LDLR and APOE

Number of citations of the paper that reports this interaction (PMID 12036962)
3

Data Source:
HPRD (in vivo, in vitro)

		LDLR	APOE
Gene Name		low density lipoprotein receptor	apolipoprotein E
Image
Gene Ontology Annotations	Cellular Component	Lysosome Early Endosome Late Endosome Golgi Apparatus Plasma Membrane Integral Component Of Plasma Membrane Coated Pit External Side Of Plasma Membrane Cell Surface Endosome Membrane Membrane Clathrin-coated Endocytic Vesicle Membrane Low-density Lipoprotein Particle Receptor Complex	Extracellular Region Extracellular Space Nucleus Nuclear Envelope Cytoplasm Lysosome Early Endosome Late Endosome Endoplasmic Reticulum Golgi Apparatus Microtubule Plasma Membrane Membrane Dendrite Extracellular Matrix Extrinsic Component Of External Side Of Plasma Membrane Vesicle Very-low-density Lipoprotein Particle Low-density Lipoprotein Particle Intermediate-density Lipoprotein Particle High-density Lipoprotein Particle Discoidal High-density Lipoprotein Particle Chylomicron Neuronal Cell Body Extracellular Vesicular Exosome Endocytic Vesicle Lumen Blood Microparticle
	Molecular Function	Glycoprotein Binding Low-density Lipoprotein Receptor Activity Calcium Ion Binding Protein Binding Low-density Lipoprotein Particle Binding Very-low-density Lipoprotein Particle Receptor Activity Clathrin Heavy Chain Binding	Beta-amyloid Binding Lipid Transporter Activity Protein Binding Phospholipid Binding Heparin Binding Lipid Binding Cholesterol Binding Antioxidant Activity Cholesterol Transporter Activity Identical Protein Binding Protein Homodimerization Activity Hydroxyapatite Binding Metal Chelating Activity Tau Protein Binding Low-density Lipoprotein Particle Receptor Binding Phosphatidylcholine-sterol O-acyltransferase Activator Activity Very-low-density Lipoprotein Particle Receptor Binding Lipoprotein Particle Binding
	Biological Process	Retinoid Metabolic Process Lipid Metabolic Process Endocytosis Receptor-mediated Endocytosis Phototransduction, Visible Light Cholesterol Metabolic Process Positive Regulation Of Triglyceride Biosynthetic Process Regulation Of Phosphatidylcholine Catabolic Process Phospholipid Transport Viral Process Intestinal Cholesterol Absorption Cholesterol Transport Low-density Lipoprotein Particle Clearance Lipoprotein Metabolic Process Lipoprotein Catabolic Process Cholesterol Homeostasis Small Molecule Metabolic Process Cholesterol Import Regulation Of Cholesterol Homeostasis	Response To Reactive Oxygen Species Retinoid Metabolic Process Negative Regulation Of Endothelial Cell Proliferation Response To Dietary Excess Triglyceride Metabolic Process Cholesterol Catabolic Process Cellular Calcium Ion Homeostasis Receptor-mediated Endocytosis Cytoskeleton Organization G-protein Coupled Receptor Signaling Pathway Nitric Oxide Mediated Signal Transduction Synaptic Transmission, Cholinergic Aging Phototransduction, Visible Light Cholesterol Metabolic Process Regulation Of Gene Expression Negative Regulation Of Platelet Activation Positive Regulation Of Cholesterol Esterification Positive Regulation Of Cholesterol Efflux Peripheral Nervous System Axon Regeneration Long-chain Fatty Acid Transport Protein Import Triglyceride Catabolic Process CGMP-mediated Signaling Negative Regulation Of Blood Coagulation Regulation Of Axon Extension Positive Regulation Of CGMP