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CCNK and CDK9
Number of citations of the paper that reports this interaction (PubMedID
36736316
)
80
Data Source:
BioGRID
(pull down, affinity chromatography technology)
HPRD
(in vitro, in vivo, two hybrid)
CCNK
CDK9
Description
cyclin K
cyclin dependent kinase 9
Image
GO Annotations
Cellular Component
Cyclin-dependent Protein Kinase Holoenzyme Complex
Cyclin K-CDK12 Complex
Cyclin K-CDK13 Complex
Nucleus
Nucleoplasm
Cyclin/CDK Positive Transcription Elongation Factor Complex
Nucleus
Nucleoplasm
Cytoplasm
Transcription Elongation Factor Complex
Cyclin/CDK Positive Transcription Elongation Factor Complex
Membrane
PML Body
Cytoplasmic Ribonucleoprotein Granule
P-TEFb Complex
Molecular Function
Cyclin-dependent Protein Serine/threonine Kinase Activity
Protein Binding
RNA Polymerase II CTD Heptapeptide Repeat Kinase Activity
Cyclin-dependent Protein Serine/threonine Kinase Regulator Activity
Protein Kinase Binding
Cyclin-dependent Protein Serine/threonine Kinase Activator Activity
Nucleotide Binding
Transcription Cis-regulatory Region Binding
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
Transcription Coactivator Binding
DNA Binding
Chromatin Binding
Transcription Elongation Factor Activity
Protein Kinase Activity
Protein Serine/threonine Kinase Activity
Cyclin-dependent Protein Serine/threonine Kinase Activity
Protein Binding
ATP Binding
RNA Polymerase II CTD Heptapeptide Repeat Kinase Activity
Kinase Activity
Transferase Activity
SnRNA Binding
Protein Kinase Binding
7SK SnRNA Binding
Protein Serine Kinase Activity
Biological Process
Regulation Of Cyclin-dependent Protein Serine/threonine Kinase Activity
Regulation Of Transcription By RNA Polymerase II
Transcription By RNA Polymerase II
DNA Damage Response
Regulation Of Signal Transduction
Positive Regulation Of DNA-templated Transcription, Elongation
Positive Regulation Of Transcription Elongation By RNA Polymerase II
Host-mediated Suppression Of Viral Genome Replication
Positive Regulation Of Transcription By RNA Polymerase II
Cell Division
Regulation Of Cell Cycle
DNA Repair
Regulation Of DNA Repair
Transcription By RNA Polymerase II
Transcription Initiation At RNA Polymerase II Promoter
Transcription Elongation By RNA Polymerase II
Protein Phosphorylation
DNA Damage Response
Regulation Of Mitotic Cell Cycle
Cell Population Proliferation
Replication Fork Processing
Regulation Of MRNA 3'-end Processing
Positive Regulation Of Transcription Elongation By RNA Polymerase II
Negative Regulation Of Transcription Elongation By RNA Polymerase II
Host-mediated Activation Of Viral Transcription
Positive Regulation Of Transcription By RNA Polymerase II
Regulation Of Muscle Cell Differentiation
Nucleus Localization
Regulation Of Cell Cycle
Cellular Response To Cytokine Stimulus
Negative Regulation Of Protein Localization To Chromatin
Positive Regulation Of Protein Localization To Chromatin
Transcription Elongation-coupled Chromatin Remodeling
Transcription Pausing By RNA Polymerase II
Pathways
Formation of RNA Pol II elongation complex
Formation of HIV elongation complex in the absence of HIV Tat
HIV elongation arrest and recovery
Pausing and recovery of HIV elongation
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
RNA Polymerase II Pre-transcription Events
TP53 Regulates Transcription of DNA Repair Genes
RNA polymerase II transcribes snRNA genes
RNA polymerase II transcribes snRNA genes
RNA Polymerase II Transcription Elongation
Formation of RNA Pol II elongation complex
Formation of HIV elongation complex in the absence of HIV Tat
Formation of HIV-1 elongation complex containing HIV-1 Tat
Formation of HIV-1 elongation complex containing HIV-1 Tat
Pausing and recovery of Tat-mediated HIV elongation
Tat-mediated HIV elongation arrest and recovery
Tat-mediated elongation of the HIV-1 transcript
HIV elongation arrest and recovery
Pausing and recovery of HIV elongation
Interactions of Tat with host cellular proteins
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
RNA Polymerase II Pre-transcription Events
TP53 Regulates Transcription of DNA Repair Genes
RNA polymerase II transcribes snRNA genes
RNA polymerase II transcribes snRNA genes
RNA Polymerase II Transcription Elongation
Estrogen-dependent gene expression
Drugs
Alvocidib
Seliciclib
Trilaciclib
Zotiraciclib
Diseases
GWAS
Scalp hair shape (
26926045
)
