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CPSF6 and USP21
Number of citations of the paper that reports this interaction (PubMedID
32296183
)
50
Data Source:
BioGRID
(two hybrid)
CPSF6
USP21
Description
cleavage and polyadenylation specific factor 6
ubiquitin specific peptidase 21
Image
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Perichromatin Fibrils
Cytoplasm
MRNA Cleavage And Polyadenylation Specificity Factor Complex
MRNA Cleavage Factor Complex
Membrane
Nuclear Speck
Interchromatin Granule
Paraspeckles
Ribonucleoprotein Complex
Nucleus
Nucleoplasm
Cytoplasm
Cytosol
Plasma Membrane
Molecular Function
Nucleic Acid Binding
RNA Binding
MRNA Binding
Protein Binding
Ribosomal Large Subunit Binding
Exon-exon Junction Complex Binding
Transcription Coactivator Activity
Cysteine-type Deubiquitinase Activity
Protein Binding
Peptidase Activity
Cysteine-type Peptidase Activity
Hydrolase Activity
DeNEDDylase Activity
Metal Ion Binding
Biological Process
MRNA Processing
MRNA 3'-end Processing
Positive Regulation Of RNA Export From Nucleus
Protein Tetramerization
Protein Heterotetramerization
MRNA Alternative Polyadenylation
Co-transcriptional MRNA 3'-end Processing, Cleavage And Polyadenylation Pathway
Chromatin Organization
Proteolysis
Protein Deubiquitination
Ribosome Disassembly
Transcription Initiation-coupled Chromatin Remodeling
Positive Regulation Of DNA-templated Transcription
Rescue Of Stalled Ribosome
Pathways
Signaling by cytosolic FGFR1 fusion mutants
Signaling by FGFR1 in disease
TNFR1-induced proapoptotic signaling
Regulation of TNFR1 signaling
TNFR1-induced NF-kappa-B signaling pathway
Ub-specific processing proteases
Drugs
Diseases
GWAS
Height (
18391951
)
Medication use (agents acting on the renin-angiotensin system) (
31015401
)
Medication use (diuretics) (
31015401
)
Pneumoconiosis in silica exposure (
24986923
)
Smoking initiation (
33082346
)
Smoking initiation (ever regular vs never regular) (
30679032
)
Smoking status (ever vs never smokers) (
30643258
)
Interacting Genes
50 interacting genes:
APBB1
ARMC7
CEBPA
CSNK2A1
EWSR1
FOXP1
GIN1
ITCH
ITSN2
KLHL12
MIR10B
MIR128-1
MIR128-2
MIR138-2
MIR155
MIR17
MIR18B
MIR199A1
MIR19A
MIR19B1
MIR19B2
MIR25
MIR29A
MIR34A
MIR92A1
MIR93
MIRLET7A1
MIRLET7B
MIRLET7C
MIRLET7D
MIRLET7F2
NCK2
NEDD4
NUDT21
OGT
OTUB2
PLSCR1
PPIL1
PRPF40A
SRSF7
TOLLIP
UBAC1
UBQLN4
USP21
WBP4
WWOX
WWP1
WWP2
YES1
ZMYND19
65 interacting genes:
ADAMTSL4
ATXN3
AURKA
BAP1
BRCA2
CBL
CBLC
CDC34
CPSF6
DTX3
EFEMP2
ESPL1
EXOSC10
FOXD1
FOXM1
H2AC18
H2BC3
HOXC10
ISG15
JOSD1
KCTD9
KRT40
LRSAM1
MAPK3
MPP1
NANOG
OTUB1
OTUB2
PCGF6
RBCK1
RIPK1
RNF144A
RNF185
SENP3
SENP8
SLF1
STAMBP
SYNE1
TP53
TRAF6
TRIM23
TRIM5
TRIM54
TRIM63
TRIM8
TRIM9
UBC
UBE2D1
UBE2S
UCHL1
UCHL3
USP14
USP15
USP2
USP20
USP28
USP33
USP4
USP51
USP7
USP8
WDR47
YOD1
YY1
ZNF350
Entrez ID
11052
27005
HPRD ID
05401
05291
Ensembl ID
ENSG00000111605
ENSG00000143258
Uniprot IDs
Q16630
Q9UK80
PDB IDs
3P5T
3P6Y
3Q2S
3Q2T
4B4N
4U0A
4U0B
4WYM
6AY9
6GX9
7SNQ
7ZUD
8CL1
8EJL
8GDV
9CNV
2Y5B
3I3T
3MTN
Enriched GO Terms of Interacting Partners
?
