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LSM8 and LSM4
Number of citations of the paper that reports this interaction (PMID
15231747
)
44
Data Source:
BioGRID
(two hybrid)
LSM8
LSM4
Gene Name
LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
Image
No pdb structure
No pdb structure
Gene Ontology Annotations
Cellular Component
Spliceosomal Complex
U4/U6 X U5 Tri-snRNP Complex
Spliceosomal Complex
U6 SnRNP
Cytosol
Small Nuclear Ribonucleoprotein Complex
Molecular Function
Protein Binding
U6 SnRNA Binding
U6 SnRNA 3'-end Binding
Poly(A) RNA Binding
Protein Binding
Poly(A) RNA Binding
Biological Process
MRNA Splicing, Via Spliceosome
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
MRNA Processing
RNA Splicing
Gene Expression
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Pathways
mRNA decay by 5' to 3' exoribonuclease
Deadenylation-dependent mRNA decay
Drugs
Diseases
GWAS
Protein-Protein Interactions
49 interactors:
ARNT
BCKDK
COL23A1
DBF4
DCP1A
DCP1B
DPAGT1
ECHDC2
EFTUD2
EXOSC10
EXOSC6
FAM63A
FERMT3
GMPPA
GTF2I
HSPA9
IFNLR1
IGHMBP2
ISOC2
ITSN2
KCTD3
LSM2
LSM3
LSM4
LSM5
LSM6
LSM7
MGA
MPRIP
MRPL48
MTHFR
NAGK
NME4
PDCD2
PGD
PHF11
RBM5
RPL24
RSC1A1
RSL24D1
SEPT10
SEPT5
SMU1
SNRNP200
SNRPB
SNRPD1
TALDO1
THUMPD3
UPF1
20 interactors:
CALCOCO2
COX5B
IKZF1
L3MBTL3
LSM1
LSM7
LSM8
NMI
PLEKHA5
PSTPIP1
RHOXF2
SLC22A2
SMIM14
SMN1
SMU1
SNRPE
TOE1
TOP1
XRN1
ZBTB10
Entrez ID
51691
25804
HPRD ID
06288
06284
Ensembl ID
ENSG00000130520
Uniprot IDs
A4D0W0
O95777
Q9Y4Z0
U3KQK1
PDB IDs
Enriched GO Terms of Interacting Partners
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Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic
Nuclear-transcribed MRNA Catabolic Process
MRNA Metabolic Process
MRNA Catabolic Process
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
RNA Catabolic Process
Nucleobase-containing Compound Metabolic Process
Aromatic Compound Catabolic Process
RNA Splicing
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Cellular Nitrogen Compound Metabolic Process
Nitrogen Compound Metabolic Process
MRNA Processing
RNA Processing
Catabolic Process
Gene Expression
RNA Metabolic Process
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
Cellular Macromolecule Catabolic Process
Ribonucleoprotein Complex Biogenesis
Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay
Cellular Metabolic Process
Histone MRNA Metabolic Process
Pentose Biosynthetic Process
Metabolic Process
Histone MRNA Catabolic Process
Dosage Compensation By Inactivation Of X Chromosome
Spliceosomal Complex Assembly
Dosage Compensation
Ribonucleoprotein Complex Assembly
Ribosome Biogenesis
Pentose-phosphate Shunt
Glyceraldehyde-3-phosphate Metabolic Process
Nucleobase-containing Small Molecule Metabolic Process
Glucose 6-phosphate Metabolic Process
RRNA Processing
NcRNA Metabolic Process
Starch Catabolic Process
Nuclear Retention Of Unspliced Pre-mRNA At The Site Of Transcription
Response To Type III Interferon
Dolichol Biosynthetic Process
NADP Metabolic Process
RRNA Metabolic Process
Spliceosomal SnRNP Assembly
Carbohydrate Biosynthetic Process
D-gluconate Metabolic Process
Response To Vitamin B2
Histone MRNA Metabolic Process
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic
MRNA Metabolic Process
RNA Splicing
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
MRNA Processing
RNA Metabolic Process
Histone MRNA Catabolic Process
RNA Splicing, Via Transesterification Reactions
Gene Expression
RNA Processing
Nucleobase-containing Compound Metabolic Process
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Cellular Nitrogen Compound Metabolic Process
Nuclear-transcribed MRNA Catabolic Process
MRNA Catabolic Process
RNA Catabolic Process
Nitrogen Compound Metabolic Process
Spliceosomal SnRNP Assembly
MRNA Splicing, Via Spliceosome
Positive Regulation Of Neutrophil Differentiation
Spliceosomal Complex Assembly
Aromatic Compound Catabolic Process
NcRNA Metabolic Process
Cellular Metabolic Process
Nuclear MRNA Surveillance
Positive Regulation Of NK T Cell Differentiation
RNA Surveillance
Choline Transport
Deadenylation-dependent Decapping Of Nuclear-transcribed MRNA
Positive Regulation Of Granulocyte Differentiation
Ribonucleoprotein Complex Assembly
Chromatin Modification
RRNA Catabolic Process
Embryonic Cleavage
Erythrocyte Maturation
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Tagcloud (Difference)
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Tagcloud (Intersection)
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