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IRF9 and HOXC9
Number of citations of the paper that reports this interaction (PubMedID
20211142
)
41
Data Source:
BioGRID
(two hybrid)
IRF9
HOXC9
Description
interferon regulatory factor 9
homeobox C9
Image
No pdb structure
GO Annotations
Cellular Component
Chromatin
Nucleus
Nucleoplasm
Cytoplasm
Cytosol
ISGF3 Complex
Chromatin
Nucleus
Nucleoplasm
Aggresome
Transcription Repressor Complex
Molecular Function
Transcription Cis-regulatory Region Binding
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
DNA-binding Transcription Factor Activity, RNA Polymerase II-specific
DNA Binding
DNA-binding Transcription Factor Activity
Protein Binding
Sequence-specific Double-stranded DNA Binding
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
DNA-binding Transcription Factor Activity, RNA Polymerase II-specific
DNA Binding
DNA-binding Transcription Factor Activity
Protein Binding
Sequence-specific Double-stranded DNA Binding
Biological Process
Immune System Process
Regulation Of DNA-templated Transcription
Regulation Of Transcription By RNA Polymerase II
Transcription By RNA Polymerase II
Cell Surface Receptor Signaling Pathway
Positive Regulation Of Transcription By RNA Polymerase II
Defense Response To Virus
DNA-templated Transcription
Regulation Of DNA-templated Transcription
Regulation Of Transcription By RNA Polymerase II
Anterior/posterior Pattern Specification
Proximal/distal Pattern Formation
Negative Regulation Of Cell Cycle
Embryonic Skeletal System Morphogenesis
Embryonic Skeletal System Development
Pathways
Interferon gamma signaling
Interferon alpha/beta signaling
Drugs
Diseases
GWAS
A body shape index (
34021172
)
Heel bone mineral density (
30598549
)
Waist circumference adjusted for body mass index (
34021172
)
Waist-hip index (
34021172
)
Waist-to-hip ratio adjusted for BMI (
26426971
34021172
)
Waist-to-hip ratio adjusted for BMI (age <50) (
26426971
)
Waist-to-hip ratio adjusted for BMI (age >50) (
26426971
)
Waist-to-hip ratio adjusted for BMI x sex x age interaction (4df test) (
26426971
)
Interacting Genes
20 interacting genes:
ARID3B
DACH2
DMRTC2
HOXC9
IFNA1
ILF3
IRF1
IRF2BP1
MYO1F
NFKB1
NR2E3
POU2F1
RELA
S100A13
STAT1
STAT2
TLX2
TLX3
TOP1
VENTX
29 interacting genes:
CBX6
CYSRT1
ELAVL2
GMNN
GTF2A1L
HOXC13
HOXD1
HOXD9
IRF9
KRTAP6-2
LPXN
MAGED1
MSX2
NFKBID
NMI
PAX6
PAX8
PBX2
PCGF2
POLR2D
POLR3D
POU2AF1
POU2F1
SPMIP9
TLE5
UFSP1
ZFP36
ZMYND12
ZNF384
Entrez ID
10379
3225
HPRD ID
00960
00857
Ensembl ID
ENSG00000213928
ENSG00000180806
Uniprot IDs
A0A8V8TMJ8
A0A8V8TP83
H0YNP4
Q00978
P31274
PDB IDs
2LP0
2MSY
Enriched GO Terms of Interacting Partners
?
DNA Binding
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
DNA-binding Transcription Factor Activity, RNA Polymerase II-specific
DNA-binding Transcription Factor Activity
Sequence-specific DNA Binding
Regulation Of Gene Expression
Regulation Of Macromolecule Biosynthetic Process
Regulation Of RNA Metabolic Process
Regulation Of Transcription By RNA Polymerase II
Chromatin
Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Macromolecule Metabolic Process
Regulation Of Metabolic Process
Response To Virus
DNA-binding Transcription Activator Activity, RNA Polymerase II-specific
Nucleus
Positive Regulation Of Transcription By RNA Polymerase II
Regulation Of Primary Metabolic Process
Defense Response To Virus
Positive Regulation Of DNA-templated Transcription
Positive Regulation Of RNA Biosynthetic Process
NF-kappaB P50/p65 Complex
Interferon-mediated Signaling Pathway
RNA Polymerase II Core Promoter Sequence-specific DNA Binding
Positive Regulation Of RNA Metabolic Process
Nucleoplasm
ISGF3 Complex
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
Cytokine-mediated Signaling Pathway
Positive Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of RNA Biosynthetic Process
Positive Regulation Of Biosynthetic Process
Negative Regulation Of RNA Metabolic Process
Response To Peptide Hormone
Transcription Coactivator Binding
Type I Interferon-mediated Signaling Pathway
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Cellular Response To Nicotine
Tumor Necrosis Factor-mediated Signaling Pathway
Cellular Response To Peptide Hormone Stimulus
Regulation Of Interleukin-12 Production
Positive Regulation Of MiRNA Metabolic Process
Positive Regulation Of Macromolecule Metabolic Process
Response To Mechanical Stimulus
Actinin Binding
DNA-templated Transcription
Type II Interferon-mediated Signaling Pathway
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Regulation Of Gene Expression
Chromatin
Regulation Of Macromolecule Biosynthetic Process
Regulation Of RNA Metabolic Process
DNA Binding
Regionalization
Regulation Of Transcription By RNA Polymerase II
Regulation Of Nucleobase-containing Compound Metabolic Process
Nucleus
Regulation Of Macromolecule Metabolic Process
Pattern Specification Process
Sequence-specific Double-stranded DNA Binding
DNA-templated Transcription
Regulation Of Metabolic Process
Regulation Of Primary Metabolic Process
Anterior/posterior Pattern Specification
DNA-binding Transcription Factor Activity
Chromatin Binding
Animal Organ Morphogenesis
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of RNA Biosynthetic Process
DNA-binding Transcription Factor Activity, RNA Polymerase II-specific
Negative Regulation Of RNA Metabolic Process
Embryonic Morphogenesis
Transcription Cis-regulatory Region Binding
Positive Regulation Of RNA Metabolic Process
Embryonic Skeletal System Development
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Epithelial Cell Differentiation
Negative Regulation Of Transcription By RNA Polymerase II
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
Skeletal System Development
Positive Regulation Of DNA-templated Transcription
Positive Regulation Of RNA Biosynthetic Process
Embryonic Limb Morphogenesis
PRC1 Complex
Positive Regulation Of Branching Involved In Ureteric Bud Morphogenesis
Nucleobase-containing Compound Biosynthetic Process
Positive Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Macromolecule Biosynthetic Process
RNA Polymerase II Core Promoter Sequence-specific DNA Binding
Regulation Of Branching Involved In Ureteric Bud Morphogenesis
Negative Regulation Of Biosynthetic Process
Positive Regulation Of Biosynthetic Process
Limb Morphogenesis
Positive Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of Macromolecule Metabolic Process
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