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SS18L1 and RFX6
Number of citations of the paper that reports this interaction (PubMedID
32296183
)
50
Data Source:
BioGRID
(two hybrid, two hybrid)
HPRD
(two hybrid)
SS18L1
RFX6
Description
SS18L1 subunit of BAF chromatin remodeling complex
regulatory factor X6
Image
No pdb structure
No pdb structure
GO Annotations
Cellular Component
Chromosome, Centromeric Region
Kinetochore
Condensed Chromosome, Centromeric Region
Nucleus
Nucleoplasm
Chromosome
Cytosol
NBAF Complex
Chromatin
Nucleus
Molecular Function
Transcription Coactivator Activity
Protein Binding
Transcription Cis-regulatory Region Binding
RNA Polymerase II Transcription Regulatory Region Sequence-specific DNA Binding
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
DNA-binding Transcription Factor Activity, RNA Polymerase II-specific
DNA-binding Transcription Activator Activity, RNA Polymerase II-specific
DNA Binding
DNA-binding Transcription Factor Activity
Protein Binding
Biological Process
Chromatin Organization
Dendrite Development
Positive Regulation Of DNA-templated Transcription
Positive Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of Dendrite Morphogenesis
Type B Pancreatic Cell Differentiation
Pancreatic A Cell Differentiation
Pancreatic D Cell Differentiation
Regulation Of DNA-templated Transcription
Regulation Of Transcription By RNA Polymerase II
Cell Differentiation
Endocrine Pancreas Development
Positive Regulation Of Insulin Secretion Involved In Cellular Response To Glucose Stimulus
Glucose Homeostasis
Positive Regulation Of DNA-templated Transcription
Positive Regulation Of Transcription By RNA Polymerase II
Regulation Of Insulin Secretion
Pancreatic Epsilon Cell Differentiation
Pathways
Regulation of MITF-M-dependent genes involved in pigmentation
Regulation of MITF-M-dependent genes involved in pigmentation
Regulation of endogenous retroelements by Piwi-interacting RNAs (piRNAs)
Formation of the canonical BAF (cBAF) complex
Formation of the non-canonical BAF (ncBAF) complex
Formation of neuronal progenitor and neuronal BAF (npBAF and nBAF)
Regulation of gene expression in beta cells
Drugs
Diseases
GWAS
Liver enzyme levels (alkaline phosphatase) (
33972514
)
Apolipoprotein A1 levels (
32203549
)
Aspartate aminotransferase levels (
33547301
)
Chronic obstructive pulmonary disease (
30804561
)
Creatine kinase levels (
29403010
)
Diastolic blood pressure (
27841878
)
Eosinophil count (
32888494
)
Eosinophil percentage of white cells (
32888494
)
Fasting glucose (
34059833
)
Height (
31562340
)
Inflammatory bowel disease (
27569725
)
Lung cancer (
28604730
)
Neutrophil percentage of granulocytes (
27863252
)
Offspring birth weight (
31043758
)
Prostate cancer (
31562322
20676098
26443449
)
Serum total protein levels (
29403010
)
Type 2 diabetes or prostate cancer (pleiotropy) (
33290408
)
Interacting Genes
43 interacting genes:
AATF
ANKRD22
ATF3
ATN1
BAG4
BICRAL
BRD1
C1orf94
CEP55
CREBBP
CSTF2
DGCR6
ELF5
EP300
FAM168A
GATAD1
HDAC2
HDAC4
HGS
LGALS3
MAPK1IP1L
MED30
MIA2
NAF1
NR1H3
PAX8
PCGF6
RFX6
RLIM
SF3B4
SMAD1
SMAD3
SMARCA4
SNRPB
SNRPC
SSBP3
STAT3
TAF9B
TCF7
TNK1
USP54
ZMIZ2
ZMYND19
41 interacting genes:
AGXT
ARNT2
CATSPER1
CCNK
CSTF2
CYFIP1
DGCR6
DMRT3
DTX2
DUSP21
ESR2
FHL3
FRS3
HGS
KCTD9
KIF1A
LGALS4
LMO3
MEMO1
NEDD9
PATZ1
PITX1
PLEKHN1
PRKAA1
PRKAA2
RFX2
RFX3
RIPK3
SAXO4
SNRPB
SNRPC
SS18L1
STK16
TEKT3
TEKT4
TENT5B
TLE5
USP2
VPS37C
ZMYND19
ZNF688
Entrez ID
26039
222546
HPRD ID
09398
11490
Ensembl ID
ENSG00000184402
ENSG00000185002
Uniprot IDs
B4DSR7
O75177
Q8HWS3
PDB IDs
Enriched GO Terms of Interacting Partners
?