RISC Complex
MiRNA-mediated Post-transcriptional Gene Silencing
Regulatory NcRNA-mediated Post-transcriptional Gene Silencing
Post-transcriptional Gene Silencing
MRNA Base-pairing Post-transcriptional Repressor Activity
Regulatory NcRNA-mediated Gene Silencing
Post-transcriptional Regulation Of Gene Expression
Negative Regulation Of Gene Expression
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Biosynthetic Process
Extracellular Vesicle
Negative Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Metabolic Process
MRNA 3'-UTR Binding
Regulation Of Gene Expression
MiRNA-mediated Gene Silencing By MRNA Destabilization
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Macromolecule Metabolic Process
MiRNA-mediated Gene Silencing By Inhibition Of Translation
Regulation Of Metabolic Process
Negative Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
Negative Regulation Of Cell Migration
Negative Regulation Of Translation
Negative Regulation Of Cell Motility
Negative Regulation Of Signal Transduction
Negative Regulation Of Locomotion
MRNA Destabilization
Negative Regulation Of Cell Communication
Negative Regulation Of Signaling
Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
RNA Destabilization
Negative Regulation Of Transmembrane Receptor Protein Serine/threonine Kinase Signaling Pathway
Positive Regulation Of MRNA Catabolic Process
Negative Regulation Of Cytokine Production
Regulation Of Cellular Response To Growth Factor Stimulus
Regulation Of Cardiac Muscle Hypertrophy
Negative Regulation Of Cholesterol Efflux
Negative Regulation Of Vascular Endothelial Growth Factor Production
Regulation Of Endothelial Cell Migration
Negative Regulation Of Multicellular Organismal Process
Positive Regulation Of MRNA Metabolic Process
Regulation Of Translation
Regulation Of Cell Growth Involved In Cardiac Muscle Cell Development
Negative Regulation Of Developmental Process
Positive Regulation Of Macromolecule Metabolic Process
Regulation Of Cardiac Muscle Cell Apoptotic Process
Negative Regulation Of Transport
Negative Regulation Of Cholesterol Transport
Negative Regulation Of Blood Vessel Endothelial Cell Migration
Negative Regulation Of Matrix Metallopeptidase Secretion
Post-translational Protein Modification
Protein Modification By Small Protein Removal
Protein Modification Process
Protein Deubiquitination
Cysteine-type Deubiquitinase Activity
Cysteine-type Peptidase Activity
Proteolysis
Protein Metabolic Process
Peptidase Activity
Macromolecule Metabolic Process
Protein K48-linked Deubiquitination
Protein Modification By Small Protein Conjugation
Protein Ubiquitination
Deubiquitinase Activity
Modification-dependent Protein Catabolic Process
Proteolysis Involved In Protein Catabolic Process
Macromolecule Catabolic Process
Cysteine-type Endopeptidase Activity
Ubiquitin Protein Ligase Activity
Protein K63-linked Deubiquitination
Ubiquitin-protein Transferase Activity
Ubiquitin-dependent Protein Catabolic Process
Catabolic Process
Protein Catabolic Process
K63-linked Deubiquitinase Activity
K48-linked Deubiquitinase Activity
Protein Polyubiquitination
Hydrolase Activity
Ubiquitin Protein Ligase Binding
Monoubiquitinated Protein Deubiquitination
Regulation Of Cellular Response To Stress
Ubiquitin Binding
TORC1 Signaling
Negative Regulation Of TORC1 Signaling
Proteasomal Protein Catabolic Process
TOR Signaling
Response To Stress
Nucleoplasm
DeNEDDylase Activity
DNA Damage Response
Zinc Ion Binding
Negative Regulation Of TOR Signaling
Regulation Of Protein Stability
Proteasome-mediated Ubiquitin-dependent Protein Catabolic Process
Regulation Of TORC1 Signaling
Regulation Of Intracellular Signal Transduction
DNA Repair
Regulation Of Telomere Maintenance
Positive Regulation Of Autophagy
Negative Regulation Of Intracellular Signal Transduction
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