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NXF1 and RAD51
Number of citations of the paper that reports this interaction (PubMedID
21988832
)
38
Data Source:
BioGRID
(two hybrid)
NXF1
RAD51
Description
nuclear RNA export factor 1
RAD51 recombinase
Image
GO Annotations
Cellular Component
Transcription Export Complex
Nucleus
Nuclear Envelope
Nuclear Pore
Nucleoplasm
Cytoplasm
Cytosol
Cytoplasmic Stress Granule
Nuclear Speck
Nuclear RNA Export Factor Complex
Nuclear Inclusion Body
Nuclear Ubiquitin Ligase Complex
Nuclear Chromosome
Chromosome, Telomeric Region
Chromatin
Condensed Chromosome
Condensed Nuclear Chromosome
Lateral Element
Male Germ Cell Nucleus
Nucleus
Nucleoplasm
Chromosome
Nucleolus
Cytoplasm
Mitochondrion
Mitochondrial Matrix
Centrosome
Cytosol
Cytoskeleton
PML Body
Protein-containing Complex
Site Of Double-strand Break
Perinuclear Region Of Cytoplasm
Presynaptic Intermediate Filament Cytoskeleton
Molecular Function
Nucleic Acid Binding
RNA Binding
MRNA Binding
Protein Binding
DNA Strand Exchange Activity
Nucleotide Binding
DNA Binding
Chromatin Binding
Double-stranded DNA Binding
Single-stranded DNA Binding
Protein Binding
ATP Binding
ATP-dependent Activity, Acting On DNA
Single-stranded DNA Helicase Activity
Enzyme Binding
Identical Protein Binding
DNA Polymerase Binding
ATP-dependent DNA Damage Sensor Activity
Biological Process
RNA Export From Nucleus
MRNA Export From Nucleus
Protein Transport
Poly(A)+ MRNA Export From Nucleus
MRNA Transport
Telomere Maintenance Via Recombination
Double-strand Break Repair Via Homologous Recombination
DNA Recombinase Assembly
DNA Metabolic Process
DNA Repair
DNA Recombination
Mitotic Recombination
DNA Damage Response
Meiosis I
Reciprocal Meiotic Recombination
Response To Xenobiotic Stimulus
Response To Toxic Substance
Response To X-ray
Regulation Of Double-strand Break Repair Via Homologous Recombination
Telomere Maintenance Via Telomere Lengthening
Replication Fork Processing
Telomere Organization
Interstrand Cross-link Repair
DNA Strand Invasion
Meiotic Cell Cycle
Chromosome Organization Involved In Meiotic Cell Cycle
Cellular Response To Alkaloid
Cellular Response To Ionizing Radiation
Cellular Response To Gamma Radiation
Cellular Response To Hydroxyurea
Cellular Response To Cisplatin
Cellular Response To Camptothecin
Response To Glucoside
Replication-born Double-strand Break Repair Via Sister Chromatid Exchange
Mitotic Recombination-dependent Replication Fork Processing
Double-strand Break Repair Involved In Meiotic Recombination
Regulation Of DNA Damage Checkpoint
Pathways
Transport of the SLBP independent Mature mRNA
Transport of the SLBP Dependant Mature mRNA
Transport of Mature mRNA Derived from an Intronless Transcript
Transport of Mature mRNA derived from an Intron-Containing Transcript
HDR through Single Strand Annealing (SSA)
HDR through Homologous Recombination (HRR)
Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)
Resolution of D-loop Structures through Holliday Junction Intermediates
