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HMGB2 and HMGA1
Number of citations of the paper that reports this interaction (PubMedID
18850631
)
0
Data Source:
BioGRID
(far western blotting)
HMGB2
HMGA1
Description
high mobility group box 2
high mobility group AT-hook 1
Image
No pdb structure
GO Annotations
Cellular Component
Chromatin
Condensed Chromosome
Extracellular Region
Extracellular Space
Nucleus
Nucleoplasm
Chromosome
Nucleolus
Cytoplasm
Protein-containing Complex
Perinuclear Region Of Cytoplasm
Chromatin
Nucleus
Nucleoplasm
Transcription Regulator Complex
Chromosome
Cytosol
Focal Adhesion
Nuclear Membrane
Senescence-associated Heterochromatin Focus
RNA Polymerase II Transcription Regulator Complex
Molecular Function
Four-way Junction DNA Binding
Transcription Cis-regulatory Region Binding
Cis-regulatory Region Sequence-specific DNA Binding
DNA Binding
Damaged DNA Binding
Double-stranded DNA Binding
Single-stranded DNA Binding
Transcription Coactivator Activity
RNA Binding
Protein Binding
Transcription Factor Binding
DNA Binding, Bending
Protein Domain Specific Binding
Chemoattractant Activity
Non-sequence-specific DNA Binding, Bending
RAGE Receptor Binding
Supercoiled DNA Binding
DNA-binding Transcription Factor Binding
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
Cis-regulatory Region Sequence-specific DNA Binding
Transcription Coregulator Binding
DNA Binding
Minor Groove Of Adenine-thymine-rich DNA Binding
Chromatin Binding
Transcription Coregulator Activity
Transcription Coactivator Activity
RNA Binding
DNA-(apurinic Or Apyrimidinic Site) Endonuclease Activity
Protein Binding
DNA Binding, Bending
Enzyme Binding
Structural Constituent Of Chromatin
Nuclear Retinoic Acid Receptor Binding
Peroxisome Proliferator Activated Receptor Binding
Nuclear Retinoid X Receptor Binding
5'-deoxyribose-5-phosphate Lyase Activity
Molecular Adaptor Activity
Molecular Function Activator Activity
Biological Process
Negative Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of Endothelial Cell Proliferation
Immune System Process
Inflammatory Response To Antigenic Stimulus
DNA Topological Change
Double-strand Break Repair Via Nonhomologous End Joining
DNA Recombination
Chromatin Organization
Nucleosome Assembly
Chromatin Remodeling
Regulation Of Transcription By RNA Polymerase II
Chemotaxis
Inflammatory Response
Spermatogenesis
Spermatid Nucleus Differentiation
Male Gonad Development
Extrinsic Apoptotic Signaling Pathway Via Death Domain Receptors
Positive Regulation Of Gene Expression
Negative Regulation Of Gene Expression
DNA Geometric Change
Response To Lipopolysaccharide
Positive Regulation Of Interferon-beta Production
V(D)J Recombination
Innate Immune Response
Positive Regulation Of Innate Immune Response
Positive Regulation Of Erythrocyte Differentiation
Positive Regulation Of Megakaryocyte Differentiation
Negative Regulation Of DNA-templated Transcription
Positive Regulation Of DNA-templated Transcription
Positive Regulation Of Transcription By RNA Polymerase II
Response To Steroid Hormone
Regulation Of Neurogenesis
Defense Response To Gram-negative Bacterium
Defense Response To Gram-positive Bacterium
Positive Chemotaxis
Cell Chemotaxis
Cellular Response To Lipopolysaccharide
Regulation Of Stem Cell Proliferation
Negative Regulation Of Extrinsic Apoptotic Signaling Pathway Via Death Domain Receptors
