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XRCC1 and PNKP
Number of citations of the paper that reports this interaction (PubMedID
11163244
)
0
Data Source:
HPRD
(two hybrid, in vitro)
XRCC1
PNKP
Description
X-ray repair cross complementing 1
polynucleotide kinase 3'-phosphatase
Image
GO Annotations
Cellular Component
Chromosome, Telomeric Region
Chromatin
Nucleus
Nucleoplasm
Chromosome
Nucleolus
ERCC4-ERCC1 Complex
Site Of DNA Damage
Nucleus
Nucleoplasm
Chromosome
Nucleolus
Membrane
Site Of Double-strand Break
Molecular Function
Damaged DNA Binding
Protein Binding
Enzyme Binding
Oxidized DNA Binding
Poly-ADP-D-ribose Binding
ADP-D-ribose Modification-dependent Protein Binding
3' Overhang Single-stranded DNA Endodeoxyribonuclease Activity
Nucleotide Binding
Damaged DNA Binding
Double-stranded DNA Binding
Catalytic Activity
Endonuclease Activity
Protein Binding
ATP Binding
Kinase Activity
Transferase Activity
Hydrolase Activity
Purine Nucleotide Binding
Polynucleotide 3'-phosphatase Activity
ATP-dependent Polydeoxyribonucleotide 5'-hydroxyl-kinase Activity
ATP-dependent Polynucleotide 5'-hydroxyl-kinase Activity
Biological Process
Single Strand Break Repair
DNA Repair
Base-excision Repair
Double-strand Break Repair
Double-strand Break Repair Via Nonhomologous End Joining
DNA Damage Response
Negative Regulation Of Protein ADP-ribosylation
Hippocampus Development
Response To Hydroperoxide
Telomeric DNA-containing Double Minutes Formation
Regulation Of Base-excision Repair
Negative Regulation Of Protection From Non-homologous End Joining At Telomere
DNA-templated DNA Replication
DNA Repair
Base-excision Repair, Gap-filling
Nucleotide-excision Repair
Double-strand Break Repair Via Nonhomologous End Joining
DNA Damage Response
Response To Oxidative Stress
Response To Radiation
Positive Regulation Of Telomere Maintenance
Positive Regulation Of Double-strand Break Repair Via Nonhomologous End Joining
Pathways
Resolution of AP sites via the single-nucleotide replacement pathway
APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway
HDR through MMEJ (alt-NHEJ)
Gap-filling DNA repair synthesis and ligation in GG-NER
Gap-filling DNA repair synthesis and ligation in TC-NER
APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway
Drugs
Diseases
Early infantile epileptic encephalopathy; Ohtahara syndrome
GWAS
Apolipoprotein B levels (
32203549
)
Height (
31562340
)
LDL cholesterol levels (
32203549
)
Low density lipoprotein cholesterol levels (
32154731
)
Plasma amyloid beta peptide concentrations (ABx-42) (
24535457
)
Interacting Genes
21 interacting genes:
ANXA1
APEX1
APLF
APTX
BRCA1
BTRC
CHEK2
CSNK2A1
CSNK2A2
LIG3
NEIL1
OGG1
PARP1
PARP2
PCNA
PNKP
POLB
RNF146
TOPORS
UBE2I
UHRF2
50 interacting genes:
APP
CACFD1
CAMK2B
CARD10
CCDC14
CISD2
CNTROB
COL17A1
DRC4
DVL3
EIF4ENIF1
FADS6
GZMK
IKZF1
KANK2
KDM1A
KLHL12
KRTAP4-12
LMNA
MAGEA11
MCC
MEOX2
MGST2
MSANTD4
MYOZ1
OBI1
OGT
PICK1
PNMA5
POLB
PSTPIP1
RPRM
SFT2D1
SMAD5
SNX2
SP4
SUV39H1
SYNGR1
SYNGR3
SYP
TARBP2
TBC1D1
THAP1
TMEM239
TNIP1
TRIM37
XRCC1
XRCC4
ZBTB14
ZNF639
Entrez ID
7515
11284
HPRD ID
01909
09284
Ensembl ID
ENSG00000073050
ENSG00000039650
Uniprot IDs
B2RCY5
P18887
Q59HH7
Q96T60
PDB IDs
1CDZ
1XNA
1XNT
2D8M
2W3O
3K75
3K77
3LQC
5E6Q
5W7X
5W7Y
6WH1
6WH2
2BRF
2W3O
Enriched GO Terms of Interacting Partners
?
Damaged DNA Binding
DNA Repair
DNA Damage Response
DNA Metabolic Process
Base-excision Repair, Gap-filling
Nucleoplasm
Double-strand Break Repair
Macromolecule Metabolic Process
Cellular Response To Stress
Base-excision Repair
Nucleic Acid Metabolic Process
Nucleus
DNA-(apurinic Or Apyrimidinic Site) Endonuclease Activity
Nucleobase-containing Compound Metabolic Process
Response To Stress
Double-strand Break Repair Via Nonhomologous End Joining
DNA Modification
Class I DNA-(apurinic Or Apyrimidinic Site) Endonuclease Activity
Poly-ADP-D-ribose Binding
Catalytic Activity
Regulation Of DNA Metabolic Process
Transferase Activity
Regulation Of DNA Repair
Post-translational Protein Modification
DNA Recombination
Response To Radiation
NAD+-protein-serine ADP-ribosyltransferase Activity
Polynucleotide 3'-phosphatase Activity
SUMO Transferase Activity
DNA Binding
Intrinsic Apoptotic Signaling Pathway In Response To DNA Damage
Regulation Of Cellular Response To Stress
Regulation Of Nucleobase-containing Compound Metabolic Process
DNA Repair-dependent Chromatin Remodeling
DNA ADP-ribosylation
NAD DNA ADP-ribosyltransferase Activity
Protein Kinase CK2 Complex
Response To Oxidative Stress
Chromatin Organization
Negative Regulation Of Metabolic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Enzyme Binding
Protein Localization To Chromosome
PML Body
Chromatin Remodeling
Protein Modification Process
Chromosome
Protein Modification By Small Protein Conjugation
Negative Regulation Of Macromolecule Metabolic Process
Regulation Of Primary Metabolic Process
Regulation Of Long-term Neuronal Synaptic Plasticity
Protein Binding
Identical Protein Binding
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Neuronal Synaptic Plasticity
Negative Regulation Of RNA Metabolic Process
Synaptic Vesicle
Negative Regulation Of RNA Biosynthetic Process
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of Transcription By RNA Polymerase II
Enzyme Binding
Base-excision Repair
Immunoglobulin V(D)J Recombination
Regulation Of Synaptic Plasticity
Regulation Of Transcription By Glucose
Negative Regulation Of Macromolecule Biosynthetic Process
Regulation Of Transcription By RNA Polymerase II
Regulation Of Cellular Component Organization
Regulation Of Synaptic Vesicle Priming
Negative Regulation Of Biosynthetic Process
Protein Monoubiquitination
Negative Regulation Of Macromolecule Metabolic Process
Nuclear Lamina
Double-strand Break Repair Via Nonhomologous End Joining
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Tagcloud (Difference)
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Tagcloud (Intersection)
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