DDX58 and UBE2D3

Number of citations of the paper that reports this interaction (PMID 17719635)
10

Data Source:
BioGRID (enzymatic study)

		DDX58	UBE2D3
Gene Name		DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	ubiquitin-conjugating enzyme E2D 3
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Gene Ontology Annotations	Cellular Component	Cytoplasm Cytosol Tight Junction Actin Cytoskeleton Ruffle Membrane	Nucleoplasm Cytosol Plasma Membrane Endosome Membrane Extracellular Vesicular Exosome
	Molecular Function	Double-stranded DNA Binding Double-stranded RNA Binding Single-stranded RNA Binding Helicase Activity Protein Binding ATP Binding Zinc Ion Binding Identical Protein Binding	Ubiquitin-protein Transferase Activity Protein Binding ATP Binding Ligase Activity Ubiquitin Conjugating Enzyme Activity
	Biological Process	Positive Regulation Of Defense Response To Virus By Host Metabolic Process Detection Of Virus Response To Virus Viral Process Regulation Of Cell Migration Negative Regulation Of Type I Interferon Production Positive Regulation Of Interferon-alpha Production Positive Regulation Of Interferon-beta Production Regulation Of Type III Interferon Production Cytoplasmic Pattern Recognition Receptor Signaling Pathway In Response To Virus RIG-I Signaling Pathway Positive Regulation Of Transcription Factor Import Into Nucleus Response To Exogenous DsRNA Innate Immune Response Positive Regulation Of Transcription From RNA Polymerase II Promoter Positive Regulation Of Sequence-specific DNA Binding Transcription Factor Activity	Negative Regulation Of Transcription From RNA Polymerase II Promoter Protein Polyubiquitination Toll-like Receptor Signaling Pathway MyD88-independent Toll-like Receptor Signaling Pathway DNA Repair Transcription, DNA-templated Transcription Initiation From RNA Polymerase II Promoter Cellular Protein Modification Process Ubiquitin-dependent Protein Catabolic Process Protein Monoubiquitination Apoptotic Process Transforming Growth Factor Beta Receptor Signaling Pathway Gene Expression Protein Ubiquitination BMP Signaling Pathway Negative Regulation Of Type I Interferon Production Toll-like Receptor 3 Signaling Pathway Toll-like Receptor 4 Signaling Pathway TRIF-dependent Toll-like Receptor Signaling Pathway Proteasome-mediated Ubiquitin-dependent Protein Catabolic Process Innate Immune Response Regulation Of Transcription From RNA Polymerase II Promoter In Response To Hypoxia Protein K48-linked Ubiquitination Protein K11-linked Ubiquitination Cellular Response To Hypoxia
Pathways		TRAF3-dependent IRF activation pathway RIG-I/MDA5 mediated induction of IFN-alpha/beta pathways Negative regulators of RIG-I/MDA5 signaling ISG15 antiviral mechanism Interferon Signaling TRAF6 mediated IRF7 activation Cytokine Signaling in Immune system TRAF6 mediated NF-kB activation NF-kB activation through FADD/RIP-1 pathway mediated by caspase-8 and -10 Antiviral mechanism by IFN-stimulated genes Innate Immune System	Loss of Function of TGFBR2 in Cancer Cellular response to hypoxia Antigen processing: Ubiquitination & Proteasome degradation Regulation of Hypoxia-inducible Factor (HIF) by oxygen Negative regulators of RIG-I/MDA5 signaling Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha SMAD2/3 MH2 Domain Mutants in Cancer TGFBR1 LBD Mutants in Cancer Downregulation of SMAD2/3:SMAD4 transcriptional activity Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer Signaling by BMP Activated TLR4 signalling Generic Transcription Pathway Class I MHC mediated