SDHB and XRN1

Number of citations of the paper that reports this interaction (PMID 15231747)
44

Data Source:
BioGRID (two hybrid)

		SDHB	XRN1
Gene Name		succinate dehydrogenase complex, subunit B, iron sulfur (Ip)	5-3 exoribonuclease 1
Image		No pdb structure	No pdb structure
Gene Ontology Annotations	Cellular Component	Mitochondrion Mitochondrial Inner Membrane Mitochondrial Respiratory Chain Complex II Extracellular Vesicular Exosome	Cytoplasmic MRNA Processing Body Cytoplasm Golgi Apparatus Cytosol Plasma Membrane Membrane Intermediate Filament Cytoskeleton
	Molecular Function	Protein Binding Succinate Dehydrogenase (ubiquinone) Activity Electron Carrier Activity Metal Ion Binding Ubiquinone Binding 2 Iron, 2 Sulfur Cluster Binding 3 Iron, 4 Sulfur Cluster Binding 4 Iron, 4 Sulfur Cluster Binding	DNA Binding Exonuclease Activity Protein Binding Poly(A) RNA Binding
	Biological Process	Tricarboxylic Acid Cycle Succinate Metabolic Process Aerobic Respiration Respiratory Electron Transport Chain Cellular Metabolic Process Small Molecule Metabolic Process	Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay Nuclear-transcribed MRNA Catabolic Process Gene Expression RRNA Catabolic Process Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay Nuclear MRNA Surveillance Histone MRNA Catabolic Process Nucleic Acid Phosphodiester Bond Hydrolysis
Pathways		Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins. Respiratory electron transport Pyruvate metabolism and Citric Acid (TCA) cycle The citric acid (TCA) cycle and respiratory electron transport Citric acid cycle (TCA cycle)	Regulation of mRNA stability by proteins that bind AU-rich elements mRNA decay by 5' to 3' exoribonuclease Tristetraprolin (TTP) destabilizes mRNA Deadenylation-dependent mRNA decay Butyrate Response Factor 1 (BRF1) destabilizes mRNA
Drugs
Diseases
GWAS		Height ( 20189936)
Protein-Protein Interactions		5 interactors: ABCA1 GEM PIK3R5 SPRY2 XRN1	62 interactors: ALDOA ANGPTL6 AP1G2 ATP5G2 B3GALT6 BAG6 C1GALT1 CBX5 CCT5 CD97 CENPBD1 CHD4 CTSB CTSH DCP1A DCP1B DNASE2 DPP7 DXO EXOSC1 EXOSC10 EXOSC6 EXOSC8 FADS1 GLMP HEATR1 HNRNPA1 KATNB1 LDHA LEPR LGALS3BP LINC01541 LSM4 MAN2C1 MFSD5 MTCH2 NDUFA13 NDUFB10 NDUFB9 PABPC4 PLEKHG2 POLD2 PPP2CA PRADC1 PSMB5 RBMX RNF187 SDHB SKIV2L SKIV2L2 SMARCD2 SNHG1 SPATA20 SRRM2 STAM2 TMEM50A UPF1 UPF2 UPF3B VWA5B2 WAPAL ZFP36
Entrez ID		6390	54464
HPRD ID		01707	10470
Ensembl ID		ENSG00000117118	ENSG00000114127
Uniprot IDs		P21912	Q8IZH2
PDB IDs
Enriched GO Terms of Interacting Partners?		Positive Regulation Of Protein Kinase B Signaling Regulation Of Protein Kinase B Signaling Interleukin-1 Beta Secretion Apolipoprotein A-I-mediated Signaling Pathway Interleukin-1 Secretion Positive Regulation Of Protein Serine/threonine Kinase Activity Negative Regulation Of Neurotrophin TRK Receptor Signaling Pathway Nuclear MRNA Surveillance Cell Surface Receptor Signaling Pathway Regulation Of MAP Kinase Activity Negative Regulation Of Cholesterol Storage Lung Growth High-density Lipoprotein Particle Assembly RNA Surveillance Establishment Of Organelle Localization Intracellular Cholesterol Transport Intracellular Sterol Transport Regulation Of Neurotrophin TRK Receptor Signaling Pathway Histone MRNA Catabolic Process Phospholipid Homeostasis Platelet Dense Granule Organization Regulation Of Phosphorus Metabolic Process RRNA Catabolic Process Phospholipid Efflux Phagocytosis, Engulfment Bud Elongation Involved In Lung Branching