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CPSF6 and APBB1
Number of citations of the paper that reports this interaction (PubMedID
16055720
)
76
Data Source:
BioGRID
(pull down)
CPSF6
APBB1
Description
cleavage and polyadenylation specific factor 6
amyloid beta precursor protein binding family B member 1
Image
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Perichromatin Fibrils
Cytoplasm
MRNA Cleavage And Polyadenylation Specificity Factor Complex
MRNA Cleavage Factor Complex
Membrane
Nuclear Speck
Interchromatin Granule
Paraspeckles
Ribonucleoprotein Complex
Nucleus
Nucleoplasm
Cytoplasm
Endoplasmic Reticulum
Plasma Membrane
Membrane
Nuclear Speck
Lamellipodium
Growth Cone
Cell Projection
Synapse
Molecular Function
Nucleic Acid Binding
RNA Binding
MRNA Binding
Protein Binding
Ribosomal Large Subunit Binding
Exon-exon Junction Complex Binding
Amyloid-beta Binding
Chromatin Binding
Transcription Coactivator Activity
Protein Binding
Ubiquitin Protein Ligase Binding
Histone Binding
Low-density Lipoprotein Particle Receptor Binding
Molecular Adaptor Activity
Proline-rich Region Binding
Biological Process
MRNA Processing
MRNA 3'-end Processing
Positive Regulation Of RNA Export From Nucleus
Protein Tetramerization
Protein Heterotetramerization
MRNA Alternative Polyadenylation
Co-transcriptional MRNA 3'-end Processing, Cleavage And Polyadenylation Pathway
Negative Regulation Of Transcription By RNA Polymerase II
Chromatin Organization
Regulation Of DNA-templated Transcription
Apoptotic Process
Smooth Muscle Contraction
DNA Damage Response
Signal Transduction
Axonogenesis
Positive Regulation Of Neuron Projection Development
Positive Regulation Of Apoptotic Process
Positive Regulation Of DNA-templated Transcription
Positive Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of Protein Secretion
Negative Regulation Of Cell Cycle G1/S Phase Transition
Pathways
Signaling by cytosolic FGFR1 fusion mutants
Signaling by FGFR1 in disease
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks
Drugs
Diseases
GWAS
Height (
18391951
)
Medication use (agents acting on the renin-angiotensin system) (
31015401
)
Medication use (diuretics) (
31015401
)
Pneumoconiosis in silica exposure (
24986923
)
Smoking initiation (
33082346
)
Smoking initiation (ever regular vs never regular) (
30679032
)
Smoking status (ever vs never smokers) (
30643258
)
Malaria (
31844061
)
Interacting Genes
50 interacting genes:
APBB1
ARMC7
CEBPA
CSNK2A1
EWSR1
FOXP1
GIN1
ITCH
ITSN2
KLHL12
MIR10B
MIR128-1
MIR128-2
MIR138-2
MIR155
MIR17
MIR18B
MIR199A1
MIR19A
MIR19B1
MIR19B2
MIR25
MIR29A
MIR34A
MIR92A1
MIR93
MIRLET7A1
MIRLET7B
MIRLET7C
MIRLET7D
MIRLET7F2
NCK2
NEDD4
NUDT21
OGT
OTUB2
PLSCR1
PPIL1
PRPF40A
SRSF7
TOLLIP
UBAC1
UBQLN4
USP21
WBP4
WWOX
WWP1
WWP2
YES1
ZMYND19
72 interacting genes:
ABI1
ABL1
ALK
ANXA1
APLP1
APLP2
APP
ATM
ATR
ATXN1
ATXN1L
CCDC97
CHERP
CLSTN1
CPSF6
CPSF7
CYFIP1
CYFIP2
DDX17
DDX3X
DDX46
DHX15
DHX9
DIAPH1
DIAPH2
EGFR
ELMO1
ENAH
ERBB2
EVL
FASLG
HNRNPH1
HNRNPK
HTATSF1
KAT5
KHDRBS1
KHSRP
LRP1
LRP2
NONO
PABPC1
PQBP1
PRNP
PTBP1
RBM17
RPL4
SF1
SF3A1
SF3A2
SF3A3
SF3B1
SF3B2
SF3B3
SF3B4
SFPQ
SNCA
TENM1
TFCP2
THRAP3
TSHZ1
TSHZ2
TSHZ3
U2AF2
VASP
WAS
WASF2
WASL
WBP11
WIPF1
WIPF2
YBX1
YLPM1
Entrez ID
11052
322
HPRD ID
05401
04087
Ensembl ID
ENSG00000111605
ENSG00000166313
Uniprot IDs
Q16630
B7Z4M9
O00213
PDB IDs
3P5T
3P6Y
3Q2S
3Q2T
4B4N
4U0A
4U0B
4WYM
6AY9
6GX9
7SNQ
7ZUD
8CL1
8EJL
8GDV
9CNV
2E45
2HO2
2IDH
2OEI
3D8D
3D8E
3D8F
3DXC
3DXD
3DXE
5NQH
Enriched GO Terms of Interacting Partners
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RISC Complex
MiRNA-mediated Post-transcriptional Gene Silencing
