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LSM2 and CLNS1A
Number of citations of the paper that reports this interaction (PMID
22365833
)
24
Data Source:
BioGRID
(two hybrid, two hybrid, two hybrid)
LSM2
CLNS1A
Gene Name
LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
chloride channel, nucleotide-sensitive, 1A
Image
No pdb structure
No pdb structure
Gene Ontology Annotations
Cellular Component
Nucleoplasm
Cytosol
Catalytic Step 2 Spliceosome
Nucleus
Nucleoplasm
Cytoplasm
Cytosol
Cytoskeleton
Plasma Membrane
Methylosome
PICln-Sm Protein Complex
Molecular Function
Protein Binding
U6 SnRNA Binding
Ral GTPase Binding
Protein Kinase Binding
Poly(A) RNA Binding
Protein Binding
Poly(A) RNA Binding
Biological Process
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
MRNA Splicing, Via Spliceosome
RNA Splicing
Gene Expression
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Spliceosomal SnRNP Assembly
Chloride Transport
Cell Volume Homeostasis
Gene Expression
NcRNA Metabolic Process
Pathways
Processing of Capped Intron-Containing Pre-mRNA
mRNA Splicing
mRNA Splicing - Minor Pathway
mRNA Splicing - Major Pathway
mRNA decay by 5' to 3' exoribonuclease
Deadenylation-dependent mRNA decay
snRNP Assembly
Metabolism of non-coding RNA
Drugs
Diseases
GWAS
Protein-Protein Interactions
31 interactors:
AES
BANP
C14orf1
CLNS1A
CRMP1
DDX20
DNAJA1
EXOSC10
GBP2
KRT13
LNX1
LSM1
LSM3
LSM5
LSM6
LSM7
LSM8
MAGEA6
MEOX2
PRCC
RALA
REL
RSRC1
SF3B2
SMN1
SNRPB
SNRPD2
SNRPE
TRIM54
ZBTB16
ZNF408
18 interactors:
ACTB
CSNK2A1
EIF4A2
EPB41
EPB41L3
ITGA2B
LSM10
LSM2
LSM3
LSM6
PRMT5
SNRPB
SNRPD1
SNRPD2
SNRPD3
SNRPE
SNRPF
SNRPG
Entrez ID
57819
1207
HPRD ID
06282
03694
Ensembl ID
ENSG00000204392
ENSG00000074201
Uniprot IDs
Q9Y333
E9PJF4
P54105
PDB IDs
Enriched GO Terms of Interacting Partners
?
RNA Splicing
MRNA Metabolic Process
MRNA Processing
RNA Splicing, Via Transesterification Reactions
RNA Processing
MRNA Splicing, Via Spliceosome
RNA Metabolic Process
Spliceosomal SnRNP Assembly
Gene Expression
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic
Nucleobase-containing Compound Metabolic Process
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Cellular Nitrogen Compound Metabolic Process
Ribonucleoprotein Complex Biogenesis
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
Histone MRNA Metabolic Process
Nitrogen Compound Metabolic Process
Nuclear-transcribed MRNA Catabolic Process
MRNA Catabolic Process
Ribonucleoprotein Complex Assembly
RNA Catabolic Process
NcRNA Metabolic Process
Aromatic Compound Catabolic Process
Histone MRNA Catabolic Process
Spliceosomal Complex Assembly
Cellular Metabolic Process
Cellular Macromolecule Catabolic Process
Cellular Macromolecular Complex Assembly
Metabolic Process
Termination Of RNA Polymerase II Transcription
Nuclear Retention Of Unspliced Pre-mRNA At The Site Of Transcription
Catabolic Process
DNA-templated Transcription, Termination
Transcription From RNA Polymerase II Promoter
MRNA 3'-end Processing
Membrane Raft Localization
Positive Regulation Of Anoikis
Nuclear Polyadenylation-dependent RRNA Catabolic Process
CUT Catabolic Process
Embryonic Pattern Specification
Cellular Process
Positive Regulation Of Apoptotic Process
Positive Regulation Of NK T Cell Differentiation
Positive Regulation Of Programmed Cell Death
Transcription, DNA-templated
Positive Regulation Of Cell Death
Male Germ-line Stem Cell Asymmetric Division
Somite Specification
MRNA Processing
RNA Splicing
MRNA Splicing, Via Spliceosome
Spliceosomal SnRNP Assembly
RNA Splicing, Via Transesterification Reactions
MRNA Metabolic Process
RNA Processing
Histone MRNA Metabolic Process
MRNA 3'-end Processing
Termination Of RNA Polymerase II Transcription
Ribonucleoprotein Complex Assembly
Ribonucleoprotein Complex Biogenesis
RNA 3'-end Processing
DNA-templated Transcription, Termination
NcRNA Metabolic Process
RNA Metabolic Process
Gene Expression
Cellular Macromolecular Complex Assembly
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
Spliceosomal Complex Assembly
Nucleobase-containing Compound Metabolic Process
Cellular Component Assembly
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Cellular Nitrogen Compound Metabolic Process
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic
Nitrogen Compound Metabolic Process
Nuclear-transcribed MRNA Catabolic Process
MRNA Catabolic Process
RNA Catabolic Process
Transcription From RNA Polymerase II Promoter
Transcription, DNA-templated
Cortical Actin Cytoskeleton Organization
RNA Biosynthetic Process
Cortical Cytoskeleton Organization
Aromatic Compound Catabolic Process
Platelet Aggregation
Cellular Metabolic Process
Cellular Macromolecule Biosynthetic Process
Macromolecule Biosynthetic Process
Negative Regulation Of RNA-directed RNA Polymerase Activity
Neuron Projection Morphogenesis
Peptidyl-arginine Methylation, To Symmetrical-dimethyl Arginine
Neuron Projection Development
Axon Guidance
Cell Projection Morphogenesis
Cellular Macromolecule Catabolic Process
Cell Part Morphogenesis
Regulation Of Mitotic Cell Cycle
Tagcloud
?
angles
arrange
assemble
building
heptameric
heteroheptameric
hexameric
incorporate
lsm1
lsm23
lsm5
lsm57
lsm6
lsm657
lsm7
monomers
nonetheless
plastic
pockets
preferences
pull
ring
sme
smf
smg
solved
spliceosomal
Tagcloud (Difference)
?
angles
arrange
assemble
building
heptameric
heteroheptameric
hexameric
incorporate
lsm1
lsm23
lsm5
lsm57
lsm6
lsm657
lsm7
monomers
nonetheless
plastic
pockets
preferences
pull
ring
sme
smf
smg
solved
spliceosomal
Tagcloud (Intersection)
?