TRAF4 and RBPMS

Number of citations of the paper that reports this interaction (PubMedID 27107012)
72

Data Source:
BioGRID (two hybrid)

		TRAF4	RBPMS
Description		TNF receptor associated factor 4	RNA binding protein, mRNA processing factor
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GO Annotations	Cellular Component	Fibrillar Center Nucleus Nucleoplasm Cytoplasm Cytosol Cytoskeleton Plasma Membrane Bicellular Tight Junction Membrane Perinuclear Region Of Cytoplasm Anchoring Junction	P-body Nucleus Nucleoplasm Cytoplasm Cytosol Cytoplasmic Stress Granule
	Molecular Function	Tumor Necrosis Factor Receptor Binding Protein Binding Zinc Ion Binding Transferase Activity Enzyme Binding Protein Kinase Binding Ubiquitin Protein Ligase Binding Thioesterase Binding Signaling Adaptor Activity Identical Protein Binding Metal Ion Binding WW Domain Binding	Nucleic Acid Binding Transcription Coactivator Activity RNA Binding MRNA Binding MRNA 3'-UTR Binding Protein Binding Pre-mRNA Binding Identical Protein Binding Protein Homodimerization Activity Molecular Adaptor Activity Pre-mRNA Intronic Binding MRNA CDS Binding
	Biological Process	Immune System Process Apoptotic Process Signal Transduction Cell Surface Receptor Signaling Pathway Respiratory Gaseous Exchange By Respiratory System Respiratory Tube Development Regulation Of Apoptotic Process Regulation Of Canonical NF-kappaB Signal Transduction Proteasome-mediated Ubiquitin-dependent Protein Catabolic Process Innate Immune Response Positive Regulation Of Protein Kinase Activity Positive Regulation Of JNK Cascade	Regulation Of Alternative MRNA Splicing, Via Spliceosome RNA Processing Response To Oxidative Stress Positive Regulation Of DNA-templated Transcription SMAD Protein Signal Transduction Protein-containing Complex Assembly
Pathways
Drugs
Diseases
GWAS			Blood urea nitrogen levels ( 31152163) Breast size ( 27182965) Eosinophil count ( 32888494) Granulocyte count ( 27863252) Heart rate variability traits ( 22174390) Lymphocyte percentage of white cells ( 27863252 32888494) Mean corpuscular hemoglobin ( 27863252 32888494 28017375) Mean corpuscular volume ( 29403010 32888494 28017375 27863252) Mean reticulocyte volume ( 32888494) Mean spheric corpuscular volume ( 32888494) Monocyte count ( 32888494) Mosaic loss of chromosome Y (Y chromosome dosage) ( 28346444 31624269) Myeloid white cell count ( 27863252) Neutrophil count ( 27863252 32888494) Neutrophil percentage of white cells ( 32888494) Platelet count ( 32888494 27863252) Plateletcrit ( 32888494 27863252) PR interval ( 32439900) Serum alkaline phosphatase levels ( 33547301) Sum basophil neutrophil counts ( 27863252) Sum neutrophil eosinophil counts ( 27863252) Systolic blood pressure ( 30224653) Total grey matter volume ( 31530798) White blood cell count ( 32888494)
Interacting Genes		137 interacting genes: ABI3 ACTMAP ALKBH4 ANXA1 AR ATOSB ATOX1 BACH2 BAHD1 BANP BCKDK BCL6B BEGAIN BEX3 BYSL CALCOCO2 CAV1 CBL CBLC CCHCR1 CENPE CEP85 CHEK1 CHUK DISC1 DNM2 DPEP2NB DTX3 EXOC7 EYA2 EZHIP FAM90A1 FAT1 FBXL18 FRS3 FTH1 GOLGA2 GOLGA6A GOLGA6L9 GORASP1 GORASP2 GPRASP1 HEY2 HGS HMG20A HOMEZ HOXA1 HOXB5 IRAK1 IRS1 ISYNA1 KANK2 KANSL1 KDM1A KRT31 KRT36 LENG8 LNX1 LTBR MAGEC2 MAGED1 MAP3K4 MRPL28 NCF1 NGFR NHERF2 NOS1AP NPAS2 NTRK1 NUDT16L1 OGT PCSK5 PDE4DIP PHLDA1 PICK1 PKD1P1 PLAGL2 