Regulation Of Transcription By RNA Polymerase II
Chromatin
Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of RNA Metabolic Process
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
Positive Regulation Of Transcription By RNA Polymerase II
Regulation Of DNA-templated Transcription
Positive Regulation Of RNA Biosynthetic Process
Positive Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Positive Regulation Of RNA Metabolic Process
Negative Regulation Of RNA Metabolic Process
Regulation Of Primary Metabolic Process
Nucleoplasm
Transcription Cis-regulatory Region Binding
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of Transcription By RNA Polymerase II
Nucleus
Positive Regulation Of Macromolecule Biosynthetic Process
Positive Regulation Of Biosynthetic Process
Negative Regulation Of DNA-templated Transcription
Regulation Of Macromolecule Metabolic Process
Negative Regulation Of RNA Biosynthetic Process
Regulation Of Macromolecule Biosynthetic Process
Transcription Regulator Complex
Chromatin DNA Binding
Chromatin Remodeling
Positive Regulation Of Macromolecule Metabolic Process
Regulation Of Gene Expression
DNA-binding Transcription Factor Binding
Histone H3K27 Acetyltransferase Activity
Transcription Coactivator Activity
RNA Polymerase II-specific DNA-binding Transcription Factor Binding
Positive Regulation Of MiRNA Transcription
Regulation Of Metabolic Process
Negative Regulation Of Developmental Process
Regulation Of Cell Differentiation
Histone H3K18 Acetyltransferase Activity
N-terminal Peptidyl-lysine Acetylation
Peptide Lactyltransferase (CoA-dependent) Activity
Sterol Response Element Binding
Positive Regulation Of MiRNA Metabolic Process
Positive Regulation Of Metabolic Process
Chromatin Organization
SMAD Protein Signal Transduction
Regulation Of Stem Cell Population Maintenance
Regulation Of MiRNA Transcription
Negative Regulation Of Macromolecule Metabolic Process
Regulation Of MiRNA Metabolic Process
DNA-binding Transcription Activator Activity, RNA Polymerase II-specific
Cilium-dependent Cell Motility
Axonemal A Tubule Inner Sheath
Cilium Movement
Histone H2BS36 Kinase Activity
[hydroxymethylglutaryl-CoA Reductase (NADPH)] Kinase Activity
Sperm Motility
Flagellated Sperm Motility
Sperm Flagellum
Cilium Movement Involved In Cell Motility
Microtubule-based Movement
Protein Localization To Lipid Droplet
Protein Binding
Nucleus
Cilium
Negative Regulation Of Tubulin Deacetylation
Negative Regulation Of Hepatocyte Apoptotic Process
AMP-activated Protein Kinase Activity
Protein Localization To Vacuole
Regulation Of Tubulin Deacetylation
Lipid Droplet Disassembly
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
Motile Cilium
Positive Regulation Of RNA Metabolic Process
Phosphatidylethanolamine Biosynthetic Process
Regulation Of Protein Deacetylation
Regulation Of Stress Granule Assembly
Nucleotide-activated Protein Kinase Complex
Positive Regulation Of RNA Biosynthetic Process
Positive Regulation Of DNA-templated Transcription
Protein Localization To Lysosome
Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of RNA Metabolic Process
Positive Regulation Of Macromolecule Metabolic Process
Positive Regulation Of Macromolecule Biosynthetic Process
Regulation Of Primary Metabolic Process
Cilium Organization
Protein Transport To Vacuole Involved In Ubiquitin-dependent Protein Catabolic Process Via The Multivesicular Body Sorting Pathway
Fatty Acid Homeostasis
Hepatocyte Apoptotic Process
U2-type Prespliceosome
Positive Regulation Of Biosynthetic Process
Organelle Disassembly
Cellular Response To Prostaglandin E Stimulus
U1 SnRNP
Regulation Of Gene Expression
Phosphatidylcholine Biosynthetic Process
Regulation Of Macromolecule Biosynthetic Process
Organelle Assembly
Positive Regulation Of Glycolytic Process
Regulation Of DNA-templated Transcription
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