Homologous DNA Pairing and Strand Exchange
Presynaptic phase of homologous DNA pairing and strand exchange
Transcriptional Regulation by E2F6
Meiotic recombination
Meiotic recombination
Defective homologous recombination repair (HRR) due to BRCA1 loss of function
Defective HDR through Homologous Recombination Repair (HRR) due to PALB2 loss of BRCA1 binding function
Defective HDR through Homologous Recombination Repair (HRR) due to PALB2 loss of BRCA2/RAD51/RAD51C binding function
Impaired BRCA2 binding to RAD51
Impaired BRCA2 binding to PALB2
Drugs
Phosphoaminophosphonic Acid-Adenylate Ester
Amuvatinib
Diseases
GWAS
Waist-to-hip ratio adjusted for BMI (
26426971
)
Waist-to-hip ratio adjusted for BMI x sex x age interaction (4df test) (
26426971
)
Anxiety and stress-related disorders (
31116379
)
Hip circumference adjusted for BMI (
34021172
)
Malaria (
31844061
)
Mean spheric corpuscular volume (
32888494
)
Refractive error (
32231278
)
Interacting Genes
138 interacting genes:
ALDOA
ALYREF
APOBEC3C
AUNIP
BACH2
BECN1
BICD2
BIN3
BIRC2
BLMH
BTBD18
C10orf55
C1orf35
CAMK2G
CCDC120
CCDC196
CCDC197
CCDC7
CDYL2
CEBPA
CEP55
CLK2
CLK3
CPSF7
CSNK2A1
CTTN
DDX50
DHX9
DMRTB1
DVL3
ECSIT
EIF4A3
ELAVL4
ESRRA
EXOSC8
FAM9A
FTO
GFAP
GOLGA6L9
GPBP1
GTPBP2
HNRNPUL1
HOMEZ
HOXA1
HSF2BP
IMPA1
IPO11
IPO4
ISY1-RAB43
KATNBL1
KCTD5
KCTD7
KIF24
KRT31
KRT40
LCE3E
LDOC1
LUZP4
MAGOH
MAP1A
MAP1B
MBD3L1
MID2
MRNIP
MTUS2
NKAPD1
NME1
NME4
NUP153
NUP214
NUP62
NUP98
NXF2
NXF3
NXF5
NXT1
NXT2
PEG10
PIH1D2
PPP1R12C
PRKAR1B
PRPH
PRR3
PRRC2B
PURB
QKI
RAD51
RAE1
RALYL
RAN
RANBP2
RBFOX2
RBM15B
RBM22
RBMX
RBPMS
REDIC1
RPRD1A
SGTA
SH2D3A
SH3GLB2
SLAIN1
SNRPA
SNW1
SPATC1L
SRPK2
SRSF1
SRSF3
SRSF4
SRSF7
SRSF8
STRAP
SYCP3
TBC1D14
TCP10L
TEX9
TFIP11
THOC5
TIFA
TNFAIP1
TNPO1
TNPO2
TRA2A
TRA2B
U2AF1
UBQLN1
UBQLN4
UPF3A
VAPA
VIM
VPS28
WEE2-AS1
XIST
ZBED2
ZC3HAV1
ZNF250
ZNF343
ZNF438
99 interacting genes:
ABL1
AGO2
ATM
ATRX
BARD1
BCCIP
BCR
BLM
BRCA1
BRCA2
CASP3
CASP7
CASP8AP2
CCND1
CDH13
CHD3
CHEK1
CRYAA
CSNK2A1
CSNK2B
CST6
CTCF
DDB2
DMC1
DNAJA3
ENAH
EP400
ERCC2
ERCC5
EVL
FANCD2
FANCI
FBH1
FBXO5
FIRRM
GMEB1
HID1
HNRNPC
HSP90AA1
IL24
IRS1
ITIH5
MAPK8IP3
MCPH1
MDC1
MMS22L
MSH4
NBN
NCL
NELFB
NXF1
PARPBP
PCSK1N
PDS5B
PFN1
PIAS1
PLK1
POLA1
RAD18
RAD51AP1
RAD51AP2
RAD51C
RAD52
RAD54B
RAD54L
RAD54L2
RECQL5
RELA
RFWD3
RNF20
RPA1
RPA2
RPA3
SEM1
SFR1
SIRT2
ST14
SUMO1
SUMO2
SWSAP1
TDG
TFF1
TOPORS
TP53
TP53BP1
UBE2I
UCHL3
UGDH
UHRF2
UMPS
USP10
VASP
VIM
WDR48
WRN
XPO1
XRCC2
XRCC3
ZDHHC17
Entrez ID
10482
5888
HPRD ID
04035
01557
Ensembl ID
ENSG00000162231
ENSG00000051180
Uniprot IDs
Q59E96
Q9UBU9
Q06609
PDB IDs
1FO1
1FT8
1GO5
1JKG
1JN5
1KOH
1KOO
1OAI
2Z5K
2Z5M
3RW6
3RW7
4WYK
6E5U
1B22
1N0W
5H1B
5H1C
5JZC
5NP7
5NWL
7C9A
7EJC
7EJE
8BQ2
8BR2
8BSC
8GYK
8JND
8JNE
8JNF
8PBC
8PBD
8R64
8RCD
8RCF
8XBT
8XBU
8XBV
8XBW
8XBX
8XBY
Enriched GO Terms of Interacting Partners
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MRNA Transport
RNA Transport
Nucleobase-containing Compound Transport
RNA Binding
RNA Export From Nucleus
MRNA Binding
Nuclear Transport
