LSM2 and KRT13

Number of citations of the paper that reports this interaction (PMID 25416956)
0

Data Source:
BioGRID (two hybrid)

		LSM2	KRT13
Gene Name		LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	keratin 13, type I
Image		No pdb structure	No pdb structure
Gene Ontology Annotations	Cellular Component	Nucleoplasm Cytosol Catalytic Step 2 Spliceosome	Nucleus Keratin Filament Intermediate Filament Cytoskeleton Extracellular Vesicular Exosome
	Molecular Function	Protein Binding U6 SnRNA Binding Ral GTPase Binding Protein Kinase Binding Poly(A) RNA Binding	Structural Molecule Activity
	Biological Process	Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay MRNA Splicing, Via Spliceosome RNA Splicing Gene Expression Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay	Cytoskeleton Organization Response To Radiation Tongue Morphogenesis Cellular Response To Retinoic Acid
Pathways		Processing of Capped Intron-Containing Pre-mRNA mRNA Splicing mRNA Splicing - Minor Pathway mRNA Splicing - Major Pathway mRNA decay by 5' to 3' exoribonuclease Deadenylation-dependent mRNA decay
Drugs
Diseases
GWAS
Protein-Protein Interactions		31 interactors: AES BANP C14orf1 CLNS1A CRMP1 DDX20 DNAJA1 EXOSC10 GBP2 KRT13 LNX1 LSM1 LSM3 LSM5 LSM6 LSM7 LSM8 MAGEA6 MEOX2 PRCC RALA REL RSRC1 SF3B2 SMN1 SNRPB SNRPD2 SNRPE TRIM54 ZBTB16 ZNF408	46 interactors: ABI2 ABI3 AES ALS2CR11 AMOTL2 ANKRD36BP1 APC ATP5O BLOC1S6 C1orf109 C1orf216 CCDC101 CCHCR1 CCNC CEP57 CEP57L1 EIF4E2 EXOSC5 FAM127C FARS2 FBF1 GFAP GOLGA8EP IFT20 KLC3 KLC4 KRT2 KRT20 KRT4 KRT6A KRT6B KRT6C KRT7 KRT71 KRT79 KRT8 LSM2 MOS MYH1 PPP1R18 PSMB1 PSMB2 TMSB4X TRIM42 TSG101 TXLNA
Entrez ID		57819	3860
HPRD ID		06282	01016
Ensembl ID		ENSG00000204392	ENSG00000171401
Uniprot IDs		Q9Y333	A1A4E9 P13646
PDB IDs
Enriched GO Terms of Interacting Partners?		RNA Splicing MRNA Metabolic Process MRNA Processing RNA Splicing, Via Transesterification Reactions RNA Processing MRNA Splicing, Via Spliceosome RNA Metabolic Process Spliceosomal SnRNP Assembly Gene Expression Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic Nucleobase-containing Compound Metabolic Process Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Cellular Nitrogen Compound Metabolic Process Ribonucleoprotein Complex Biogenesis Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay Histone MRNA Metabolic Process Nitrogen Compound Metabolic Process Nuclear-transcribed MRNA Catabolic Process MRNA Catabolic Process Ribonucleoprotein Complex Assembly RNA Catabolic Process NcRNA Metabolic Process Aromatic Compound Catabolic Process Histone MRNA Catabolic Process Spliceosomal Complex Assembly Cellular Metabolic Process Cellular Macromolecule Catabolic Process Cellular Macromolecular Complex Assembly Metabolic Process Termination Of RNA Polymerase II Transcription Nuclear Retention Of Unspliced Pre-mRNA At The Site Of Transcription Catabolic Process DNA-templated Transcription, Termination Transcription From RNA Polymerase II Promoter MRNA 3'-end Processing Membrane Raft Localization Positive Regulation Of Anoikis Nuclear Polyadenylation-dependent RRNA Catabolic Process CUT Catabolic Process Embryonic Pattern Specification Cellular Process Positive Regulation Of Apoptotic Process Positive Regulation Of NK T Cell Differentiation Positive Regulation Of Programmed Cell Death Transcription, DNA-templated Positive Regulation Of Cell Death Male Germ-line Stem Cell Asymmetric Division Somite Specification	Cytoskeleton Organization Intermediate Filament Cytoskeleton Organization Intermediate Filament-based Process Organelle Organization Intermediate Filament Organization Regulation Of Canonical Wnt Signaling Pathway Negative Regulation Of Canonical Wnt Signaling Pathway Regulation Of Wnt Signaling Pathway Microtubule-based Process Cellular Localization Anaphase-promoting Complex-dependent Proteasomal Ubiquitin-dependent Protein Catabolic Process Negative Regulation Of Wnt Signaling Pathway Skin Development Regulation Of Cell Cycle Phase Transition Negative Regulation Of Cell Cycle Establishment Of Localization In Cell Mitotic Cell Cycle Phase Transition Cell Cycle Phase Transition Epidermis Development Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic Tissue Development Positive Regulation Of Canonical Wnt Signaling Pathway Maintenance Of Protein Location In Cell Epithelium Development Microtubule-based Transport Maintenance Of Protein Location Maintenance Of Location In Cell Anatomical Structure Development Cytoskeleton-dependent Intracellular Transport Viral Process Developmental Process Negative Regulation Of Mitotic Cell Cycle Phase Transition Cellular Macromolecule Catabolic Process Microtubule Anchoring Positive Regulation Of Wnt Signaling Pathway Keratinocyte Activation Positive Regulation Of Schwann Cell Proliferation Establishment Of Meiotic Spindle Orientation Negative Regulation Of Metaphase/anaphase Transition Of Meiotic Cell Cycle Opsin Transport Mitotic Cell Cycle Checkpoint Regulation Of Organelle Organization Regulation Of Cell Cycle Axon Cargo Transport Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay Cell Differentiation Canonical Wnt Signaling Pathway Involved In Positive Regulation Of Apoptotic Process Negative Regulation Of Ubiquitin-protein Ligase Activity Involved In Mitotic Cell Cycle DNA Damage Response, Signal Transduction By P53 Class Mediator Resulting In Cell Cycle Arrest
Tagcloud ?		angles arrange assemble building heptameric heteroheptameric hexameric incorporate lsm1 lsm23 lsm5 lsm57 lsm6 lsm657 lsm7 monomers nonetheless plastic pockets preferences pull ring sme smf smg solved spliceosomal	bisulfite chip deazaneplanocin determining dznep epigenetic h3k27me3 hsc3 hsc4 hypermethylated immunofluorescence insights keratin lys mechanistic modifications oscc osccs pathologies polycomb prc2 reactivated reportedly repressed repressive sas silenced transcriptionally trimethylation
Tagcloud (Difference) ?		angles arrange assemble building heptameric heteroheptameric hexameric incorporate lsm1 lsm23 lsm5 lsm57 lsm6 lsm657 lsm7 monomers nonetheless plastic pockets preferences pull ring sme smf smg solved spliceosomal	bisulfite chip deazaneplanocin determining dznep epigenetic h3k27me3 hsc3 hsc4 hypermethylated immunofluorescence insights keratin lys mechanistic modifications oscc osccs pathologies polycomb prc2 reactivated reportedly repressed repressive sas silenced transcriptionally trimethylation
Tagcloud (Intersection) ?