LIG1 and PRKCB

Number of citations of the paper that reports this interaction (PubMedID 30639225)
0

Data Source:
BioGRID (enzymatic study)

		LIG1	PRKCB
Description		DNA ligase 1	protein kinase C beta
Image
GO Annotations	Cellular Component	Nucleus Nucleoplasm	Nucleus Nucleoplasm Cytoplasm Cytosol Plasma Membrane Spectrin Membrane Calyx Of Held Extracellular Exosome Presynaptic Cytosol
	Molecular Function	Nucleotide Binding DNA Binding DNA Ligase Activity DNA Ligase (ATP) Activity Protein Binding ATP Binding Ligase Activity Metal Ion Binding	Nucleotide Binding Chromatin Binding Transcription Coactivator Activity Protein Kinase Activity Protein Serine/threonine Kinase Activity Diacylglycerol-dependent Serine/threonine Kinase Activity Calcium,diacylglycerol-dependent Serine/threonine Kinase Activity Protein Kinase C Binding Calcium Channel Regulator Activity Protein Binding ATP Binding Zinc Ion Binding Kinase Activity Transferase Activity Histone H3T6 Kinase Activity Histone Binding Metal Ion Binding Nuclear Androgen Receptor Binding Protein Serine Kinase Activity
	Biological Process	DNA Replication Lagging Strand Elongation DNA Repair Base-excision Repair Base-excision Repair, Gap-filling Mismatch Repair DNA Recombination DNA Damage Response Anatomical Structure Morphogenesis V(D)J Recombination Cell Division DNA Biosynthetic Process Okazaki Fragment Processing Involved In Mitotic DNA Replication	Adaptive Immune Response Immune System Process Chromatin Organization Chromatin Remodeling Regulation Of Transcription By RNA Polymerase II Protein Phosphorylation Calcium Ion Transport Intracellular Calcium Ion Homeostasis Apoptotic Process Mitotic Nuclear Membrane Disassembly Signal Transduction Phospholipase C-activating G Protein-coupled Acetylcholine Receptor Signaling Pathway Regulation Of D-glucose Transmembrane Transport Negative Regulation Of D-glucose Transmembrane Transport Positive Regulation Of Vascular Endothelial Growth Factor Receptor Signaling Pathway Positive Regulation Of Insulin Secretion Intracellular Signal Transduction B Cell Activation Lipoprotein Transport Positive Regulation Of Canonical NF-kappaB Signal Transduction Positive Regulation Of Angiogenesis Positive Regulation Of DNA-templated Transcription Negative Regulation Of Insulin Receptor Signaling Pathway B Cell Receptor Signaling Pathway Regulation Of Transport Protein Kinase C Signaling Cellular Response To Carbohydrate Stimulus Presynaptic Modulation Of Chemical Synaptic Transmission Regulation Of Synaptic Vesicle Exocytosis
Pathways		POLB-Dependent Long Patch Base Excision Repair Early Phase of HIV Life Cycle Processive synthesis on the C-strand of the telomere Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha) Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta) PCNA-Dependent Long Patch Base Excision Repair Gap-filling DNA repair synthesis and ligation in GG-NER Gap-filling DNA repair synthesis and ligation in TC-NER Processive synthesis on the lagging strand Regulation of MITF-M-dependent genes involved in DNA replication, damage repair and senescence	Disinhibition of SNARE formation Activation of NF-kappaB in B cells Trafficking of GluR2-containing AMPA receptors G alpha (z) signalling events Depolymerization of the Nuclear Lamina WNT5A-dependent internalization of FZD4 VEGFR2 mediated cell proliferation RHO GTPases Activate NADPH Oxidases Response to elevated platelet cytosolic Ca2+ RUNX1 regulates transcription of genes involved in differentiation of myeloid cells
Drugs		Bleomycin	Vitamin E Tamoxifen Phosphorylcolamine Staurosporine Dequalinium Enzastaurin Ellagic acid Cholecystokinin Benzoyl peroxide alpha-Tocopherol succinate D-alpha-Tocopherol acetate
Diseases		DNA repair defects, including the following six diseases: Ataxia telangiectasia (AT); Ataxia-talangiectasia-like syndrome; Nijmegen syndrome; DNA ligase I deficiency; DNA ligase IV deficiency; Bloom's syndrome
GWAS			Blood protein levels ( 30072576) Bone mineral content ( 31790847) Cadmium levels ( 26025379) Chronic inflammatory diseases (ankylosing spondylitis, Crohn's disease, psoriasis, primary sclerosing cholangitis, ulcerative colitis) (pleiotropy) ( 26974007) Daytime nap ( 33568662) Gut microbiota relative abundance (Dorea) ( 33208821) Inflammatory bowel disease ( 23128233 28067908) Lymphocyte count ( 32888494) Post bronchodilator FEV1/FVC ratio in COPD ( 26634245) Primary biliary cholangitis ( 28062665) Sleep duration ( 30531941) Systemic lupus erythematosus ( 33272962) Ulcerative colitis ( 28067908)