Response To Low-density Lipoprotein Particle Interleukin-1 Beta Production Organelle Localization Cellular Response To Cholesterol Negative Regulation Of Macrophage Derived Foam Cell Differentiation Positive Regulation Of MAPK Cascade Reverse Cholesterol Transport Response To Laminar Fluid Shear Stress Membrane Invagination Regulation Of Intracellular Signal Transduction Protein-lipid Complex Assembly Response To Lipoprotein Particle Positive Regulation Of Protein Kinase Activity Cellular Response To Sterol Positive Regulation Of Cholesterol Efflux Negative Regulation Of Peptidyl-threonine Phosphorylation Negative Regulation Of Lipid Storage Positive Regulation Of Kinase Activity Negative Regulation Of Ras GTPase Activity Positive Regulation Of Cholesterol Transport Histone MRNA Metabolic Process Negative Regulation Of Fibroblast Growth Factor Receptor Signaling Pathway Regulation Of Cholesterol Efflux Phosphatidylinositol 3-kinase Signaling	RNA Catabolic Process Nuclear-transcribed MRNA Catabolic Process MRNA Catabolic Process MRNA Metabolic Process Cellular Macromolecule Catabolic Process Aromatic Compound Catabolic Process Catabolic Process Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay Cellular Nitrogen Compound Metabolic Process Nitrogen Compound Metabolic Process Nucleobase-containing Compound Metabolic Process RRNA Processing RNA Processing RRNA Metabolic Process Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process RNA Metabolic Process Generation Of Precursor Metabolites And Energy Ribosome Biogenesis Cellular Metabolic Process Respiratory Electron Transport Chain Electron Transport Chain RNA Splicing RNA Localization RNA Export From Nucleus Gene Expression Cellular Respiration MRNA Processing Energy Derivation By Oxidation Of Organic Compounds Ribonucleoprotein Complex Biogenesis Cellular Process Nuclear MRNA Surveillance Metabolic Process Nuclear Export MRNA Transport RNA Surveillance MRNA Splicing, Via Spliceosome RNA Splicing, Via Transesterification Reactions Histone MRNA Catabolic Process ATP Metabolic Process Dosage Compensation By Inactivation Of X Chromosome Cellular Response To Thyroid Hormone Stimulus RNA Transport RNA Destabilization Dosage Compensation MRNA Export From Nucleus Posttranscriptional Regulation Of Gene Expression
Tagcloud ?		alters anatomical bacteremia bacterium colonization colonizing competitors divergent fitness frda fumc genitourinary gluconeogenesis glycolysis mirabilis niche nutritional occupying pentose pfka pgi polymicrobial proteus pyka requirements tca tpia uncomplicated uropathogenic	alters artificial avirulence bisexual capsule changing constantly coordinated corresponds cryptococcosis cryptococcus encountering environments exonuclease habitat impairs interdependent invertebrate lac1 mating melanin neoformans opportunistic rrp44 uni virulence xrn1delta xrn1p xrn2
Tagcloud (Difference) ?		anatomical bacteremia bacterium colonization colonizing competitors divergent fitness frda fumc genitourinary gluconeogenesis glycolysis mirabilis niche nutritional occupying pentose pfka pgi polymicrobial proteus pyka requirements tca tpia uncomplicated uropathogenic	artificial avirulence bisexual capsule changing constantly coordinated corresponds cryptococcosis cryptococcus encountering environments exonuclease habitat impairs interdependent invertebrate lac1 mating melanin neoformans opportunistic rrp44 uni virulence xrn1delta xrn1p xrn2
Tagcloud (Intersection) ?		alters