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YBX1 and FMR1
Number of citations of the paper that reports this interaction (PubMedID
11162447
)
0
Data Source:
HPRD
(in vivo)
YBX1
FMR1
Description
Y-box binding protein 1
fragile X messenger ribonucleoprotein 1
Image
GO Annotations
Cellular Component
P-body
Extracellular Region
Nucleus
Nucleoplasm
U12-type Spliceosomal Complex
Cytoplasm
Endoplasmic Reticulum
Cytosol
Plasma Membrane
Cytoplasmic Stress Granule
Synapse
Extracellular Exosome
CRD-mediated MRNA Stability Complex
Histone Pre-mRNA 3'end Processing Complex
Ribonucleoprotein Complex
Chromosome, Centromeric Region
Nucleus
Nucleoplasm
Chromosome
Nucleolus
Cytoplasm
Cytosol
Plasma Membrane
Chromocenter
Cytoplasmic Stress Granule
Postsynaptic Density
Cajal Body
Membrane
Axon
Dendrite
Growth Cone
Filopodium Tip
SMN Complex
Cytoplasmic Ribonucleoprotein Granule
Presynaptic Membrane
Cell Projection
Neuron Projection
Dendritic Spine
Perikaryon
Intracellular Membraneless Organelle
Axon Terminus
Synapse
Postsynaptic Membrane
Perinuclear Region Of Cytoplasm
Neuronal Ribonucleoprotein Granule
Glial Cell Projection
Presynapse
Postsynapse
Dendritic Filopodium
Growth Cone Filopodium
Ribonucleoprotein Complex
Molecular Function
Nucleic Acid Binding
DNA Binding
Chromatin Binding
Double-stranded DNA Binding
Single-stranded DNA Binding
RNA Binding
MRNA Binding
Protein Binding
MiRNA Binding
GTPase Binding
C5-methylcytidine-containing RNA Reader Activity
Sequence-specific Double-stranded DNA Binding
G-quadruplex RNA Binding
Nucleic Acid Binding
Chromatin Binding
RNA Binding
MRNA Binding
MRNA 3'-UTR Binding
Protein Binding
Microtubule Binding
Poly(U) RNA Binding
Translation Repressor Activity
Translation Initiation Factor Binding
RNA Strand Annealing Activity
Poly(G) Binding
SiRNA Binding
MiRNA Binding
Signaling Adaptor Activity
RNA Stem-loop Binding
Identical Protein Binding
Protein Homodimerization Activity
Ribosome Binding
Transmembrane Transporter Binding
Protein-containing Complex Binding
Translation Regulator Activity
Protein Heterodimerization Activity
MRNA 5'-UTR Binding
Dynein Complex Binding
Histone H3 Reader Activity
Molecular Condensate Scaffold Activity
N6-methyladenosine-containing RNA Reader Activity
Sequence-specific MRNA Binding
Biological Process
Negative Regulation Of Transcription By RNA Polymerase II
In Utero Embryonic Development
Regulation Of DNA-templated Transcription
MRNA Processing
RNA Splicing
Epidermis Development
Regulation Of Gene Expression
Negative Regulation Of Translation
Positive Regulation Of Transcription By RNA Polymerase II
MRNA Stabilization
Embryonic Morphogenesis
RNA Transport
TRNA Transport
Negative Regulation Of Striated Muscle Cell Differentiation
Positive Regulation Of Cell Division
CRD-mediated MRNA Stabilization
Cellular Response To Interleukin-7
Negative Regulation Of Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
Protein Localization To Cytoplasmic Stress Granule
MiRNA Transport
Positive Regulation Of Cytoplasmic Translation
Negative Regulation Of Cellular Senescence
Deadenylation-dependent Decapping Of Nuclear-transcribed MRNA
Regulation Of Alternative MRNA Splicing, Via Spliceosome
Positive Regulation Of Receptor Internalization
DNA Repair
Chromatin Organization
MRNA Processing
MRNA Export From Nucleus
Regulation Of Translation
