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RAD9A and HDAC1
Number of citations of the paper that reports this interaction (PubMedID
10846170
)
0
Data Source:
HPRD
(in vivo, in vitro)
RAD9A
HDAC1
Description
RAD9 checkpoint clamp component A
histone deacetylase 1
Image
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Cytoplasm
Checkpoint Clamp Complex
Histone Deacetylase Complex
Chromatin
Heterochromatin
Nucleus
Nucleoplasm
Transcription Regulator Complex
Cytoplasm
Cytosol
NuRD Complex
Transcription Repressor Complex
Protein-containing Complex
Neuronal Cell Body
Sin3-type Complex
Molecular Function
Nuclease Activity
Exonuclease Activity
Protein Binding
Double-stranded DNA 3'-5' DNA Exonuclease Activity
3'-5' Exonuclease Activity
Hydrolase Activity
SH3 Domain Binding
Enzyme Binding
Protein Kinase Binding
Histone Deacetylase Binding
Transcription Cis-regulatory Region Binding
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
RNA Polymerase II Core Promoter Sequence-specific DNA Binding
Core Promoter Sequence-specific DNA Binding
Transcription Corepressor Binding
P53 Binding
DNA Binding
Chromatin Binding
Transcription Corepressor Activity
Histone Deacetylase Activity
Protein Binding
Hydrolase Activity
Hydrolase Activity, Acting On Carbon-nitrogen (but Not Peptide) Bonds, In Linear Amides
Enzyme Binding
Nucleosomal DNA Binding
Protein Lysine Deacetylase Activity
Krueppel-associated Box Domain Binding
Histone Deacetylase Binding
Metal Ion Binding
NF-kappaB Binding
RNA Polymerase II-specific DNA-binding Transcription Factor Binding
E-box Binding
DNA-binding Transcription Factor Binding
Histone Deacetylase Activity, Hydrolytic Mechanism
Protein Decrotonylase Activity
Histone Decrotonylase Activity
Protein Lysine Delactylase Activity
Promoter-specific Chromatin Binding
Biological Process
DNA Replication Checkpoint Signaling
DNA Damage Checkpoint Signaling
DNA Repair
DNA Damage Response
Intrinsic Apoptotic Signaling Pathway In Response To DNA Damage
Mitotic Intra-S DNA Damage Checkpoint Signaling
Cellular Response To Ionizing Radiation
Positive Regulation Of Intrinsic Apoptotic Signaling Pathway In Response To DNA Damage
Negative Regulation Of Transcription By RNA Polymerase II
Chromatin Organization
Chromatin Remodeling
DNA Methylation-dependent Constitutive Heterochromatin Formation
Regulation Of Transcription By RNA Polymerase II
Protein Deacetylation
Endoderm Development
Circadian Rhythm
Positive Regulation Of Cell Population Proliferation
Epidermal Cell Differentiation
Positive Regulation Of Gene Expression
Negative Regulation Of Gene Expression
Negative Regulation Of Myotube Differentiation
Hippocampus Development
Neuron Differentiation
Negative Regulation Of Cell Migration
Negative Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
Heterochromatin Formation
Circadian Regulation Of Gene Expression
Positive Regulation Of Intracellular Estrogen Receptor Signaling Pathway
Cellular Response To Platelet-derived Growth Factor Stimulus
Odontogenesis Of Dentin-containing Tooth
Regulation Of Cell Fate Specification
Embryonic Digit Morphogenesis
Negative Regulation Of Apoptotic Process
Negative Regulation Of Canonical NF-kappaB Signal Transduction
Host-mediated Suppression Of Viral Transcription
Negative Regulation Of Gene Expression, Epigenetic
Negative Regulation Of DNA-templated Transcription
Positive Regulation Of DNA-templated Transcription
Positive Regulation Of Transcription By RNA Polymerase II
Rhythmic Process
Positive Regulation Of Smooth Muscle Cell Proliferation
Oligodendrocyte Differentiation
Positive Regulation Of Oligodendrocyte Differentiation
Negative Regulation Of Androgen Receptor Signaling Pathway
Hair Follicle Placode Formation
Eyelid Development In Camera-type Eye
Fungiform Papilla Formation
Negative Regulation Of Canonical Wnt Signaling Pathway
Negative Regulation Of Stem Cell Population Maintenance
Positive Regulation Of Stem Cell Population Maintenance
Regulation Of Stem Cell Differentiation
Negative Regulation Of Intrinsic Apoptotic Signaling Pathway
Pathways
Activation of ATR in response to replication stress
HDR through Single Strand Annealing (SSA)
Processing of DNA double-strand break ends
Presynaptic phase of homologous DNA pairing and strand exchange
