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NXF1 and APOBEC3C
Number of citations of the paper that reports this interaction (PubMedID
34133714
)
84
Data Source:
BioGRID
(two hybrid)
NXF1
APOBEC3C
Description
nuclear RNA export factor 1
apolipoprotein B mRNA editing enzyme catalytic subunit 3C
Image
GO Annotations
Cellular Component
Transcription Export Complex
Nucleus
Nuclear Envelope
Nuclear Pore
Nucleoplasm
Cytoplasm
Cytosol
Cytoplasmic Stress Granule
Nuclear Speck
Nuclear RNA Export Factor Complex
Nuclear Inclusion Body
P-body
Nucleus
Cytoplasm
Molecular Function
Nucleic Acid Binding
RNA Binding
MRNA Binding
Protein Binding
RNA Binding
Catalytic Activity
Cytidine Deaminase Activity
Protein Binding
Zinc Ion Binding
Hydrolase Activity
Metal Ion Binding
Biological Process
RNA Export From Nucleus
MRNA Export From Nucleus
Protein Transport
Poly(A)+ MRNA Export From Nucleus
MRNA Transport
Immune System Process
Transposable Element Silencing
Negative Regulation Of Macromolecule Biosynthetic Process
Cytidine To Uridine Editing
Positive Regulation Of Gene Expression Via Chromosomal CpG Island Demethylation
Clearance Of Foreign Intracellular DNA
Negative Regulation Of Viral Genome Replication
Innate Immune Response
Negative Regulation Of Single Stranded Viral RNA Replication Via Double Stranded DNA Intermediate
Defense Response To Virus
DNA Cytosine Deamination
Defense Response To Symbiont
Pathways
Transport of the SLBP independent Mature mRNA
Transport of the SLBP Dependant Mature mRNA
Transport of Mature mRNA Derived from an Intronless Transcript
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Editing: C to U Conversion
Formation of the Editosome
Drugs
Diseases
GWAS
Waist-to-hip ratio adjusted for BMI (
26426971
)
Waist-to-hip ratio adjusted for BMI x sex x age interaction (4df test) (
26426971
)
Asthma exacerbations in inhaled corticosteroid treatment (
30697902
)
Response to methotrexate in juvenile idiopathic arthritis (
24709693
)
Interacting Genes
138 interacting genes:
ALDOA
ALYREF
APOBEC3C
AUNIP
BACH2
BECN1
BICD2
BIN3
BIRC2
BLMH
BTBD18
C10orf55
C1orf35
CAMK2G
CCDC120
CCDC196
CCDC197
CCDC7
CDYL2
CEBPA
CEP55
CLK2
CLK3
CPSF7
CSNK2A1
CTTN
DDX50
DHX9
DMRTB1
DVL3
ECSIT
EIF4A3
ELAVL4
ESRRA
EXOSC8
FAM9A
FTO
GFAP
GOLGA6L9
GPBP1
GTPBP2
HNRNPUL1
HOMEZ
HOXA1
HSF2BP
IMPA1
IPO11
IPO4
ISY1-RAB43
KATNBL1
KCTD5
KCTD7
KIF24
KRT31
KRT40
LCE3E
LDOC1
LUZP4
MAGOH
MAP1A
MAP1B
MBD3L1
MID2
MRNIP
MTUS2
NKAPD1
NME1
NME4
NUP153
NUP214
NUP62
NUP98
NXF2
NXF3
NXF5
NXT1
NXT2
PEG10
PIH1D2
PPP1R12C
PRKAR1B
PRPH
PRR3
PRRC2B
PURB
QKI
RAD51
RAE1
RALYL
RAN
RANBP2
RBFOX2
RBM15B
RBM22
RBMX
RBPMS
REDIC1
RPRD1A
SGTA
SH2D3A
SH3GLB2
SLAIN1
SNRPA
SNW1
SPATC1L
SRPK2
SRSF1
SRSF3
SRSF4
SRSF7
SRSF8
STRAP
SYCP3
TBC1D14
TCP10L
TEX9
TFIP11
THOC5
TIFA
TNFAIP1
TNPO1
TNPO2
TRA2A
TRA2B
U2AF1
UBQLN1
UBQLN4
UPF3A
VAPA
VIM
VPS28
WEE2-AS1
XIST
ZBED2
ZC3HAV1
ZNF250
ZNF343
ZNF438
30 interacting genes:
ARIH2
CHTOP
CUL5
FBXO7
HHEX
HNRNPK
MYO10
NXF1
PCBP2
PCBP3
PRPF31
PRR3
RBM7
RBMX
RBMY1A1
RBMY1F
RBMY1J
SF1
SHBG
SNRPA
SNW1
SRPK2
TRAF3
TRIB3
UBC
UNKL
ZNF250
ZNF408
ZNF48
ZNF581
Entrez ID
10482
27350
HPRD ID
04035
09671
Ensembl ID
ENSG00000162231
ENSG00000244509
Uniprot IDs
Q59E96
Q9UBU9
Q9NRW3
PDB IDs
1FO1
1FT8
1GO5
1JKG
1JN5
1KOH
1KOO
1OAI
2Z5K
2Z5M