DNA Damage Response
Glutamate Receptor Signaling Pathway
Nervous System Development
RNA Splicing
Regulation Of Cell Communication
Negative Regulation Of Translation
Regulatory NcRNA-mediated Gene Silencing
Stress Granule Assembly
Regulation Of MRNA Stability
Host-mediated Perturbation Of Viral RNA Genome Replication
Positive Regulation Of Translation
Negative Regulation Of Translational Initiation
Regulation Of Neurotransmitter Secretion
Positive Regulation Of Long-term Neuronal Synaptic Plasticity
Animal Organ Development
MRNA Transport
Positive Regulation Of Cellular Component Organization
Regulation Of Filopodium Assembly
Positive Regulation Of Filopodium Assembly
Negative Regulation Of MiRNA-mediated Gene Silencing
Regulation Of Dendritic Spine Development
Positive Regulation Of Dendritic Spine Development
Regulation Of Biological Quality
Cellular Response To Virus
Regulation Of Neuronal Action Potential
Regulation Of Translation At Presynapse, Modulating Synaptic Transmission
Membraneless Organelle Assembly
Negative Regulation Of Long-term Synaptic Depression
Positive Regulation Of Intracellular Transport Of Viral Material
Negative Regulation Of Voltage-gated Calcium Channel Activity
Positive Regulation Of Proteasomal Protein Catabolic Process
Negative Regulation Of Synaptic Vesicle Exocytosis
Positive Regulation Of MiRNA-mediated Gene Silencing
Negative Regulation Of Cytoplasmic Translation
Pathways
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway
Processing of Capped Intron-Containing Pre-mRNA
Interferon gamma signaling
Noncanonical activation of NOTCH3
Drugs
Diseases
Premature ovarian failure
Fragile X Syndrome, including: Fragile X Syndrome (FXS); Fragile X tremor/ataxia syndrome (FXTAS)
GWAS
Antineutrophil cytoplasmic antibody-associated vasculitis (
22808956
)
Fragile X syndrome (
30531935
)
Interacting Genes
125 interacting genes:
ACTA2
AKT1
ANKRD2
APBB1
CALM1
CASP8
CEBPA
CSNK2A1
CTCF
DANCR
DUX4
FBXO33
FMR1
FUS
GSK3B
HABP4
HLA-C
HNRNPD
HNRNPK
HOXC-AS3
IL7R
IREB2
IRF1
JAM2
LCP2
LSM3
MAPK1
MIR1-1
MIR1-2
MIR106A
MIR106B
MIR107
MIR10B
MIR122
MIR128-1
MIR128-2
MIR138-1
MIR138-2
MIR140
MIR141
MIR143
MIR145
MIR155
MIR15A
MIR15B
MIR16-1
MIR16-2
MIR17
MIR18A
MIR18B
MIR199A1
MIR199A2
MIR19A
MIR19B1
MIR19B2
MIR200A
MIR200B
MIR200C
MIR205
MIR206
MIR20A
MIR20B
MIR21
MIR214
MIR221
MIR222
MIR25
MIR29A
MIR29B1
MIR29B2
MIR29C
MIR31
MIR34A
MIR34B
MIR34C
MIR363
MIR429
MIR451A
MIR7-1
MIR7-2
MIR7-3
MIR9-1
MIR9-2
MIR9-3
MIR92A1
MIR92A2
MIR93
MIR98
MIRLET7A1
MIRLET7A2
MIRLET7A3
MIRLET7B
MIRLET7C
MIRLET7D
MIRLET7E
MIRLET7F1
MIRLET7F2
MIRLET7G
MIRLET7I
MYC
MYCN
NEIL3
NFYB
OGT
PCBP2
PCNA
PFKFB4
PRPF40A
PURA
RBBP6
RNF10
RPS6KA1
RPS6KA3
SLC6A4
SMAD3
SMU1
SREK1
SRSF9
TFAP2A
TP53
TRAF6
VEGFA
VPS35
WEE2-AS1
ZBTB7A
49 interacting genes:
AKAP9
ALDOC
ATG5
BEX4
CALCOCO2
CAMK2B
CASK
CCAR2
CWC25
CYFIP1
CYFIP2
DCTPP1
DGKD
EFHC1
FSD2
FXR1
FXR2
GRIP2
H19
HOMER3
INCA1
LIMS1
MAGI3
MEOX1
MVP
NCL
NECAB2
NUFIP1
NUFIP2
PICK1
POLR1C
PPP1R12C
PSME3
RANBP9
RBM14
SF3B2
SFPQ
SHARPIN
SPAG5
STAU1
SUOX
TACC2
UBE2I
USP7
WEE2-AS1
YBX1
ZBTB42
ZFPM2
ZMYND8
Entrez ID
4904
2332
HPRD ID
01095
02398
Ensembl ID
ENSG00000065978
ENSG00000102081
Uniprot IDs
P67809
Q06787
PDB IDs
1H95
5YTS
5YTT
5YTV
5YTX
6A6L
6KTC
6KUG
6LMR
6LMS
2BKD
2FMR
2LA5
2QND
4OVA
4QVZ
4QW2
5DE5
5DE8
5DEA
5UWJ
5UWO
Enriched GO Terms of Interacting Partners
?