PLEKHA7 PLSCR1 POLR2J POLR2J3 PSMC3 QARS1 RAD54L2 RBPMS REXO1L6P RNF114 RNF144B RNF4 RPS6KB1 SF3B4 SIGLEC7 SMURF1 SMURF2 SNRPB SORBS2 SPDL1 SUMO1 TARBP2 TAX1BP1 TBC1D7 TBC1D8 TFAP4 TGFB1I1 TICAM1 TNFRSF4 TP53BP2 TRAF6 TRIM27 TRIM37 TSGA10IP TYK2 UBC UBE2D1 UBE2I UBL4A UBL4B USP7 VPS52 WBP11 WWP1 WWP2 ZBTB16 ZBTB26 ZC3H12C ZMYM5 ZNF177 ZNF275 ZNF3 ZNF512B ZNF559-ZNF177 ZNF581 ZNF620 ZNF688 ZNF784 ZNF835 ZRANB1	311 interacting genes: ABCF3 ACTMAP ADAM15 ALG13 AMMECR1 ANAPC11 ANKHD1 ANKMY1 APLN ARHGAP9 ARHGEF39 ARID5A ATN1 ATP6V0D1 ATP6V0E2 ATXN1 ATXN7L2 BAG4 BANP BBS2 BCAS2 BCL6B BHLHE40 BOLL C10orf55 C11orf87 C1orf94 C22orf39 CAMK2A CAMK2B CCDC120 CCER1 CCL14 CCNG1 CCNK CDC23 CDC42EP1 CDK6 CEP55 CHCHD7 CIMIP1 CIMIP2B CLPP CNNM3 COL8A1 CPEB2 CPSF7 CRBN CREB5 CRX CRYBA1 CSN3 CSNK1G2-AS1 CYBA DAZAP2 DCAF8 DCDC2B DCTN5 DDX28 DMRT3 DMRTB1 DNTTIP2 DOK3 DOK6 DPYSL4 DTX2 DVL2 DYNC1I1 EAF2 EFEMP2 ENKD1 EWSR1 EXOSC1 EXOSC7 EYA2 FAM120A FAM124B FAM168A FASTK FBF1 FBXL18 FNDC11 FOXC2 FOXP3 FOXS1 FRG1 FXR2 GATA1 GATA2 GATAD2B GCM2 GLIS2 GLYCTK GPATCH2L GPS2 GRAP GRAP2 GSE1 HCK HEY2 HEYL HIVEP1 HNRNPLL HOXA1 HOXA9 HOXB9 HOXC8 HSFY1 IGF2 ILF3 INCA1 INIP IP6K2 KAT5 KCTD9 KIF1A KIR2DL4 KLHDC7B KPNA2 KRAS KRTAP11-1 KRTAP12-1 KRTAP12-2 KRTAP12-4 KRTAP13-1 KRTAP13-3 KRTAP15-1 KRTAP19-1 KRTAP19-3 KRTAP19-5 KRTAP19-7 KRTAP23-1 KRTAP26-1 KRTAP3-1 KRTAP8-1 LARP4B LASP1 LGALS9C LINC00482 LINC00588 LINC00908 LINC01547 LINC01588 LMO4 LONRF1 LRRC41 LZTS2 MAGED1 MAZ MBNL1 MBNL2 MCM5 MCM7 MEIS2 MGAT5B MKRN3 MLLT10 MORN3 MRPL10 MRPL20-AS1 MRPL44 MSI2 MSX1 MVP MYH7B MYO1C MYOZ2 NAB2 NANOG NAPRT NEDD9 NEU4 NIP7 NKX2-5 NR1D2 NTAQ1 NXF1 NYNRIN OTX1 PATL1 PATZ1 PCBP2 PDLIM4 PER1 PGLS PHF1 PICALM PIH1D1 PIN1 PITX1 PITX2 PKP2 PLAC8 PLSCR4 POGZ POLDIP3 POLR3GL POM121 POU4F2 POU6F2 PPP1R16B PRKAA1 PRKAA2 PRKAB2 PRKRA PRPF6 PRR20A PRR20B PRR20C PRR20D PRR20E PRR35 PRRC2B PSG11 PSMF1 PTBP3 QKI R3HDM2 RABL6 RAD54L2 RAMAC RBFOX1 RBFOX2 RBM22 RBM24 RBM42 RBM46 RBM7 RBPMS2 RDH12 RDX RHOBTB3 RHOXF2 RIPPLY1 RNF20 ROR2 RPP25 RPS27A RTP5 RUSC1 SBF2 SEMA4G SERF2 SF1 SFI1 SH3RF2 SIRPB1 SLAIN1 SLC25A48 SLIRP SMAD3 SMAP1 SMARCC2 SMUG1 SNHG29 SNRPB SNRPC SNRPG SNRPN SNW1 SPATA46 SPATA8 SPG7 SPMIP6 SPMIP9 STRBP TBX6 TCEA2 TCF7L2 TEKT5 TENT2 TFG TIE1 TINAGL1 TLE5 TMEM277P TMEM42 TMSB4X TNS2 TOLLIP TOR1AIP2 TRAF4 TRIP13 TSC1 TSG101 TSGA10IP TSPYL6 TTLL10 TUSC2 TXNL4A UBAP2 UNKL VENTX VEZF1 VGLL3 VHL VHLL VPS37C WBP4 WDR54 WDR90 YPEL3 YTHDF1 ZBTB32 ZC3H10 ZIC1 ZMAT5 ZNF34 ZNF385C ZNF488 ZNF581
Entrez ID		9618	11030
HPRD ID		03915	11870
Ensembl ID		ENSG00000076604	ENSG00000157110
Uniprot IDs		Q9BUZ4	B4E3T4 Q93062
PDB IDs		2EOD 2YUC 3ZJB 4K8U 4M4E 5YC1	5CYJ 5DET
Enriched GO Terms of Interacting Partners?		Protein Binding Nucleus Regulation Of DNA-templated Transcription Regulation Of Primary Metabolic Process Regulation Of RNA Biosynthetic Process Regulation Of Nucleobase-containing Compound Metabolic Process Protein Modification Process Regulation Of Metabolic Process Regulation Of RNA Metabolic Process Regulation Of Macromolecule Metabolic Process Cytosol Protein Modification By Small Protein Conjugation Negative Regulation Of Transcription By RNA Polymerase II Regulation Of Macromolecule Biosynthetic Process Negative Regulation Of DNA-templated Transcription Negative Regulation Of RNA Biosynthetic Process Protein Ubiquitination