SSRP1 and EXOSC10

Number of citations: 47 (PubMedID 15231747)
Data Source: BioGRID (two hybrid), HPRD (two hybrid)

		SSRP1	EXOSC10
Name		structure specific recognition protein 1	exosome component 10
Structure
GO Annotations	Cellular Component	Nucleus Nucleoplasm Chromosome Nucleolus FACT Complex	Nuclear Exosome (RNase Complex) Cytoplasmic Exosome (RNase Complex) Exosome (RNase Complex) Euchromatin Nucleus Nucleoplasm Nucleolus Cytoplasm Cytosol Membrane Small-subunit Processome Nucleolar Exosome (RNase Complex)
	Molecular Function	DNA Binding Chromatin Binding RNA Binding Protein Binding Nucleosome Binding Histone Binding	Nucleotide Binding 3'-5'-RNA Exonuclease Activity Nucleic Acid Binding RNA Binding Single-stranded RNA Binding Nuclease Activity Exonuclease Activity RNA Exonuclease Activity Protein Binding 3'-5' Exonuclease Activity Hydrolase Activity Metal Ion Binding Telomerase RNA Binding
	Biological Process	DNA Replication DNA Repair Nucleosome Assembly Nucleosome Disassembly DNA Damage Response Regulation Of Chromatin Organization	Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay Maturation Of 5.8S RRNA Exonucleolytic Trimming To Generate Mature 3'-end Of 5.8S RRNA From Tricistronic RRNA Transcript (SSU-rRNA, 5.8S RRNA, LSU-rRNA) Nuclear-transcribed MRNA Catabolic Process Nucleobase-containing Compound Metabolic Process DNA Repair RRNA Processing RNA Processing RNA Catabolic Process DNA Damage Response Regulation Of Gene Expression Regulation Of Nucleobase-containing Compound Metabolic Process Negative Regulation Of Telomere Maintenance Via Telomerase Ribosomal Small Subunit Biogenesis Nuclear MRNA Surveillance CUT Catabolic Process Nuclear Polyadenylation-dependent RRNA Catabolic Process Nuclear Polyadenylation-dependent SnoRNA Catabolic Process Nuclear Polyadenylation-dependent SnRNA Catabolic Process TRAMP-dependent TRNA Surveillance Pathway Nuclear Polyadenylation-dependent CUT Catabolic Process Nuclear Polyadenylation-dependent Antisense Transcript Catabolic Process Histone MRNA Catabolic Process Poly(A)-dependent SnoRNA 3'-end Processing Regulation Of Telomerase RNA Localization To Cajal Body Positive Regulation Of MRNA Cis Splicing, Via Spliceosome
Pathways		Formation of RNA Pol II elongation complex Formation of HIV elongation complex in the absence of HIV Tat Formation of HIV-1 elongation complex containing HIV-1 Tat Pausing and recovery of Tat-mediated HIV elongation Tat-mediated HIV elongation arrest and recovery Tat-mediated elongation of the HIV-1 transcript HIV elongation arrest and recovery Pausing and recovery of HIV elongation RNA Polymerase II Pre-transcription Events TP53 Regulates Transcription of DNA Repair Genes Regulation of TP53 Activity through Phosphorylation RNA Polymerase II Transcription Elongation	Major pathway of rRNA processing in the nucleolus and cytosol Nuclear RNA decay
GWAS		No GWAS studies recorded	Beard thickness ( 26926045 ) Heel bone mineral density ( 30598549 ) Intraocular pressure ( 29617998 )
Interacting Genes		19 interacting genes: AURKA CEBPA CHD1 CHMP1B CSNK2A1 DHX9 EXOSC10 H3-3A MCM4 MYCBP NEK9 PTEN RAN ROBO2 SPI1 SREK1 SRF SUMO2 UBE2I	40 interacting genes: ALDH1B1 B9D1 CEBPA CHPF CIB1 DIS3 DXO EIF3M EXOSC4 EXOSC5 EXOSC6 EXOSC7 EXOSC8 FERMT3 FOXRED1 IMMT LCAT LSM2 LSM8 MPHOSPH6 NOMO1 NOMO2 PALS2 PTGES2 RPE RUVBL2 SCRIB SKIC2 SSRP1 SUMO2 TARDBP TOX4 TTN UPF2 USP16 USP21 USP36 USP7 XRN1 XRN2
Entrez ID		6749	5394
HPRD ID		05061	16180