3RW6
3RW7
4WYK
6E5U
3VM8
3VOW
Enriched GO Terms of Interacting Partners
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MRNA Transport
RNA Transport
Nucleobase-containing Compound Transport
RNA Binding
RNA Export From Nucleus
MRNA Binding
Nuclear Transport
Nucleocytoplasmic Transport
Nuclear Export
Regulation Of MRNA Splicing, Via Spliceosome
Regulation Of RNA Splicing
Regulation Of MRNA Processing
MRNA Metabolic Process
RNA Splicing
MRNA Processing
Regulation Of MRNA Metabolic Process
MRNA Export From Nucleus
Nucleic Acid Binding
RNA Processing
Nucleus
Regulation Of Alternative MRNA Splicing, Via Spliceosome
RNA Metabolic Process
RNA Splicing, Via Transesterification Reactions
MRNA Splicing, Via Spliceosome
Intracellular Transport
Nucleic Acid Metabolic Process
Nuclear RNA Export Factor Complex
Nucleoplasm
Positive Regulation Of RNA Splicing
Identical Protein Binding
Import Into Nucleus
Protein Binding
Cellular Localization
Nuclear Localization Sequence Binding
Nuclear Pore
Spliceosomal Complex
Catalytic Step 2 Spliceosome
Protein Import Into Nucleus
Nucleobase-containing Compound Metabolic Process
Nuclear Speck
Positive Regulation Of MRNA Splicing, Via Spliceosome
Establishment Of Localization In Cell
Protein Localization To Nucleus
Exon-exon Junction Complex
Establishment Of Protein Localization To Organelle
Poly(A)+ MRNA Export From Nucleus
Protein Localization To Organelle
Nuclear Envelope
Intracellular Protein Transport
Negative Regulation Of MRNA Metabolic Process
Spliceosomal Complex
MRNA Metabolic Process
Regulation Of MRNA Splicing, Via Spliceosome
Regulation Of MRNA Processing
RNA Binding
RNA Splicing
Regulation Of RNA Splicing
Positive Regulation Of MRNA Splicing, Via Spliceosome
Nucleic Acid Binding
MRNA Processing
Nucleus
Positive Regulation Of RNA Splicing
RNA Metabolic Process
Regulation Of MRNA Metabolic Process
MRNA Binding
MRNA Splicing, Via Spliceosome
RNA Processing
RNA Splicing, Via Transesterification Reactions
Nucleic Acid Metabolic Process
Regulation Of RNA Metabolic Process
Positive Regulation Of MRNA Metabolic Process
Identical Protein Binding
Nucleoplasm
Ubiquitin Protein Ligase Binding
Regulation Of Nucleobase-containing Compound Metabolic Process
Macromolecule Metabolic Process
Ribonucleoprotein Complex
Viral RNA Genome Replication
Nucleobase-containing Compound Metabolic Process
Transcription Export Complex
Regulation Of Primary Metabolic Process
Regulation Of Alternative MRNA Splicing, Via Spliceosome
Cul5-RING Ubiquitin Ligase Complex
Negative Regulation Of CGAS/STING Signaling Pathway
Protein Binding
Regulation Of Gene Expression
Catalytic Step 2 Spliceosome
Viral Genome Replication
Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of MRNA Splicing, Via Spliceosome
Protein K48-linked Ubiquitination
Nuclear Speck
Ubiquitin Ligase Complex
Negative Regulation Of RNA Splicing
Regulation Of Macromolecule Metabolic Process
Regulation Of Metabolic Process
CGAS/STING Signaling Pathway
Ubiquitin-protein Transferase Activity
Nucleolus
14-3-3 Protein Binding
Tagcloud
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Tagcloud (Difference)
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Tagcloud (Intersection)
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