Biosynthetic Process Neuron Projection Regeneration Regulation Of Cdc42 Protein Signal Transduction Response To Retinoic Acid Positive Regulation Of Low-density Lipoprotein Particle Receptor Catabolic Process Response To Insulin Cholesterol Efflux Phospholipid Efflux Very-low-density Lipoprotein Particle Remodeling Low-density Lipoprotein Particle Remodeling High-density Lipoprotein Particle Remodeling High-density Lipoprotein Particle Assembly Chylomicron Remnant Clearance High-density Lipoprotein Particle Clearance Very-low-density Lipoprotein Particle Clearance Lipoprotein Metabolic Process Lipoprotein Biosynthetic Process Lipoprotein Catabolic Process Vasodilation Cholesterol Homeostasis Negative Regulation Of MAP Kinase Activity Negative Regulation Of Neuron Apoptotic Process Negative Regulation Of Blood Vessel Endothelial Cell Migration Reverse Cholesterol Transport Small Molecule Metabolic Process Response To Ethanol Negative Regulation Of Cholesterol Biosynthetic Process Positive Regulation Of Axon Extension Positive Regulation Of Lipid Biosynthetic Process Intracellular Transport Regulation Of Neuronal Synaptic Plasticity Oligodendrocyte Differentiation Artery Morphogenesis Negative Regulation Of Inflammatory Response Positive Regulation Of Nitric-oxide Synthase Activity Positive Regulation Of Membrane Protein Ectodomain Proteolysis Negative Regulation Of Lipid Biosynthetic Process Maintenance Of Location In Cell Fatty Acid Homeostasis Positive Regulation Of Dendritic Spine Development Negative Regulation Of Dendritic Spine Development Cellular Response To Interleukin-1 Cellular Response To Growth Factor Stimulus Cellular Response To Cholesterol Negative Regulation Of Cholesterol Efflux Alpha-amino-3-hydroxy-5-methyl-4-isoxazole Propionate Selective Glutamate Receptor Clustering N-methyl-D-aspartate Receptor Clustering Regulation Of Beta-amyloid Clearance Regulation Of Neuron Death Negative Regulation Of Neuron Death Positive Regulation Of Neuron Death Negative Regulation Of Postsynaptic Membrane Organization Positive Regulation Of Postsynaptic Membrane Organization Negative Regulation Of Presynaptic Membrane Organization Positive Regulation Of Presynaptic Membrane Organization Positive Regulation Of Beta-amyloid Formation Negative Regulation Of Beta-amyloid Formation Regulation Of Tau-protein Kinase Activity Negative Regulation Of Dendritic Spine Maintenance Positive Regulation Of Dendritic Spine Maintenance Positive Regulation Of Phospholipid Efflux Positive Regulation Of Neurofibrillary Tangle Assembly Negative Regulation Of Phospholipid Efflux Negative Regulation Of Lipid Transport Across Blood Brain Barrier Positive Regulation Of Lipid Transport Across Blood Brain Barrier
Pathways		Lipoprotein metabolism LDL-mediated lipid transport Visual phototransduction Metabolism of lipids and lipoproteins Chylomicron-mediated lipid transport Lipid digestion, mobilization, and transport Diseases associated with visual transduction Retinoid metabolism and transport	Lipoprotein metabolism Metabolism of lipids and lipoproteins Chylomicron-mediated lipid transport Lipid digestion, mobilization, and transport Diseases associated with visual transduction HDL-mediated lipid transport Visual phototransduction Scavenging by Class A Receptors Retinoid metabolism and transport
Drugs		Porfimer Alpha-D-Mannose	Human Serum Albumin Serum albumin iodonated