Regulation of TP53 Activity through Phosphorylation
G2/M DNA damage checkpoint
Impaired BRCA2 binding to RAD51
Transcription of E2F targets under negative control by DREAM complex
Transcription of E2F targets under negative control by p107 (RBL1) and p130 (RBL2) in complex with HDAC1
G0 and Early G1
p75NTR negatively regulates cell cycle via SC1
Formation of the beta-catenin:TCF transactivating complex
NOTCH1 Intracellular Domain Regulates Transcription
Downregulation of SMAD2/3:SMAD4 transcriptional activity
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
Constitutive Signaling by NOTCH1 PEST Domain Mutants
Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants
HDACs deacetylate histones
Notch-HLH transcription pathway
Deactivation of the beta-catenin transactivating complex
ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression
NoRC negatively regulates rRNA expression
SUMOylation of chromatin organization proteins
Repression of WNT target genes
Repression of WNT target genes
Regulation of TP53 Activity through Acetylation
G1/S-Specific Transcription
RNA Polymerase I Transcription Initiation
RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function
Regulation of PTEN gene transcription
Regulation of PTEN gene transcription
Estrogen-dependent gene expression
Loss of MECP2 binding ability to 5mC-DNA
Regulation of MECP2 expression and activity
MECP2 regulates neuronal receptors and channels
MECP2 regulates transcription of neuronal ligands
FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes
Potential therapeutics for SARS
STAT3 nuclear events downstream of ALK signaling
Nuclear events stimulated by ALK signaling in cancer
Negative Regulation of CDH1 Gene Transcription
Regulation of MITF-M-dependent genes involved in apoptosis
Regulation of MITF-M-dependent genes involved in cell cycle and proliferation
Factors involved in megakaryocyte development and platelet production
Regulation of endogenous retroelements by KRAB-ZFP proteins
Transcriptional regulation of brown and beige adipocyte differentiation by EBF2
Regulation of endogenous retroelements by Piwi-interacting RNAs (piRNAs)
Transcriptional and post-translational regulation of MITF-M expression and activity
Drugs
Valproic acid
Arsenic trioxide
Decitabine
Zinc
Vorinostat
Vorinostat
Belinostat
Pracinostat
Romidepsin
Romidepsin
Panobinostat
Phenylbutyric acid
Fingolimod
Mocetinostat
Entinostat
Abexinostat
Abexinostat
Givinostat
Pyroxamide
Zinc acetate
Zinc chloride
Zinc sulfate, unspecified form
Diseases
GWAS
Body fat distribution (arm fat ratio) (
30664634
)
Body fat distribution (leg fat ratio) (
30664634
)
Body fat distribution (trunk fat ratio) (
30664634
)
Interacting Genes
39 interacting genes:
ABL1
AR
ATAD5
ATM
BCL2
BCL2L1
CAD
CDK1
CHEK2
CLSPN
COPS5
CSNK2A1
CSNK2A2
DNAJC7
FEM1B
FEN1
HDAC1
HUS1
HUS1B
ITSN2
MLH1
MSH2
MSH3
MSH6
NR3C1
OGG1
PCNA
POLB
PRKCE
RAD17
RAD9B
RHNO1
RPA1
RPA2
SF3B3
TDG
TLK1
TOPBP1
WRN
187 interacting genes:
APEX1
AR
ARID4A
ATF3
ATRX
BAZ2A
BCL3
BCL6
BCL6B
BCOR
BHLHE40
BRCA1
BRMS1
BRMS1L
BUB1
BUB1B
BUB3
CBFA2T3
CCN5
CDC20
CDH1
CDKN1A
CDYL
CEBPA
CHD1
CHD4
CHFR
CIITA
CREBBP
CREM
CSNK2A1
CSNK2A2
CTBP1
CYTOR
DAXX
DDB2
DDX17
DHX30
DNMT1
DNMT3A
DNMT3B
DNMT3L
EED
EID2
EID2B
ELK1
ENO1
EP300
ERCC6
EZH2
FKBP3
FOXG1
FRA10F
GCM1
GPS2
H2AC1
H3-4
H3C1
HBP1
HDAC2
HDAC3
HDAC7
HDAC9
HELLS
HEY2
HIC1
HIF1A
HIF1AN
HMGB1
HNRNPD
HR
HUS1
IKZF1
ING1
IRF5
JDP2
JUP
KAT5
KCTD11
KDM1A
KLF1
KLF11
KLF4
KLF5
LCOR
MAD1L1
MAGEA1
MBD2
MBD3
MBD4
MDM2
MECOM
MIER1
MORF4L2
MTA1
MXD1
MYOD1
NCOR2
NFE4
NFKB1
NFKBIA
NKX2-5
NKX3-2
NR1D2
NR2E3
NR2F2
NR3C1
NRIP1
NUP98
PARP1
PCNA
PEX14
PHB1
PHB2
PHF12
PHF21A
PIAS3
PIAS4
PITX2
PML
PPARD
PPARG
PPP2R1B
PRKACA
PRKG1
PRRG4
PTMA
PTOV1
RAD9A
RAP1A
RARA
RB1
RBBP4
RBBP7
RBL1
RBL2
RBP1
RBPJ
RELA
REPIN1
RFC1
RFC4
RUNX1T1
RUNX3
RUVBL2
SALL1
SAP18
SAP30
SATB1
SATB2
SENP1
SERPINB5
SETDB1
SIN3A
SIN3B
SMAD2
SOX6
SP1
SP3
SPEN
SPI1
STAT2
STAT3
SUDS3
SUMO2
SUV39H1
SYK
TAB2
TAL1
TFCP2
TGIF1
TGIF2
THAP11
TOP2A
TOP2B
TP53
TPD52L1
TRIM27
TXNIP
UBC
UBE2I
USP38
USP43
VHL
ZBTB16
ZMYND11
ZNF76
Entrez ID
5883
3065
HPRD ID
04788
03143
Ensembl ID
ENSG00000172613
ENSG00000116478
Uniprot IDs
Q99638
Q13547
Q6IT96
PDB IDs
3A1J
3G65
3GGR
6HM5
6J8Y
7Z6H
8GNN
8JZY
8WU8
4BKX
5ICN
6Z2J
6Z2K
7AO8
7AO9
7AOA
7SME
8VOJ
8VPQ
8VRT
Enriched GO Terms of Interacting Partners
?
