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NXF1 and TRA2A
Number of citations of the paper that reports this interaction (PubMedID
21988832
)
38
Data Source:
BioGRID
(two hybrid)
NXF1
TRA2A
Description
nuclear RNA export factor 1
transformer 2 alpha homolog
Image
No pdb structure
GO Annotations
Cellular Component
Transcription Export Complex
Nucleus
Nuclear Envelope
Nuclear Pore
Nucleoplasm
Cytoplasm
Cytosol
Cytoplasmic Stress Granule
Nuclear Speck
Nuclear RNA Export Factor Complex
Nuclear Inclusion Body
Nucleus
Nucleoplasm
Spliceosomal Complex
Nucleolus
Molecular Function
Nucleic Acid Binding
RNA Binding
MRNA Binding
Protein Binding
Nucleic Acid Binding
RNA Binding
Protein Binding
Biological Process
RNA Export From Nucleus
MRNA Export From Nucleus
Protein Transport
Poly(A)+ MRNA Export From Nucleus
MRNA Transport
MRNA Splicing, Via Spliceosome
MRNA Processing
RNA Splicing
Positive Regulation Of MRNA Splicing, Via Spliceosome
Pathways
Transport of the SLBP independent Mature mRNA
Transport of the SLBP Dependant Mature mRNA
Transport of Mature mRNA Derived from an Intronless Transcript
Transport of Mature mRNA derived from an Intron-Containing Transcript
Drugs
Diseases
GWAS
Waist-to-hip ratio adjusted for BMI (
26426971
)
Waist-to-hip ratio adjusted for BMI x sex x age interaction (4df test) (
26426971
)
Hip circumference adjusted for BMI (
34021172
)
Interacting Genes
138 interacting genes:
ALDOA
ALYREF
APOBEC3C
AUNIP
BACH2
BECN1
BICD2
BIN3
BIRC2
BLMH
BTBD18
C10orf55
C1orf35
CAMK2G
CCDC120
CCDC196
CCDC197
CCDC7
CDYL2
CEBPA
CEP55
CLK2
CLK3
CPSF7
CSNK2A1
CTTN
DDX50
DHX9
DMRTB1
DVL3
ECSIT
EIF4A3
ELAVL4
ESRRA
EXOSC8
FAM9A
FTO
GFAP
GOLGA6L9
GPBP1
GTPBP2
HNRNPUL1
HOMEZ
HOXA1
HSF2BP
IMPA1
IPO11
IPO4
ISY1-RAB43
KATNBL1
KCTD5
KCTD7
KIF24
KRT31
KRT40
LCE3E
LDOC1
LUZP4
MAGOH
MAP1A
MAP1B
MBD3L1
MID2
MRNIP
MTUS2
NKAPD1
NME1
NME4
NUP153
NUP214
NUP62
NUP98
NXF2
NXF3
NXF5
NXT1
NXT2
PEG10
PIH1D2
PPP1R12C
PRKAR1B
PRPH
PRR3
PRRC2B
PURB
QKI
RAD51
RAE1
RALYL
RAN
RANBP2
RBFOX2
RBM15B
RBM22
RBMX
RBPMS
REDIC1
RPRD1A
SGTA
SH2D3A
SH3GLB2
SLAIN1
SNRPA
SNW1
SPATC1L
SRPK2
SRSF1
SRSF3
SRSF4
SRSF7
SRSF8
STRAP
SYCP3
TBC1D14
TCP10L
TEX9
TFIP11
THOC5
TIFA
TNFAIP1
TNPO1
TNPO2
TRA2A
TRA2B
U2AF1
UBQLN1
UBQLN4
UPF3A
VAPA
VIM
VPS28
WEE2-AS1
XIST
ZBED2
ZC3HAV1
ZNF250
ZNF343
ZNF438
82 interacting genes:
C11orf58
CDK2AP2
CDK6
CRABP1
DHX15
FOXP1
LBP
MAGOHB
MIR1-1
MIR1-2
MIR106B
MIR107
MIR122
MIR128-1
MIR128-2
MIR138-1
MIR138-2
MIR140
MIR143
MIR145
MIR155
MIR15A
MIR15B
MIR16-1
MIR16-2
MIR17
MIR18A
MIR199A1
MIR199A2
MIR19A
MIR19B1
MIR200B
MIR200C
MIR205
MIR206
MIR20A
MIR20B
MIR21
MIR214
MIR221
MIR222
MIR25
MIR29B1
MIR29B2
MIR29C
MIR31
MIR34A
MIR34B
MIR34C
MIR363
MIR429
MIR451A
MIR7-1
MIR7-2
MIR7-3
MIR9-1
MIR9-2
MIR92A1
MIR93
MIR98
MIRLET7A1
MIRLET7A2
MIRLET7A3
MIRLET7B
MIRLET7C
MIRLET7D
MIRLET7E
MIRLET7F1
MIRLET7G
MIRLET7I
NUDT21
NXF1
PPP1CC
RNPS1
SELENBP1
SRSF10
TNNT1
U2SURP
UBE4B
XPOT
YTHDC1
YWHAG
Entrez ID
10482
29896
HPRD ID
04035
04096
Ensembl ID
ENSG00000162231
ENSG00000164548
Uniprot IDs
Q59E96
Q9UBU9
Q13595
Q549U1
PDB IDs
1FO1
1FT8
1GO5
1JKG
1JN5
1KOH
1KOO
1OAI
2Z5K
2Z5M
3RW6
3RW7
4WYK
6E5U
Enriched GO Terms of Interacting Partners
?