antigen processing & presentation Innate Immune System TGFBR2 MSI Frameshift Mutants in Cancer SMAD2/3 Phosphorylation Motif Mutants in Cancer Loss of Function of SMAD2/3 in Cancer TRIF-mediated TLR3/TLR4 signaling IKK complex recruitment mediated by RIP1 TGFBR2 Kinase Domain Mutants in Cancer Loss of Function of SMAD4 in Cancer TGFBR1 KD Mutants in Cancer MyD88-independent cascade Loss of Function of TGFBR1 in Cancer RIG-I/MDA5 mediated induction of IFN-alpha/beta pathways Toll-Like Receptors Cascades Signaling by TGF-beta Receptor Complex in Cancer Signaling by TGF-beta Receptor Complex Toll Like Receptor 4 (TLR4) Cascade Toll Like Receptor 3 (TLR3) Cascade SMAD4 MH2 Domain Mutants in Cancer Adaptive Immune System
Drugs
Diseases
GWAS
Protein-Protein Interactions		13 interactors: CYLD MAVS PRKCG PRKRIR RNF135 TRIM25 UBC UBE2D1 UBE2D2 UBE2D3 UBE2K USP3 WRNIP1	180 interactors: AMBRA1 AMFR ARIH1 ARIH2 BARD1 BFAR BIRC2 BIRC3 BIRC7 BIRC8 BMI1 BRCA1 BTRC CADPS2 CBL CBLC CHFR CNOT4 CREB3L1 CREB3L2 CUL3 DBN1 DDX58 DTX1 DTX2 DTX3 DTX3L DZIP3 EPS15 F12 FBXL2 FBXO2 FBXO25 FBXO32 FBXW11 FBXW8 FOCAD FZR1 HDAC6 HERC1 HERC2 HUWE1 IKBKG ITCH KAT2B KIAA1107 LRSAM1 MAP3K1 MARCH3 MARCH5 MARCH7 MARCH8 MDM2 MDM4 MEX3B MGRN1 MIB1 MID1 MKRN1 MKRN3 MSL1 MSL2 MUL1 MYLIP NEDD4 NEDD4L NFKB1 NFKBIA NHLRC1 OTUB1 PARK2 PCNA PDCD5 PJA1 PJA2 POLL POLM PRPF19 RABGEF1 RBCK1 RBX1 RELA RFFL RFWD3 RING1 RLIM RMND5B RNF10 RNF103 RNF11 RNF111 RNF114 RNF115 RNF122 RNF125 RNF126 RNF13 RNF130 RNF14 RNF150 RNF165 RNF166 RNF167 RNF168 RNF181 RNF185 RNF2 RNF220 RNF25 RNF26 RNF31 RNF38 RNF4 RNF41 RNF43 RNF5 RNF8 RPLP1 RSPRY1 SAT1 SH3RF1 SHARPIN SIAH1 SIAH2 SKP1 SMURF1 SMURF2 STAM2 STAU1 STK25 STUB1 SYVN1 TOPORS TRAF6 TRAIP TRIM10 TRIM17 TRIM2 TRIM23 TRIM25 TRIM26 TRIM27 TRIM28 TRIM31 TRIM32 TRIM33 TRIM35 TRIM37 TRIM38 TRIM39 TRIM43 TRIM45 TRIM5 TRIM50 TRIM54 TRIM55 TRIM58 TRIM63 TRIM68 TRIM7 TRIM8 TUBA1A UBA1 UBA6 UBASH3B UBC UBE3A UBE4A UBE4B UBOX5 UBR5 UFM1 UHRF2 WSB1 WWP2 XIAP XPNPEP1 ZNRF1 ZNRF2 ZNRF4
Entrez ID		23586	7323
HPRD ID		13131	04269
Ensembl ID		ENSG00000107201	ENSG00000109332
Uniprot IDs		B3KWW1 F5H5W6 O95786	D6RAH7 P61077
PDB IDs		2LWD 2LWE 2QFB 2QFD 2RMJ 2YKG 3LRN 3LRR 3NCU 3OG8 3TMI 3ZD6 3ZD7 4AY2 4BPB	1X23 2FUH 3L1Z 3RPG 3UGB
Enriched GO Terms of Interacting Partners?		Negative Regulation Of Type I Interferon Production Regulation Of Type I Interferon Production Response To Stress Regulation Of Innate Immune Response Innate Immune Response Pattern Recognition Receptor Signaling Pathway Innate Immune Response-activating Signal Transduction Activation Of Innate Immune Response Positive Regulation Of Innate Immune Response Regulation Of Transcription From RNA Polymerase II Promoter In Response To Hypoxia Negative Regulation Of Cytokine Production Immune Response Ubiquitin-dependent Protein Catabolic Process Modification-dependent Protein Catabolic Process Defense Response Protein K48-linked Ubiquitination Proteolysis Involved In Cellular Protein Catabolic Process Cellular Protein Catabolic Process Protein Ubiquitination Protein Catabolic Process Protein Modification By Small Protein Conjugation Regulation Of Transcription From RNA Polymerase II Promoter In Response To Stress Regulation Of DNA-templated Transcription In Response To Stress Protein Polyubiquitination TRIF-dependent Toll-like Receptor Signaling Pathway MyD88-independent Toll-like Receptor Signaling Pathway Toll-like Receptor 3 Signaling Pathway Immune Response-regulating Signaling Pathway Toll-like Receptor 4 Signaling Pathway Cellular