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LSM2 and TRIM54
Number of citations of the paper that reports this interaction (PMID
25416956
)
0
Data Source:
BioGRID
(two hybrid)
LSM2
TRIM54
Gene Name
LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
tripartite motif containing 54
Image
No pdb structure
Gene Ontology Annotations
Cellular Component
Nucleoplasm
Cytosol
Catalytic Step 2 Spliceosome
Microtubule
Microtubule Associated Complex
Z Disc
Molecular Function
Protein Binding
U6 SnRNA Binding
Ral GTPase Binding
Protein Kinase Binding
Poly(A) RNA Binding
Signal Transducer Activity
Microtubule Binding
Zinc Ion Binding
Biological Process
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
MRNA Splicing, Via Spliceosome
RNA Splicing
Gene Expression
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Microtubule-based Process
Negative Regulation Of Microtubule Depolymerization
Signal Transduction
Multicellular Organismal Development
Cell Differentiation
Pathways
Processing of Capped Intron-Containing Pre-mRNA
mRNA Splicing
mRNA Splicing - Minor Pathway
mRNA Splicing - Major Pathway
mRNA decay by 5' to 3' exoribonuclease
Deadenylation-dependent mRNA decay
Drugs
Diseases
GWAS
Protein-Protein Interactions
31 interactors:
AES
BANP
C14orf1
CLNS1A
CRMP1
DDX20
DNAJA1
EXOSC10
GBP2
KRT13
LNX1
LSM1
LSM3
LSM5
LSM6
LSM7
LSM8
MAGEA6
MEOX2
PRCC
RALA
REL
RSRC1
SF3B2
SMN1
SNRPB
SNRPD2
SNRPE
TRIM54
ZBTB16
ZNF408
127 interactors:
ADCY4
ALS2CR11
ARFIP2
ARHGEF5
ATXN3
ATXN3L
ATXN7
BYSL
C12orf49
C1orf109
C1orf216
C1QTNF2
CALM3
CARD9
CCDC102B
CCDC146
CCDC28A
CCDC67
CCDC87
CDK18
CDKN1A
CEP57L1
CHCHD2
CKM
CRADD
CWF19L2
CYTH4
DCUN1D1
DNAL4
DTX2
EHHADH
EIF4E2
ELMO1
ENKD1
EPM2AIP1
EXOSC5
FAM110A
FAM124A
FAM124B
FAM161A
FARS2
FBF1
FLNC
GEM
GMCL1
GTF2IRD2
HAUS1
ING3
INPP5J
IQUB
JOSD1
KDM1A
KIFC3
KLHL38
KPNA2
KRT6A
KRT6B
KRT6C
LENG1
LIN37
LMO2
LNX1
LSM2
MAPK3
MBD3
MCM7
MEAF6
MFAP1
MID2
MYO5B
NGLY1
OSTF1
OTUB1
OTUB2
PIK3R3
PPP1R18
PRF1
RABGEF1
RAD23A
RBM41
RCOR3
RSRC2
SCNM1
SDCBP
SENP3
SH2D1B
SMARCE1
SNF8
SPG21
SSX2IP
STAM
STRA13
TBC1D22B
TCEA2
TCEB3
THOC1
TRIM55
TRIM63
TSHZ3
TTC23
UBE2D3
UBE2I
UBE2U
UCHL1
UCHL3
UCHL5
USHBP1
USP15
USP18
USP2
USP21
USP33
USP4
USP5
USP7
USP8
UTP14C
VPS28
WDR34
WDYHV1
YOD1
ZBTB16
ZGPAT
ZNF250
ZNF417
ZNF572
ZNF587
Entrez ID
57819
57159
HPRD ID
06282
05928
Ensembl ID
ENSG00000204392
ENSG00000138100
Uniprot IDs
Q9Y333
Q9BYV2
PDB IDs
3Q1D
Enriched GO Terms of Interacting Partners
?