MiRNA-mediated Post-transcriptional Gene Silencing
RISC Complex
Regulatory NcRNA-mediated Post-transcriptional Gene Silencing
Post-transcriptional Gene Silencing
Regulatory NcRNA-mediated Gene Silencing
MRNA Base-pairing Post-transcriptional Repressor Activity
Post-transcriptional Regulation Of Gene Expression
Negative Regulation Of Gene Expression
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Biosynthetic Process
MRNA 3'-UTR Binding
Negative Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Metabolic Process
MiRNA-mediated Gene Silencing By Inhibition Of Translation
Regulation Of Gene Expression
Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Translation
MiRNA-mediated Gene Silencing By MRNA Destabilization
Regulation Of Macromolecule Metabolic Process
Extracellular Vesicle
Regulation Of Metabolic Process
Regulation Of Translation
MRNA Destabilization
RNA Destabilization
Positive Regulation Of MRNA Catabolic Process
Negative Regulation Of Developmental Process
Regulation Of MRNA Stability
Negative Regulation Of Protein Metabolic Process
Negative Regulation Of Cell Migration
Negative Regulation Of Cell Motility
Regulation Of RNA Stability
Negative Regulation Of Multicellular Organismal Process
Regulation Of MRNA Metabolic Process
Negative Regulation Of Locomotion
Negative Regulation Of Vascular Endothelial Growth Factor Production
Positive Regulation Of MRNA Metabolic Process
Negative Regulation Of Angiogenesis
Regulation Of Developmental Process
Negative Regulation Of Vasculature Development
Regulation Of Angiogenesis
Regulation Of Vasculature Development
Negative Regulation Of Cytokine Production
Regulation Of Blood Vessel Endothelial Cell Migration
Negative Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
Regulation Of Cell Migration
Regulation Of Cellular Response To Growth Factor Stimulus
Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
Regulation Of Locomotion
Regulation Of Cell Motility
Regulation Of Protein Metabolic Process
Cytoplasm
Modulation Of Chemical Synaptic Transmission
Regulation Of Cell Communication
Regulation Of Signaling
Regulation Of Protein Metabolic Process
Cytosol
Negative Regulation Of Protein Metabolic Process
Cytoplasmic Stress Granule
Synapse
Negative Regulation Of Macromolecule Metabolic Process
Regulation Of Translation At Presynapse, Modulating Synaptic Transmission
Perinuclear Region Of Cytoplasm
Negative Regulation Of Metabolic Process
Neuron Projection
Regulation Of Long-term Neuronal Synaptic Plasticity
Positive Regulation Of Cellular Component Organization
Positive Regulation Of Neurotrophin TRK Receptor Signaling Pathway
Negative Regulation Of Macromolecule Biosynthetic Process
Nucleus
Cytoplasmic Ribonucleoprotein Granule
Regulation Of Organelle Organization
Negative Regulation Of Biosynthetic Process
Cytoskeleton
Positive Regulation Of Long-term Neuronal Synaptic Plasticity
GMP Kinase Activity
Regulation Of Synaptic Plasticity
Regulation Of Circadian Rhythm
Regulation Of Macromolecule Metabolic Process
Dendrite Extension
Regulation Of Cellular Component Organization
Positive Regulation Of Cell Communication
Positive Regulation Of Signaling
Regulation Of Primary Metabolic Process
GDP Metabolic Process
SCAR Complex
Regulation Of Neurotrophin TRK Receptor Signaling Pathway
Regulation Of Protein Deacetylation
Microtubule-based Process
Regulation Of Signal Transduction
Postsynapse
Regulation Of Neuronal Synaptic Plasticity
Regulation Of Metabolic Process
RNA Splicing
Positive Regulation Of Organelle Organization
Transferase Complex
RNA 7-methylguanosine Cap Binding
Positive Regulation Of Cellular Component Biogenesis
Nuclear Body
Nucleoplasm
MRNA Binding
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