Interacting Genes		20 interacting genes: CBX3 CDY1 CDYL CDYL2 CEBPA CSNK2A1 DCAF7 EHMT1 EHMT2 HSPB1 INPP1 L3MBTL3 MIER1 MRE11 PCNA PHF20 PRKCB RGS2 TUBB3 UHRF1	88 interacting genes: ACSL4 AFAP1 ANXA2 ANXA7 BLVRA BMPR2 BTK CARD11 CASR CD5 CHAT CHUK CISH CSF2RB CYTH2 DAB2 DVL2 EGFR EIF4E EIF6 EP300 EPB41 FBXO7 GABRB2 GABRG2 GAP43 GCNT1 GJA1 GNA12 GNA13 GRIN1 GRIN2B GRIN2D GRK2 GRM5 GSK3A GSK3B H1-0 H1-1 H1-5 H3C1 HABP4 HSPA4 IBTK IFNAR2 IKBKB IKBKG ITGB2 ITGB7 KIT LIG1 LMNB1 LST1 MAPK6 MAPT MARCKS MBP MKI67 NCF1 NRGN NUMB PA2G4 PDLIM5 PDLIM7 PDPK1 PEBP1 PPP1CA PPP2CB PTPA PTPN11 RACK1 RASGRP3 RB1 RGS2 RIPK4 RRAD SDC2 SPTAN1 STXBP1 SYT6 TERF1 TIAM1 TINF2 TOP2A TRIM41 VTN YWHAG ZMYND8
Entrez ID		3978	5579
HPRD ID		00534	01499
Ensembl ID		ENSG00000105486	ENSG00000166501
Uniprot IDs		A0A8V8TPH8 A0A8V8TQC4 B4DM52 F5GZ28 P18858	P05771
PDB IDs		1X9N 5YY9 6P09 6P0A 6P0B 6P0C 6P0D 6P0E 6Q1V 7KR3 7KR4 7L34 7L35 7QNZ 7QO1 7SUM 7SX5 7SXE 8B8T 8VDN 8VDS 8VDT 8VZL 8VZM 9BS3 9BS4	2I0E 8SG2
Enriched GO Terms of Interacting Partners?		Chromatin Organization Negative Regulation Of Nucleobase-containing Compound Metabolic Process Chromatin Remodeling Negative Regulation Of DNA-templated Transcription Negative Regulation Of Macromolecule Metabolic Process Negative Regulation Of RNA Biosynthetic Process Negative Regulation Of Macromolecule Biosynthetic Process Negative Regulation Of RNA Metabolic Process Nucleus Negative Regulation Of Metabolic Process Negative Regulation Of Biosynthetic Process Regulation Of Primary Metabolic Process Heterochromatin Formation Regulation Of Nucleobase-containing Compound Metabolic Process Regulation Of DNA-templated Transcription Regulation Of RNA Biosynthetic Process Histone H3K9me2/3 Reader Activity Negative Regulation Of Gene Expression, Epigenetic Regulation Of Macromolecule Metabolic Process Regulation Of Gene Expression Regulation Of RNA Metabolic Process Regulation Of Macromolecule Biosynthetic Process Replication Fork Regulation Of Metabolic Process Chromatin Binding Peptidyl-lysine Dimethylation Epigenetic Regulation Of Gene Expression Response To Dexamethasone Histone H3K27 Methyltransferase Activity Histone H3K9me2 Methyltransferase Activity Histone H3K27me3 Reader Activity Histone H3K9 Methyltransferase Activity Nucleoplasm Identical Protein Binding Transcription Corepressor Activity C2H2 Zinc Finger Domain Binding Negative Regulation Of Gene Expression Via Chromosomal CpG Island Methylation Peptidyl-lysine Methylation Negative Regulation Of Gene Expression DNA Strand Elongation Histone H3 Methyltransferase Activity Protein-lysine N-methyltransferase Activity Nuclear Matrix Response To Glucocorticoid Double-strand Break Repair Via Homologous Recombination Brown Fat Cell Differentiation Granulocyte Differentiation Recombinational Repair Negative Regulation Of Transcription By RNA Polymerase II Response To Corticosteroid	Regulation Of Signaling Regulation Of Cellular Component Organization Regulation Of Cell Communication Regulation Of Signal Transduction Positive Regulation Of Signaling Intracellular Signaling Cassette Positive Regulation Of Cell Communication Regulation Of Developmental Process Cytoplasm Plasma Membrane Regulation Of Multicellular Organismal Process Positive Regulation Of Signal Transduction Regulation Of Biological Quality Developmental Process Regulation Of Postsynaptic Membrane Potential Regulation Of Synaptic Plasticity Regulation Of Intracellular Signal Transduction Positive Regulation Of DNA-binding Transcription Factor Activity Positive Regulation Of Cellular Component Organization Focal Adhesion Regulation Of Cell Projection Organization Postsynapse Regulation Of Membrane Potential Cellular Response To Oxygen-containing Compound Protein Kinase Binding Intracellular Signal Transduction Positive Regulation Of Multicellular Organismal Process Regulation Of Cell Differentiation Cytosol Regulation Of Protein Localization Calmodulin Binding Positive Regulation Of Transport Regulation Of Transport Regulation Of System Process Regulation Of Cell Growth Regulation Of Plasma Membrane Bounded Cell Projection Organization Cell Surface Receptor Signaling Pathway Regulation Of Protein Metabolic Process Regulation Of Protein-containing Complex Assembly Neuronal Cell Body Signal Transduction Positive Regulation Of NF-kappaB Transcription Factor Activity Phospholipase Binding Positive Regulation Of Intracellular Signal Transduction Regulation Of Cell Development Regulation Of DNA-binding Transcription Factor Activity IkappaB Kinase Complex Cellular Response To Interleukin-3 NMDA Glutamate Receptor Activity Glutamate Binding
Tagcloud ?
Tagcloud (Difference) ?
Tagcloud (Intersection) ?