Regulatory NcRNA-mediated Post-transcriptional Gene Silencing
Post-transcriptional Gene Silencing
MRNA Base-pairing Post-transcriptional Repressor Activity
Regulatory NcRNA-mediated Gene Silencing
Post-transcriptional Regulation Of Gene Expression
Negative Regulation Of Gene Expression
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Biosynthetic Process
Extracellular Vesicle
Negative Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Metabolic Process
MRNA 3'-UTR Binding
Regulation Of Gene Expression
MiRNA-mediated Gene Silencing By MRNA Destabilization
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Macromolecule Metabolic Process
MiRNA-mediated Gene Silencing By Inhibition Of Translation
Regulation Of Metabolic Process
Negative Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
Negative Regulation Of Cell Migration
Negative Regulation Of Translation
Negative Regulation Of Cell Motility
Negative Regulation Of Signal Transduction
Negative Regulation Of Locomotion
MRNA Destabilization
Negative Regulation Of Cell Communication
Negative Regulation Of Signaling
Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
RNA Destabilization
Negative Regulation Of Transmembrane Receptor Protein Serine/threonine Kinase Signaling Pathway
Positive Regulation Of MRNA Catabolic Process
Negative Regulation Of Cytokine Production
Regulation Of Cellular Response To Growth Factor Stimulus
Regulation Of Cardiac Muscle Hypertrophy
Negative Regulation Of Cholesterol Efflux
Negative Regulation Of Vascular Endothelial Growth Factor Production
Regulation Of Endothelial Cell Migration
Negative Regulation Of Multicellular Organismal Process
Positive Regulation Of MRNA Metabolic Process
Regulation Of Translation
Regulation Of Cell Growth Involved In Cardiac Muscle Cell Development
Negative Regulation Of Developmental Process
Positive Regulation Of Macromolecule Metabolic Process
Regulation Of Cardiac Muscle Cell Apoptotic Process
Negative Regulation Of Transport
Negative Regulation Of Cholesterol Transport
Negative Regulation Of Blood Vessel Endothelial Cell Migration
Negative Regulation Of Matrix Metallopeptidase Secretion
MRNA Metabolic Process
MRNA Processing
RNA Splicing
RNA Splicing, Via Transesterification Reactions
MRNA Splicing, Via Spliceosome
RNA Processing
Nucleic Acid Binding
RNA Metabolic Process
RNA Binding
Spliceosomal Complex
Spliceosomal Complex Assembly
Nucleic Acid Metabolic Process
U2-type Prespliceosome Assembly
U2 SnRNP
U2-type Spliceosomal Complex
Actin Polymerization Or Depolymerization
Nucleus
Nucleobase-containing Compound Metabolic Process
Protein-containing Complex Assembly
Nuclear Speck
Protein-RNA Complex Assembly
SH3 Domain Binding
MRNA Binding
Catalytic Step 2 Spliceosome
Protein-containing Complex Organization
U12-type Spliceosomal Complex
U2-type Precatalytic Spliceosome
Cellular Component Assembly
Regulation Of Primary Metabolic Process
Nucleoplasm
MRNA 3'-splice Site Recognition
Macromolecule Metabolic Process
Regulation Of Nucleobase-containing Compound Metabolic Process
Actin Filament Organization
Regulation Of RNA Metabolic Process
Regulation Of DNA-templated Transcription
Positive Regulation Of Cellular Component Organization
Regulation Of RNA Biosynthetic Process
Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Macromolecule Metabolic Process
Actin Binding
Alternative MRNA Splicing, Via Spliceosome
Profilin Binding
Negative Regulation Of Metabolic Process
Regulation Of RNA Splicing
SCAR Complex
Positive Regulation Of Macromolecule Metabolic Process
Regulation Of Cellular Component Organization
Lamellipodium
Regulation Of Macromolecule Biosynthetic Process
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