Diseases
GWAS		Cardiovascular disease risk factors ( 21943158) Carotid intima media thickness ( 21909108) Cholesterol, total ( 19060911 20686565) Coronary heart disease ( 21378990) LDL cholesterol ( 23726366 18193043 18193044 20864672 19060906 19060910 19060911 20686565) Lipid metabolism phenotypes ( 22286219 19936222) Lipoprotein-associated phospholipase A2 activity and mass ( 22003152) Metabolite levels ( 21909109 22916037) Myocardial infarction (early onset) ( 19198609)	Age-related macular degeneration ( 23326517 23455636) Alzheimer's disease ( 17975299 22832961 20460622 17998437 18823527 19734902 19734903 21627779 19125160 20061627 22245343) Alzheimer's disease (age of onset) ( 22005931) Alzheimer's disease (late onset) ( 17474819 20885792 23565137) Alzheimer's disease biomarkers ( 23562540 21123754 23419831) Apolipoprotein Levels ( 23031429) Brain imaging ( 20100581) C-reactive protein ( 19567438 18439548 18439552) Cardiovascular disease risk factors ( 20838585) Cholesterol, total ( 19060911 20686565) Cognitive decline ( 22054870) HDL cholesterol ( 21909109 19060911 20686565) Hippocampal atrophy ( 22745009) LDL cholesterol ( 23726366 18802019 18193043 18193044 20864672 19060906 19060911 23067351 20686565) Lipid metabolism phenotypes ( 22286219) Lipoprotein-associated phospholipase A2 activity and mass ( 23118302) Longevity ( 21418511) Metabolic syndrome ( 22399527) Metabolite levels ( 22916037) Quantitative traits ( 19197348) Response to statin therapy (LDL-C) ( 22331829) Triglycerides ( 19060911 20686565)
Protein-Protein Interactions		15 interactors: AP1M2 APOB APOE CD36 CREBBP DAB1 DAB2 HSPA5 LDLRAP1 LRPAP1 MAP4 MYLIP PCSK9 PF4 SNX17	54 interactors: A2M ACTG1 ALB ANKH APP ARFGAP1 C19orf52 CDC37 CNTF CSNK2A1 CTSB CYP2C18 CYP2C8 ECSIT ELAVL1 EPN2 FARSA FBXL12 FOXG1 FXYD7 GCDH HTRA1 IFIT3 IFIT5 IQSEC1 LCAT LDLR LONP1 LOXL4 LRP1 LRP2 LRP8 MAP2 MAPT MAST1 MID1IP1 NEFM NOS3 PCMT1 PDCD4 PLEKHA6 PLTP PRAM1 PRDX2 PRNP PSEN1 RHEB RNF32 RPL4 SCARB1 ST13 TYRO3 VLDLR ZNF558
Entrez ID		3949	348
HPRD ID		06091	00135
Ensembl ID		ENSG00000130164	ENSG00000130203
Uniprot IDs		P01130	P02649
PDB IDs		1AJJ 1D2J 1F5Y 1F8Z 1HJ7 1HZ8 1I0U 1IJQ 1LDL 1LDR 1LRX 1N7D 1XFE 2FCW 2KRI 2LGP 2M7P 2W2M 2W2N 2W2O 2W2P 2W2Q 3BPS 3GCW 3GCX 3M0C 3P5B 3P5C 3SO6	1B68 1BZ4 1EA8 1GS9 1H7I 1LE2 1LE4 1LPE 1NFN 1NFO 1OEF 1OEG 1OR2 1OR3 2KC3 2KNY 2L7B
Enriched GO Terms of Interacting Partners?		Regulation Of Low-density Lipoprotein Particle Receptor Catabolic Process Receptor-mediated Endocytosis Cholesterol Homeostasis Sterol Homeostasis Vesicle-mediated Transport Plasma Lipoprotein Particle Clearance Lipid Homeostasis Cholesterol Metabolic Process Sterol Metabolic Process Regulation Of Plasma Lipoprotein Particle Levels Cholesterol Transport Sterol Transport Endocytosis Regulation Of Endocytosis Low-density Lipoprotein Particle Clearance Cellular Localization Steroid Metabolic Process Positive Regulation Of Endocytosis Cerebellum Structural Organization Positive Regulation Of Macrophage Derived Foam Cell Differentiation Establishment Of Localization In Cell Regulation Of Signal Transduction Regulation Of Cholesterol Metabolic Process Positive Regulation Of Receptor-mediated Endocytosis Alcohol Metabolic Process Regulation Of Macrophage Derived Foam Cell Differentiation Regulation Of Signaling Regulation Of Vesicle-mediated