Nucleocytoplasmic Transport
Nuclear Export
Regulation Of MRNA Splicing, Via Spliceosome
Regulation Of RNA Splicing
Regulation Of MRNA Processing
MRNA Metabolic Process
RNA Splicing
MRNA Processing
Regulation Of MRNA Metabolic Process
MRNA Export From Nucleus
Nucleic Acid Binding
RNA Processing
Nucleus
Regulation Of Alternative MRNA Splicing, Via Spliceosome
RNA Metabolic Process
RNA Splicing, Via Transesterification Reactions
MRNA Splicing, Via Spliceosome
Intracellular Transport
Nucleic Acid Metabolic Process
Nuclear RNA Export Factor Complex
Nucleoplasm
Positive Regulation Of RNA Splicing
Identical Protein Binding
Import Into Nucleus
Protein Binding
Cellular Localization
Nuclear Localization Sequence Binding
Nuclear Pore
Spliceosomal Complex
Catalytic Step 2 Spliceosome
Protein Import Into Nucleus
Nucleobase-containing Compound Metabolic Process
Nuclear Speck
Positive Regulation Of MRNA Splicing, Via Spliceosome
Establishment Of Localization In Cell
Protein Localization To Nucleus
Exon-exon Junction Complex
Establishment Of Protein Localization To Organelle
Poly(A)+ MRNA Export From Nucleus
Protein Localization To Organelle
Nuclear Envelope
Intracellular Protein Transport
Negative Regulation Of MRNA Metabolic Process
DNA Repair
DNA Damage Response
DNA Metabolic Process
Double-strand Break Repair Via Homologous Recombination
Double-strand Break Repair
Recombinational Repair
Cellular Response To Stress
DNA Recombination
Nucleoplasm
Nucleic Acid Metabolic Process
Nucleobase-containing Compound Metabolic Process
Response To Stress
Macromolecule Metabolic Process
Nucleus
PML Body
Signal Transduction In Response To DNA Damage
Regulation Of Double-strand Break Repair Via Homologous Recombination
Regulation Of DNA Metabolic Process
Regulation Of DNA Recombination
Replication Fork
Regulation Of Cell Cycle
Single-stranded DNA Binding
Response To Ionizing Radiation
DNA Binding
DNA Damage Checkpoint Signaling
Response To Radiation
Regulation Of DNA Repair
Mitotic DNA Damage Checkpoint Signaling
Regulation Of Cell Cycle Process
Regulation Of Double-strand Break Repair
Chromosome Organization
Mitotic DNA Integrity Checkpoint Signaling
Chromosome
Regulation Of Cell Cycle Phase Transition
Regulation Of Mitotic Cell Cycle
Damaged DNA Binding
Negative Regulation Of Cell Cycle
Negative Regulation Of Cell Cycle Phase Transition
Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Cellular Response To Stress
Negative Regulation Of Cell Cycle Process
Site Of Double-strand Break
Homologous Recombination
Negative Regulation Of DNA Metabolic Process
Negative Regulation Of Mitotic Cell Cycle
Chromosome, Telomeric Region
Response To X-ray
Negative Regulation Of Double-strand Break Repair Via Homologous Recombination
Regulation Of Primary Metabolic Process
Negative Regulation Of DNA Recombination
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Tagcloud (Difference)
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Tagcloud (Intersection)
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