Systolic blood pressure x smoking status (current vs non-current) interaction (2df test) (
29455858
)
Systolic blood pressure x smoking status (ever vs never) interaction (2df test) (
29455858
)
Body mass index (
26426971
)
Interacting Genes
54 interacting genes:
ATXN1
BHLHE40
CCDC85B
CDK18
CDK2
CDK9
CEP76
CYSRT1
DDB1
DDIT4L
DVL3
EFEMP2
FAM168B
FKBP6
HIVEP1
HMG20A
HNRNPH1
HNRNPH2
HOMEZ
HOXA1
HSFY1
HSFY2
KCNRG
KRTAP13-2
KRTAP19-6
KRTAP19-7
KRTAP4-12
KRTAP6-2
KRTAP8-1
LZTS2
MYCL
NDC80
NECAB2
OXER1
PIN1
POLR1C
POLR2A
POU6F2
PRR20A
PRR20B
PRR20C
PRR20D
PRR20E
RBPMS
RBX1
RFX6
RHOXF2
RUNX1
STX11
TLE5
TSC22D4
USHBP1
USP54
ZNF446
60 interacting genes:
ACTL6A
AFF4
AR
BCL10
CASK
CCNK
CCNT1
CCNT2
CDC34
CDC7
CDK5R1
CEBPA
CTDP1
CTDSPL
CUL1
DHX30
EAF1
EEF1D
FBXO25
GRN
GTF2F1
H2BC21
HEXIM1
HEXIM2
HLTF
HSPA1A
HTATSF1
IL6ST
LBX2
MBP
MDFIC
MED21
MYBL2
NBN
NFKB1
NR2E3
OGT
PIN1
POLR2A
RB1
RCHY1
RELA
RMND5B
RN7SK
SERPINH1
SKP1
SKP2
SMAD1
SMAD2
SMAD3
STAT3
STK36
STUB1
SUPT5H
TAF7
TARBP2
TP53
TRAF2
UBE2A
ZMYM6
Entrez ID
8812
1025
HPRD ID
10352
16016
Ensembl ID
ENSG00000090061
ENSG00000136807
Uniprot IDs
O75909
P50750
PDB IDs
2I53
4CXA
4NST
4UN0
5ACB
5EFQ
6B3E
6CKX
6TD3
7NXJ
7NXK
8BU1
8BU2
8BU3
8BU4
8BU5
8BU6
8BU7
8BU9
8BUA
8BUB
8BUC
8BUD
8BUE
8BUF
8BUG
8BUH
8BUI
8BUJ
8BUK
8BUL
8BUM
8BUN
8BUO
8BUP
8BUQ
8BUR
8BUS
8BUT
8P81
9FMR
3BLH
3BLQ
3BLR
3LQ5
3MI9
3MIA
3MY1
3TN8
3TNH
3TNI
4BCF
4BCG
4BCH
4BCI
4BCJ
4EC8
4EC9
4IMY
4OGR
4OR5
5L1Z
6CYT
6GZH
6W9E
6Z45
7NWK
8I0L
8K5R
Enriched GO Terms of Interacting Partners
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Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Regulation Of Transcription By RNA Polymerase II
Intermediate Filament
Regulation Of RNA Metabolic Process
DNA Binding
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Gene Expression
Chromatin
DNA-binding Transcription Factor Activity, RNA Polymerase II-specific
Cyclin-dependent Protein Serine/threonine Kinase Activity
Base-excision Repair, AP Site Formation Via Deaminated Base Removal
Cul4B-RING E3 Ubiquitin Ligase Complex
Regulation Of Nucleobase-containing Compound Metabolic Process
Protein Binding
Identical Protein Binding
Regulation Of Primary Metabolic Process
Transcription Elongation By RNA Polymerase II
Spindle Assembly Involved In Female Meiosis
DNA-templated Transcription Elongation
Regulation Of Macromolecule Metabolic Process
Cul4A-RING E3 Ubiquitin Ligase Complex
Nucleoplasm
Nucleus
Positive Regulation Of Metabolic Process
Positive Regulation Of Macromolecule Metabolic Process
Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of DNA-templated Transcription
Regulation Of Primary Metabolic Process
Regulation Of Macromolecule Metabolic Process
Regulation Of RNA Biosynthetic Process
Regulation Of Metabolic Process
Regulation Of RNA Metabolic Process
Macromolecule Metabolic Process
Positive Regulation Of Macromolecule Biosynthetic Process
Positive Regulation Of Biosynthetic Process
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
DNA-templated Transcription
Regulation Of Gene Expression
Positive Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of RNA Biosynthetic Process
Positive Regulation Of DNA-templated Transcription
Ubiquitin Protein Ligase Binding
Regulation Of Macromolecule Biosynthetic Process
Nucleic Acid Metabolic Process
Nucleobase-containing Compound Biosynthetic Process
Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of RNA Metabolic Process
DNA-binding Transcription Factor Binding
Regulation Of Transcription Elongation By RNA Polymerase II
Regulation Of DNA-templated Transcription Elongation
Nucleobase-containing Compound Metabolic Process
Macromolecule Biosynthetic Process
Transcription By RNA Polymerase II
Regulation Of Protein Modification Process
Transcription Regulator Complex
Positive Regulation Of MiRNA Metabolic Process
RNA Metabolic Process
Cyclin/CDK Positive Transcription Elongation Factor Complex
7SK SnRNA Binding
Regulation Of Protein Metabolic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Transcription Coactivator Binding
Regulation Of MiRNA Metabolic Process
Negative Regulation Of RNA Metabolic Process
Protein-containing Complex
Negative Regulation Of DNA-templated Transcription
Positive Regulation Of MiRNA Transcription
Negative Regulation Of RNA Biosynthetic Process
Protein Polyubiquitination
Positive Regulation Of Transcription Elongation By RNA Polymerase II
Intracellular Signal Transduction
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