DNA Damage Response
DNA Repair
DNA Metabolic Process
Cellular Response To Stress
Signal Transduction In Response To DNA Damage
DNA Damage Checkpoint Signaling
DNA Recombination
Double-strand Break Repair
Mitotic DNA Damage Checkpoint Signaling
Nucleic Acid Metabolic Process
Mitotic DNA Integrity Checkpoint Signaling
Mismatch Repair
Response To Stress
Regulation Of Cell Cycle Process
Regulation Of Cell Cycle
Negative Regulation Of Cell Cycle Phase Transition
Nucleobase-containing Compound Metabolic Process
Chromosome Organization
Negative Regulation Of Cell Cycle
Negative Regulation Of Cell Cycle Process
Negative Regulation Of Mitotic Cell Cycle
Regulation Of Cell Cycle Phase Transition
Intrinsic Apoptotic Signaling Pathway In Response To DNA Damage
Macromolecule Metabolic Process
Nucleoplasm
Intracellular Signal Transduction
Response To Ionizing Radiation
Response To Radiation
Damaged DNA Binding
Nucleus
Regulation Of DNA Metabolic Process
Protein Localization To Site Of Double-strand Break
Recombinational Repair
Mitotic Intra-S DNA Damage Checkpoint Signaling
Base-excision Repair
Enzyme Binding
Regulation Of Mitotic Cell Cycle
DNA Replication Checkpoint Signaling
Intrinsic Apoptotic Signaling Pathway
Regulation Of Cellular Response To Stress
Chromosome, Telomeric Region
Somatic Cell DNA Recombination
Mitotic DNA Replication Checkpoint Signaling
Negative Regulation Of DNA Metabolic Process
Double-strand Break Repair Via Homologous Recombination
Negative Regulation Of DNA Recombination
Mismatched DNA Binding
Regulation Of DNA Recombination
Guanine/thymine Mispair Binding
Mitotic G2/M Transition Checkpoint
Negative Regulation Of RNA Biosynthetic Process
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of RNA Metabolic Process
Regulation Of RNA Biosynthetic Process
Negative Regulation Of Biosynthetic Process
Regulation Of DNA-templated Transcription
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Transcription By RNA Polymerase II
Regulation Of Transcription By RNA Polymerase II
Regulation Of RNA Metabolic Process
Negative Regulation Of Metabolic Process
Negative Regulation Of Macromolecule Metabolic Process
Regulation Of Nucleobase-containing Compound Metabolic Process
Nucleoplasm
Nucleus
Regulation Of Primary Metabolic Process
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Macromolecule Metabolic Process
Regulation Of Gene Expression
Regulation Of Metabolic Process
DNA Binding
Transcription Corepressor Activity
Histone Deacetylase Binding
Chromatin
Chromatin Organization
Positive Regulation Of RNA Biosynthetic Process
Positive Regulation Of DNA-templated Transcription
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
Positive Regulation Of RNA Metabolic Process
Chromatin Binding
Positive Regulation Of Macromolecule Metabolic Process
Chromatin Remodeling
RNA Polymerase II-specific DNA-binding Transcription Factor Binding
Positive Regulation Of Macromolecule Biosynthetic Process
Positive Regulation Of Biosynthetic Process
Positive Regulation Of Metabolic Process
Positive Regulation Of Transcription By RNA Polymerase II
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
DNA-binding Transcription Factor Activity
Epigenetic Regulation Of Gene Expression
DNA-binding Transcription Factor Binding
Transcription Regulator Complex
Regulation Of Developmental Process
Regulation Of Cell Differentiation
Negative Regulation Of Gene Expression
Cell Differentiation
Negative Regulation Of Gene Expression, Epigenetic
Sin3-type Complex
Sequence-specific DNA Binding
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