA Exodeoxyribonuclease Activity 5'-3' Exonuclease Activity Hydrolase Activity Hydrolase Activity, Acting On Ester Bonds 5'-flap Endonuclease Activity Manganese Ion Binding Metal Ion Binding Flap Endonuclease Activity	Purine-specific Mismatch Base Pair DNA N-glycosylase Activity DNA Binding Chromatin Binding Damaged DNA Binding Protein Binding Enzyme Binding Nuclear Estrogen Receptor Binding DNA Polymerase Processivity Factor Activity Receptor Tyrosine Kinase Binding Dinucleotide Insertion Or Deletion Binding MutLalpha Complex Binding Histone Acetyltransferase Binding Identical Protein Binding Protein-containing Complex Binding DNA Polymerase Binding
	Biological Process	Double-strand Break Repair Via Homologous Recombination DNA Replication DNA Repair Base-excision Repair Base-excision Repair, Gap-filling Double-strand Break Repair DNA Recombination DNA Damage Response Memory UV Protection Telomere Maintenance Via Semi-conservative Replication DNA Replication, Removal Of RNA Primer Positive Regulation Of Sister Chromatid Cohesion	Negative Regulation Of Transcription By RNA Polymerase II DNA Replication Leading Strand Elongation Regulation Of DNA Replication DNA Repair Base-excision Repair, Gap-filling Mismatch Repair Chromatin Organization DNA Damage Response Response To Oxidative Stress Heart Development Translesion Synthesis Epithelial Cell Differentiation Replication Fork Processing Positive Regulation Of Deoxyribonuclease Activity Response To Estradiol Response To Lipid Cellular Response To UV Estrous Cycle Positive Regulation Of DNA Repair Positive Regulation Of DNA Replication Response To Cadmium Ion Cellular Response To Hydrogen Peroxide Cellular Response To Xenobiotic Stimulus Response To Dexamethasone Liver Regeneration Positive Regulation Of DNA-directed DNA Polymerase Activity Response To L-glutamate Mitotic Telomere Maintenance Via Semi-conservative Replication
Pathways		POLB-Dependent Long Patch Base Excision Repair Early Phase of HIV Life Cycle Removal of the Flap Intermediate from the C-strand PCNA-Dependent Long Patch Base Excision Repair HDR through MMEJ (alt-NHEJ) Removal of the Flap Intermediate	Translesion synthesis by REV1 Recognition of DNA damage by PCNA-containing replication complex Translesion Synthesis by POLH Transcription of E2F targets under negative control by DREAM complex Polymerase switching on the C-strand of the telomere Processive synthesis on the C-strand of the telomere Telomere C-strand (Lagging Strand) Synthesis Removal of the Flap Intermediate from the C-strand SUMOylation of DNA replication proteins Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha) Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta) PCNA-Dependent Long Patch Base Excision Repair Translesion synthesis by POLK Translesion synthesis by POLI Termination of translesion DNA synthesis HDR through Homologous Recombination (HRR) Gap-filling DNA repair synthesis and ligation in GG-NER Dual Incision in GG-NER Dual incision in TC-NER Gap-filling DNA repair synthesis and ligation in TC-NER TP53 Regulates Transcription of Genes Involved in G2 Cell Cycle Arrest Polymerase switching Removal of the Flap Intermediate Processive synthesis on the lagging strand G1/S-Specific Transcription E3 ubiquitin ligases ubiquitinate target proteins
Drugs		Iron Ferrous gluconate Ferrous succinate Ferrous ascorbate Ferrous fumarate Ferrous glycine sulfate	Liothyronine Acetylsalicylic acid