Macromolecule Catabolic Process Regulation Of Immune Response Proteasome-mediated Ubiquitin-dependent Protein Catabolic Process Proteasomal Protein Catabolic Process Regulation Of Cytokine Production Cellular Response To Hypoxia Cellular Response To Decreased Oxygen Levels Immune System Process Toll-like Receptor Signaling Pathway Cellular Response To Oxygen Levels Cellular Protein Modification Process Positive Regulation Of Immune Response Response To Stimulus Regulation Of Protein Catabolic Process Regulation Of Immune System Process Cellular Response To Stimulus Regulation Of Proteasomal Protein Catabolic Process Positive Regulation Of Immune System Process Cellular Response To Stress Proteolysis Regulation Of I-kappaB Kinase/NF-kappaB Signaling	Protein Ubiquitination Protein Modification By Small Protein Conjugation Cellular Protein Modification Process Protein Polyubiquitination Cellular Protein Metabolic Process Protein Metabolic Process Proteolysis Involved In Cellular Protein Catabolic Process Protein Catabolic Process Cellular Protein Catabolic Process Modification-dependent Protein Catabolic Process Ubiquitin-dependent Protein Catabolic Process Cellular Macromolecule Catabolic Process Protein Autoubiquitination Cellular Metabolic Process Proteolysis Catabolic Process Protein Ubiquitination Involved In Ubiquitin-dependent Protein Catabolic Process Proteasomal Protein Catabolic Process Proteasome-mediated Ubiquitin-dependent Protein Catabolic Process Protein K63-linked Ubiquitination Protein Monoubiquitination Metabolic Process Protein K48-linked Ubiquitination Regulation Of Signal Transduction Regulation Of Protein Ubiquitination Regulation Of Signaling Regulation Of Sequence-specific DNA Binding Transcription Factor Activity Positive Regulation Of Sequence-specific DNA Binding Transcription Factor Activity Cellular Response To Stress Cellular Response To Stimulus Negative Regulation Of Cellular Metabolic Process Regulation Of I-kappaB Kinase/NF-kappaB Signaling Cellular Process Positive Regulation Of NF-kappaB Transcription Factor Activity Regulation Of Protein Metabolic Process Regulation Of Viral Release From Host Cell Negative Regulation Of Viral Release From Host Cell Positive Regulation Of Protein Ubiquitination Response To Stress Negative Regulation Of Signal Transduction Positive Regulation Of I-kappaB Kinase/NF-kappaB Signaling Apoptotic Process Negative Regulation Of Signaling Response To Stimulus Histone Ubiquitination Regulation Of Cellular Protein Metabolic Process Programmed Cell Death Cell Death Death Regulation Of Intracellular Signal Transduction
Tagcloud ?		adenovirus apobec3a exact expand hiv ifi27 ifi44l ifit1 ifit2 ifit3 innate irf7 isg15 isg20 isgs mdms microarray monocyte mx1 mx2 reservoirs rig rsad2 select stat1 tnfsf10 trail viperin vpr	2h5 accompanies anova dynactin gadd45a gtf2h5 invites keuls macaques malfunctioning nbn1 ndd ndds newman ovx perimenopausal presenilin1 proteosome psen1 rad23a raphe scna serotonin speculation subserving symptomology ube3a ubea5 ubiquinase
Tagcloud (Difference) ?		adenovirus apobec3a exact expand hiv ifi27 ifi44l ifit1 ifit2 ifit3 innate irf7 isg15 isg20 isgs mdms microarray monocyte mx1 mx2 reservoirs rig rsad2 select stat1 tnfsf10 trail viperin vpr	2h5 accompanies anova dynactin gadd45a gtf2h5 invites keuls macaques malfunctioning nbn1 ndd ndds newman ovx perimenopausal presenilin1 proteosome psen1 rad23a raphe scna serotonin speculation subserving symptomology ube3a ubea5 ubiquinase
Tagcloud (Intersection) ?