RNA Splicing
MRNA Metabolic Process
MRNA Processing
RNA Splicing, Via Transesterification Reactions
RNA Processing
MRNA Splicing, Via Spliceosome
RNA Metabolic Process
Spliceosomal SnRNP Assembly
Gene Expression
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic
Nucleobase-containing Compound Metabolic Process
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Cellular Nitrogen Compound Metabolic Process
Ribonucleoprotein Complex Biogenesis
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
Histone MRNA Metabolic Process
Nitrogen Compound Metabolic Process
Nuclear-transcribed MRNA Catabolic Process
MRNA Catabolic Process
Ribonucleoprotein Complex Assembly
RNA Catabolic Process
NcRNA Metabolic Process
Aromatic Compound Catabolic Process
Histone MRNA Catabolic Process
Spliceosomal Complex Assembly
Cellular Metabolic Process
Cellular Macromolecule Catabolic Process
Cellular Macromolecular Complex Assembly
Metabolic Process
Termination Of RNA Polymerase II Transcription
Nuclear Retention Of Unspliced Pre-mRNA At The Site Of Transcription
Catabolic Process
DNA-templated Transcription, Termination
Transcription From RNA Polymerase II Promoter
MRNA 3'-end Processing
Membrane Raft Localization
Positive Regulation Of Anoikis
Nuclear Polyadenylation-dependent RRNA Catabolic Process
CUT Catabolic Process
Embryonic Pattern Specification
Cellular Process
Positive Regulation Of Apoptotic Process
Positive Regulation Of NK T Cell Differentiation
Positive Regulation Of Programmed Cell Death
Transcription, DNA-templated
Positive Regulation Of Cell Death
Male Germ-line Stem Cell Asymmetric Division
Somite Specification
Protein Deubiquitination
Protein Modification By Small Protein Removal
Ubiquitin-dependent Protein Catabolic Process
Modification-dependent Protein Catabolic Process
Proteolysis Involved In Cellular Protein Catabolic Process
Protein Catabolic Process
Cellular Protein Catabolic Process
Proteasome-mediated Ubiquitin-dependent Protein Catabolic Process
Proteasomal Protein Catabolic Process
Cellular Macromolecule Catabolic Process
Protein K48-linked Deubiquitination
Protein K63-linked Deubiquitination
Proteolysis
Regulation Of Proteasomal Protein Catabolic Process
Catabolic Process
Cellular Protein Metabolic Process
Regulation Of Metabolic Process
Cellular Protein Modification Process
Regulation Of Cellular Protein Metabolic Process
Regulation Of Protein Metabolic Process
Organelle Organization
Regulation Of Protein Catabolic Process
Protein Metabolic Process
Histone Deubiquitination
RNA Metabolic Process
Transcription, DNA-templated
Nucleobase-containing Compound Metabolic Process
Cellular Process
Monoubiquitinated Protein Deubiquitination
Histone Modification
Gene Expression
RNA Biosynthetic Process
Chromatin Modification
Positive Regulation Of Exosomal Secretion
Regulation Of Exosomal Secretion
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Cellular Metabolic Process
Cellular Nitrogen Compound Metabolic Process
Regulation Of Cellular Process
Negative Regulation Of Cellular Metabolic Process
Regulation Of Proteolysis
Protein Targeting To Vacuole Involved In Ubiquitin-dependent Protein Catabolic Process Via The Multivesicular Body Sorting Pathway
Chromatin Organization
Cellular Response To DNA Damage Stimulus
Nitrogen Compound Metabolic Process
Chromosome Organization
Cellular Response To Heat
Negative Regulation Of Cellular Protein Metabolic Process
Regulation Of Nitrogen Compound Metabolic Process
Tagcloud
?
angles
arrange
assemble
building
heptameric
heteroheptameric
hexameric
incorporate
lsm1
lsm23
lsm5
lsm57
lsm6
lsm657
lsm7
monomers
nonetheless
plastic
pockets
preferences
pull
ring
sme
smf
smg
solved
spliceosomal
Tagcloud (Difference)
?
angles
arrange
assemble
building
heptameric
heteroheptameric
hexameric
incorporate
lsm1
lsm23
lsm5
lsm57
lsm6
lsm657
lsm7
monomers
nonetheless
plastic
pockets
preferences
pull
ring
sme
smf
smg
solved
spliceosomal
Tagcloud (Intersection)
?