Diseases
GWAS		Asthma ( 31619474 31959851) Bipolar disorder ( 28115744 31043756) Bipolar I disorder ( 31043756) Brain morphology (MOSTest) ( 32665545) Colorectal cancer ( 24836286) Colorectal cancer or advanced adenoma ( 30510241) Crohn's disease ( 28067908) Daytime nap ( 33568662) Delta-5 desaturase activity response to n3-polyunsaturated fat supplement ( 29246731) Electrocardiogram morphology (amplitude at temporal datapoints) ( 32916098) Hemoglobin levels ( 32327693) Laryngeal squamous cell carcinoma ( 25194280) Male-pattern baldness ( 28196072) Metabolite levels ( 23378610 23823483) Oleic acid (18:1n-9) levels ( 23362303) Palmitoleic acid (16:1n-7) levels ( 23362303) Plasma omega-3 polyunsaturated fatty acid level (eicosapentaenoic acid) ( 21829377) Plasma omega-3 polyunsaturated fatty acid levels (alphalinolenic acid) ( 21829377) Plasma omega-3 polyunsaturated fatty acid levels (docosapentaenoic acid) ( 21829377) Plasma omega-6 polyunsaturated fatty acid levels (adrenic acid) ( 24823311) Plasma omega-6 polyunsaturated fatty acid levels (arachidonic acid) ( 24823311) Plasma omega-6 polyunsaturated fatty acid levels (dihomo-gamma-linolenic acid) ( 24823311) Plasma omega-6 polyunsaturated fatty acid levels (gamma-linolenic acid) ( 24823311) Plasma omega-6 polyunsaturated fatty acid levels (linoleic acid) ( 24823311) Platelet count ( 22139419) QT interval ( 29874175) Red blood cell fatty acid levels ( 25500335) Refractive error ( 32231278) Resting heart rate ( 27798624) Serum metabolite levels ( 23093944) Serum metabolite ratios in chronic kidney disease ( 29545352) Stearic acid (18:0) levels ( 23362303)
Interacting Genes		20 interacting genes: APEX1 APP ARHGDIA BLM CCNA2 CDK1 CDK2 CEBPA EEF1G EP300 GSK3B HNRNPA1 HUS1 OGT PCNA RAD1 RAD9A TERF1 WDR4 WRN	142 interacting genes: ALDOA APEX1 APEX2 ATAD5 ATM BAZ1B CBX1 CCNB1 CCND1 CCND3 CCNO CDC25C CDC6 CDK1 CDK2 CDK5 CDK6 CDKN1A CDKN1C CDKN2A CDT1 CHAF1A CHTF18 CHTF8 CMTM5 CREBBP DHX9 DNMT1 DNTT DNTTIP2 DSCC1 DTL EGFR ENO1 EP300 ERCC5 ERCC6 ERRFI1 ESCO2 EXO1 FAN1 FANCD2 FANCL FBH1 FEN1 GADD45A GADD45B GADD45G GAPDH GCK GPI HDAC1 HUS1 ING1 KCTD13 KMT5A LDHA LIG1 MCL1 MGMT MLH1 MLH3 MSH2 MSH3 MSH6 MTOR MUTYH MYBBP1A NEDD8 NIPBL NMRAL1 NSD2 NTHL1 NUTF2 PARP1 PARP10 PARPBP PCLAF PFKM PGAM1 PGK1 PKLR PMS2 POLB POLD1 POLD2 POLD3 POLD4 POLDIP2 POLE POLH POLI POLK POLL POLM PPP1CA PRKDC PTEN PTMA RAD18 RAD9A RBBP8 RECQL5 RFC1 RFC2 RFC3 RFC4 RFC5 RFWD3 RPA1 S100A8 SDE2 SEC23IP SIVA1 SLC30A8 SMARCAD1 SPG21 SUB1 SUMO1 TCOF1 TDG TIRAP TMEM218 TPI1 UBB UBC UBE2A UBE2B UBE2D3 UBE2I UBE3D UHRF1 UNG USP4 WDR48 WRN XPA XRCC1 XRCC5 XRCC6 YBX1 ZBTB1
Entrez ID		2237	5111
HPRD ID		02670	01456
Ensembl ID		ENSG00000168496	ENSG00000132646
Uniprot IDs		P39748 Q6FHX6	P12004
PDB IDs		1U7B 1UL1 3Q8K 3Q8L 3Q8M 3UVU 5E0V 5FV7 5K97 5KSE 5UM9 5ZOD 5ZOE 5ZOF 5ZOG 6TNZ 7QO1 8YJH 8YJL 8YJQ 8YJR 8YJS 8YJU 8YJV 8YJW 8YJZ	1AXC 1U76 1U7B 1UL1 1VYJ 1VYM 1W60 2ZVK 2ZVL 2ZVM 3JA9 3P87 3TBL 3VKX 3WGW 4D2G 4RJF 4ZTD 5E0T 5E0U 5E0V 5IY4 5MAV 5MLO 5MLW 5MOM 5YCO 5YD8 6CBI 6EHT 6FCM 6FCN 6GIS 6GWS 6HVO 6K3A 6QC0 6QCG 6S1M 6S1N 6S1O 6TNY 6TNZ 6VVO 7EFA 7KQ0 7KQ1 7M5L 7M5M 7M5N 7NV0 7NV1 7QNZ 7QO1 8B8T 8COB 8E84 8F5Q 8GCJ 8GL9 8GLA 8UI7 8UI8 8UI9 8UII 8UMT 8UMU 8UMV 8UMW 8UMY 8UN0 8YJH 8YJL 8YJQ 8YJR 8YJS 8YJU 8YJV 8YJW 8YJZ 9B8S 9B8T 9CG4 9CHM 9CL7 9CMA 9EOA 9F6D 9F6E 9F6F 9GY0