Ensembl ID		ENSG00000149136	ENSG00000171824
Uniprot IDs		Q08945	Q01780
PDB IDs		4IFS 5UMR 5UMS 5VWE 6L1E 6L1R 6L34 6UPK 6UPL 9EH2	2CPR 3SAF 3SAG 3SAH 6D6Q 6D6R 7MQA
GO Terms Enriched among Interactors		Nucleoplasm Regulation Of Ubiquitin-dependent Protein Catabolic Process Nucleus Positive Regulation Of Ubiquitin-dependent Protein Catabolic Process PML Body Regulation Of Proteasomal Ubiquitin-dependent Protein Catabolic Process Positive Regulation Of Proteolysis Involved In Protein Catabolic Process RNA Polymerase II-specific DNA-binding Transcription Factor Binding Regulation Of Proteolysis Nucleotide Binding Importin-alpha Family Protein Binding Membrane Assembly Positive Regulation Of Proteolysis Regulation Of Proteasomal Protein Catabolic Process STAT Family Protein Binding Positive Regulation Of Protein Catabolic Process Spindle Assembly Involved In Female Meiosis Positive Regulation Of Proteasomal Ubiquitin-dependent Protein Catabolic Process Cell Division Nuclear Pore Chromatin DNA Binding Meiotic Spindle Assembly Chromatin Binding Negative Regulation Of Macromolecule Metabolic Process Interleukin-6-mediated Signaling Pathway Positive Regulation Of Protein Metabolic Process Regulation Of Cell Development Membraneless Organelle Assembly SUMO Transferase Activity Negative Regulation Of Macromolecule Biosynthetic Process Negative Regulation Of Metabolic Process Positive Regulation Of Proteasomal Protein Catabolic Process Meiotic Spindle Organization Positive Regulation Of Catabolic Process Macromolecule Metabolic Process Negative Regulation Of Biosynthetic Process Nuclear Membrane Reassembly Histone Deacetylase Binding Positive Regulation Of RNA Metabolic Process Osteoblast Differentiation Presynaptic Cytosol Granulocyte Differentiation Protein Heterodimerization Activity ATP Binding Mitotic Cell Cycle Postsynaptic Cytosol Regulation Of Axonogenesis Viral Process Regulation Of Nucleobase-containing Compound Metabolic Process Regulation Of Protein Catabolic Process	Nuclear MRNA Surveillance MRNA Catabolic Process Nuclear-transcribed MRNA Catabolic Process Nuclear Exosome (RNase Complex) RRNA Catabolic Process Exosome (RNase Complex) Nuclear RNA Surveillance RNA Catabolic Process RNA Surveillance Cytoplasmic Exosome (RNase Complex) U4 SnRNA 3'-end Processing Nucleobase-containing Compound Catabolic Process Nucleolar Exosome (RNase Complex) MRNA Metabolic Process RNA Exonuclease Activity RNA Binding Nucleic Acid Metabolic Process Exoribonuclease Complex SnRNA 3'-end Processing RNA Metabolic Process RRNA Metabolic Process Nucleobase-containing Compound Metabolic Process 3'-5'-RNA Exonuclease Activity SnRNA Processing Negative Regulation Of Gene Expression RRNA Processing Macromolecule Metabolic Process SnRNA Metabolic Process Poly(A)-dependent SnoRNA 3'-end Processing RNA 3'-end Processing 5'-3' Exonuclease Activity Macromolecule Catabolic Process RNA Processing DNA Deamination Nucleoplasm Negative Regulation Of Macromolecule Biosynthetic Process Negative Regulation Of Metabolic Process Regulation Of Gene Expression Negative Regulation Of Biosynthetic Process Exonuclease Activity Negative Regulation Of Macromolecule Metabolic Process Regulation Of Macromolecule Biosynthetic Process Nucleolus Sno(s)RNA Metabolic Process U5 SnRNA 3'-end Processing U1 SnRNA 3'-end Processing 5'-3' RNA Exonuclease Activity MRNA 3'-UTR AU-rich Region Binding DNA Modification Cysteine-type Deubiquitinase Activity