Transport Negative Regulation Of Signaling Positive Regulation Of Metabolic Process Lipid Metabolic Process Negative Regulation Of Low-density Lipoprotein Particle Clearance Regulation Of Beta-amyloid Clearance Positive Regulation Of Cell Differentiation Platelet Degranulation Regulation Of Low-density Lipoprotein Particle Clearance CGMP-mediated Signaling Cholesterol Catabolic Process Low-density Lipoprotein Particle Remodeling Transport Regulation Of Cell Differentiation Protein Catabolic Process Positive Regulation Of Cholesterol Storage Lipid Transport Triglyceride Metabolic Process Regulation Of Steroid Metabolic Process Negative Regulation Of Signal Transduction Lipoprotein Transport Lipid Localization Neutral Lipid Metabolic Process	Endocytosis Steroid Metabolic Process Vesicle-mediated Transport Cholesterol Metabolic Process Lipid Metabolic Process Sterol Metabolic Process Receptor-mediated Endocytosis Developmental Process Response To External Stimulus Smooth Endoplasmic Reticulum Calcium Ion Homeostasis Alcohol Metabolic Process Locomotion Movement Of Cell Or Subcellular Component Regulation Of Plasma Lipoprotein Particle Levels Regulation Of Catalytic Activity Negative Regulation Of Apoptotic Process Cholesterol Import Regulation Of Phosphatidylcholine Catabolic Process Negative Regulation Of Programmed Cell Death Anatomical Structure Morphogenesis Cellular Response To Stimulus Multicellular Organismal Development Phototransduction, Visible Light Blood Coagulation Retinoid Metabolic Process Negative Regulation Of Cell Death Hemostasis Regulation Of Cellular Protein Metabolic Process Wound Healing Negative Regulation Of Neuron Apoptotic Process Lipoprotein Metabolic Process System Development Diterpenoid Metabolic Process Regulation Of Phosphorus Metabolic Process Anatomical Structure Development Lipid Transport Detection Of Visible Light Nervous System Development Apoptotic Cell Clearance Transport Phototransduction Small Molecule Metabolic Process Platelet Activation Lipid Localization Generation Of Neurons Plasma Lipoprotein Particle Clearance Negative Regulation Of Neuron Death Detection Of Light Stimulus Response To Wounding Reelin-mediated Signaling Pathway
Tagcloud ?		atresia atretic chicken cloning clusterin correlating follicle follicles granulosa heterodimer hitherto internalize intracellularly intriguing lr8 megalin migrates oocyte oocytes polyacrylamide postovulatory prime sac situations successors thereof uncovered vitellogenesis yolk	aa adenovirus agreement amyloid amyloids apoe3 apoe4 apoj apolipoprotein apolipoproteins appear cerebral characterize deficient define deposition deposits fibril fibrillogenesis fibrils fragment greatest heterozygous injected lacking lipoproteins promoting restored utilized
Tagcloud (Difference) ?		atresia atretic chicken cloning clusterin correlating follicle follicles granulosa heterodimer hitherto internalize intracellularly intriguing lr8 megalin migrates oocyte oocytes polyacrylamide postovulatory prime sac situations successors thereof uncovered vitellogenesis yolk	aa adenovirus agreement amyloid amyloids apoe3 apoe4 apoj apolipoprotein apolipoproteins appear cerebral characterize deficient define deposition deposits fibril fibrillogenesis fibrils fragment greatest heterozygous injected lacking lipoproteins promoting restored utilized
Tagcloud (Intersection) ?