Regulation Of Transcription By RNA Polymerase II Ubiquitin-protein Transferase Activity Regulation Of Gene Expression Ubiquitin Protein Ligase Activity Post-translational Protein Modification Negative Regulation Of RNA Metabolic Process Modification-dependent Protein Catabolic Process Toll-like Receptor 4 Signaling Pathway Negative Regulation Of Nucleobase-containing Compound Metabolic Process Cell Surface Toll-like Receptor Signaling Pathway Identical Protein Binding Ubiquitin-dependent Protein Catabolic Process Protein Metabolic Process Cell Surface Pattern Recognition Receptor Signaling Pathway Positive Regulation Of Macromolecule Metabolic Process Proteolysis Involved In Protein Catabolic Process Cytoplasm Positive Regulation Of Metabolic Process Regulation Of Protein Modification Process Innate Immune Response Activating Cell Surface Receptor Signaling Pathway Positive Regulation Of Protein Ubiquitination Regulation Of Post-translational Protein Modification Regulation Of Protein Ubiquitination PML Body Regulation Of Programmed Cell Death Negative Regulation Of Macromolecule Biosynthetic Process Signaling Adaptor Activity Zinc Ion Binding Proteolysis Positive Regulation Of Macromolecule Biosynthetic Process Negative Regulation Of Biosynthetic Process Macromolecule Catabolic Process Positive Regulation Of Protein Metabolic Process	Nucleus Protein Binding RNA Binding Nucleic Acid Binding Negative Regulation Of RNA Metabolic Process Positive Regulation Of Macromolecule Biosynthetic Process Positive Regulation Of DNA-templated Transcription Positive Regulation Of RNA Biosynthetic Process Regulation Of RNA Metabolic Process Nucleoplasm Positive Regulation Of RNA Metabolic Process Regulation Of Nucleobase-containing Compound Metabolic Process Positive Regulation Of Biosynthetic Process Positive Regulation Of Nucleobase-containing Compound Metabolic Process Sequence-specific Double-stranded DNA Binding Intermediate Filament MRNA Processing Negative Regulation Of Nucleobase-containing Compound Metabolic Process Negative Regulation Of Transcription By RNA Polymerase II Regulation Of Gene Expression MRNA Binding Regulation Of Primary Metabolic Process RNA Processing Regulation Of Macromolecule Metabolic Process Regulation Of Macromolecule Biosynthetic Process Negative Regulation Of Macromolecule Metabolic Process Negative Regulation Of DNA-templated Transcription Positive Regulation Of Transcription By RNA Polymerase II Negative Regulation Of RNA Biosynthetic Process RNA Splicing Negative Regulation Of Macromolecule Biosynthetic Process Positive Regulation Of Macromolecule Metabolic Process Regulation Of RNA Splicing Regulation Of DNA-templated Transcription Regulation Of Transcription By RNA Polymerase II Regulation Of RNA Biosynthetic Process MRNA Metabolic Process Negative Regulation Of Biosynthetic Process RNA Metabolic Process MRNA Splicing, Via Spliceosome Chromatin Regulation Of Metabolic Process Spliceosomal Complex Negative Regulation Of Metabolic Process Cytoplasmic Stress Granule RNA Splicing, Via Transesterification Reactions RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding Sequence-specific DNA Binding DNA-binding Transcription Factor Activity, RNA Polymerase II-specific Positive Regulation Of Metabolic Process
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