MRNA Transport
RNA Transport
Nucleobase-containing Compound Transport
RNA Binding
RNA Export From Nucleus
MRNA Binding
Nuclear Transport
Nucleocytoplasmic Transport
Nuclear Export
Regulation Of MRNA Splicing, Via Spliceosome
Regulation Of RNA Splicing
Regulation Of MRNA Processing
MRNA Metabolic Process
RNA Splicing
MRNA Processing
Regulation Of MRNA Metabolic Process
MRNA Export From Nucleus
Nucleic Acid Binding
RNA Processing
Nucleus
Regulation Of Alternative MRNA Splicing, Via Spliceosome
RNA Metabolic Process
RNA Splicing, Via Transesterification Reactions
MRNA Splicing, Via Spliceosome
Intracellular Transport
Nucleic Acid Metabolic Process
Nuclear RNA Export Factor Complex
Nucleoplasm
Positive Regulation Of RNA Splicing
Identical Protein Binding
Import Into Nucleus
Protein Binding
Cellular Localization
Nuclear Localization Sequence Binding
Nuclear Pore
Spliceosomal Complex
Catalytic Step 2 Spliceosome
Protein Import Into Nucleus
Nucleobase-containing Compound Metabolic Process
Nuclear Speck
Positive Regulation Of MRNA Splicing, Via Spliceosome
Establishment Of Localization In Cell
Protein Localization To Nucleus
Exon-exon Junction Complex
Establishment Of Protein Localization To Organelle
Poly(A)+ MRNA Export From Nucleus
Protein Localization To Organelle
Nuclear Envelope
Intracellular Protein Transport
Negative Regulation Of MRNA Metabolic Process
MiRNA-mediated Post-transcriptional Gene Silencing
Regulatory NcRNA-mediated Post-transcriptional Gene Silencing
RISC Complex
Post-transcriptional Gene Silencing
Regulatory NcRNA-mediated Gene Silencing
MRNA Base-pairing Post-transcriptional Repressor Activity
Post-transcriptional Regulation Of Gene Expression
Negative Regulation Of Gene Expression
MRNA 3'-UTR Binding
MiRNA-mediated Gene Silencing By Inhibition Of Translation
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Biosynthetic Process
MiRNA-mediated Gene Silencing By MRNA Destabilization
Negative Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Metabolic Process
Extracellular Vesicle
MRNA Destabilization
Negative Regulation Of Translation
RNA Destabilization
Negative Regulation Of Cytokine Production
Positive Regulation Of MRNA Catabolic Process
Negative Regulation Of Multicellular Organismal Process
Negative Regulation Of Cell Migration
Negative Regulation Of Cell Motility
Negative Regulation Of Angiogenesis
Negative Regulation Of Vasculature Development
Negative Regulation Of Locomotion
Regulation Of Angiogenesis
Positive Regulation Of MRNA Metabolic Process
Regulation Of Gene Expression
Regulation Of Vasculature Development
Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Vascular Endothelial Growth Factor Production
Regulation Of MRNA Metabolic Process
Regulation Of MRNA Stability
Regulation Of RNA Stability
Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Developmental Process
Regulation Of Cytokine Production
Regulation Of Translation
Negative Regulation Of Blood Vessel Endothelial Cell Migration
Negative Regulation Of Endothelial Cell Migration
Regulation Of Blood Vessel Endothelial Cell Migration
Regulation Of Cell Motility
Extracellular Space
Regulation Of Metabolic Process
Regulation Of Cell Migration
Regulation Of Locomotion
Negative Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
Regulation Of Endothelial Cell Migration
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Tagcloud (Intersection)
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