Enriched GO Terms of Interacting Partners?		Cellular Response To Stress Telomere Maintenance Telomere Organization Nucleic Acid Metabolic Process DNA Damage Response Response To Stress Macromolecule Metabolic Process Cellular Response To Radiation Chromosome, Telomeric Region DNA Damage Checkpoint Signaling Positive Regulation Of Nucleobase-containing Compound Metabolic Process DNA Metabolic Process Chromosome Organization Nucleus DNA Repair Nucleobase-containing Compound Metabolic Process Negative Regulation Of Cell Cycle Intracellular Signal Transduction Nucleoplasm Mitotic DNA Damage Checkpoint Signaling Checkpoint Clamp Complex Response To Radiation Mitotic DNA Integrity Checkpoint Signaling Negative Regulation Of Cell Cycle Process Signal Transduction In Response To DNA Damage Cellular Response To Ionizing Radiation Positive Regulation Of DNA Metabolic Process Double-stranded DNA 3'-5' DNA Exonuclease Activity Regulation Of DNA Metabolic Process Telomere Maintenance Via Semi-conservative Replication Regulation Of Cell Cycle Telomeric D-loop Disassembly Negative Regulation Of Cell Cycle Phase Transition Cyclin-dependent Protein Kinase Holoenzyme Complex Regulation Of DNA Replication Negative Regulation Of Nucleobase-containing Compound Metabolic Process Cellular Response To Oxygen-containing Compound Telomeric Loop Disassembly T-circle Formation Regulation Of Generation Of Precursor Metabolites And Energy Negative Regulation Of Macromolecule Metabolic Process Response To Ionizing Radiation Regulation Of Nucleobase-containing Compound Metabolic Process Positive Regulation Of Macromolecule Metabolic Process DNA Replication 3'-5' Exonuclease Activity Damaged DNA Binding Regulation Of Mitotic Cell Cycle Negative Regulation Of Metabolic Process Forked DNA-dependent Helicase Activity	DNA Damage Response DNA Repair DNA Metabolic Process Cellular Response To Stress Nucleobase-containing Compound Metabolic Process Nucleic Acid Metabolic Process Nucleus Nucleoplasm Response To Stress DNA Replication DNA Recombination Macromolecule Metabolic Process Damaged DNA Binding Double-strand Break Repair DNA Biosynthetic Process Regulation Of DNA Metabolic Process Response To Radiation DNA Binding Postreplication Repair Response To UV Positive Regulation Of DNA Metabolic Process DNA Synthesis Involved In DNA Repair Recombinational Repair Base-excision Repair Chromosome Organization DNA-templated DNA Replication Regulation Of Nucleobase-containing Compound Metabolic Process Negative Regulation Of Nucleobase-containing Compound Metabolic Process Double-strand Break Repair Via Homologous Recombination Mismatch Repair DNA-directed DNA Polymerase Activity Response To Light Stimulus Translesion Synthesis Somatic Hypermutation Of Immunoglobulin Genes Regulation Of DNA Recombination Negative Regulation Of Metabolic Process DNA Clamp Loader Activity Somatic Diversification Of Immune Receptors Via Somatic Mutation Regulation Of Cell Cycle Phase Transition Nucleobase-containing Compound Biosynthetic Process Regulation Of Primary Metabolic Process Mitotic DNA Integrity Checkpoint Signaling Somatic Diversification Of Immunoglobulins Negative Regulation Of Macromolecule Metabolic Process Regulation Of Cell Cycle Process Negative Regulation Of DNA Metabolic Process DNA Polymerase Activity Somatic Cell DNA Recombination Ctf18 RFC-like Complex Glycolytic Process
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