Regulation Of Hemopoiesis
Base-excision Repair
Nucleosome Disassembly
Regulation Of DNA-templated Transcription
Negative Regulation Of Cell Population Proliferation
Regulation Of Gene Expression
Positive Regulation Of Macromolecule Biosynthetic Process
Intracellular Signal Transduction
Negative Regulation Of DNA-templated Transcription
Positive Regulation Of DNA-templated Transcription
Positive Regulation Of Transcription By RNA Polymerase II
Oncogene-induced Cell Senescence
Pathways
Apoptosis induced DNA fragmentation
Integration of provirus
2-LTR circle formation
Integration of viral DNA into host genomic DNA
Autointegration results in viral DNA circles
APOBEC3G mediated resistance to HIV-1 infection
Vpr-mediated nuclear import of PICs
Formation of Senescence-Associated Heterochromatin Foci (SAHF)
Drugs
Diseases
GWAS
A body shape index (
34021172
)
Anthropometric traits (
30166351
)
Anthropometric traits (multi-trait analysis) (
30166351
)
Apolipoprotein A1 levels (
32203549
)
Appendicular lean mass (
33097823
)
Birth weight (
31043758
27680694
)
Body mass index (
20935630
28892062
26426971
)
Estimated glomerular filtration rate (
31152163
)
FEV1 (
30804560
)
Hand grip strength (
29691431
)
Height (
19343178
34054925
31562340
20881960
18391951
19396169
19893584
20189936
20397748
21998595
23563607
25282103
25429064
)
Hemoglobin levels (
32327693
)
Hip circumference adjusted for BMI (
25673412
34021172
)
Lung function (FVC) (
30804560
)
Lymphocyte count (
32888494
)
Mean corpuscular hemoglobin (
32888494
)
Mean corpuscular volume (
32888494
)
Mean reticulocyte volume (
32888494
)
Mean spheric corpuscular volume (
32888494
)
Metabolic syndrome (
31589552
)
Myeloproliferative neoplasms (
33057200
)
Offspring birth weight (
31043758
)
Plateletcrit (
32888494
)
Regular attendance at a gym or sports club (
29970889
)
Systolic blood pressure (
30578418
)
Tonsillectomy (
28928442
27182965
)
Triglyceride levels (
32203549
)
Type 2 diabetes (
32499647
)
Type 2 diabetes (adjusted for BMI) (
30297969
)
Uterine fibroids (
31649266
)
Waist circumference adjusted for BMI (adjusted for smoking behaviour) (
28443625
)
Waist circumference adjusted for BMI (joint analysis main effects and physical activity interaction) (
28448500
)
Waist circumference adjusted for BMI (joint analysis main effects and smoking interaction) (
28443625
)
Waist circumference adjusted for BMI in active individuals (
28448500
)
Waist circumference adjusted for BMI in non-smokers (
28443625
)
Waist circumference adjusted for body mass index (
28448500
28552196
34021172
25673412
)
Waist-hip index (
34021172
)
Waist-to-hip ratio adjusted for body mass index (
25673412
)
Weight (
34054925
)
Interacting Genes
54 interacting genes:
-
APEX1
APP
AR
ARCN1
BCCIP
C1QBP
CACTIN
CEBPA
CHAF1A
COMMD1
CRBN
CREBBP
CSNK1A1
EIF1
FBXO7
FLNA
GZMA
GZMK
H3-3A
HACD3
HDLBP
HMGA1
LZTS1
MIEN1
MYL6
NAP1L1
NCBP3
NEXN
NOP53
NR3C1
PCBP1
PGR
PKNOX1
POU2F1
POU2F2
POU3F1
POU5F1
PRKDC
RAG1
ROCK1
RPS28
SAMM50
SET
SNAPIN
TBC1D25
TP53
TSNAX
U2AF1
UHRF2
ZFR
ZNF428
ZNF622
ZNF668
71 interacting genes:
ANXA1
ANXA2
APEX1
APP
ATF2
ATM
CD274
CDK1
CEBPA
CEBPB
CREBBP
CSNK2A1
CSNK2A2
CWC27
DNAJC8
EIF2S2
ELF1
EPB41L2
EWSR1
GTF2F2
HEMGN
HIPK2
HMGB1
HMGB2
HMGB3
HNRNPA1
HNRNPAB
HNRNPD
HNRNPDL
HNRNPL
HPF1
HSPA1A
IRF1
JUN
KAT2B
MAPK1
METAP2
NCL
NFKB1
NFYA
NPM1
OLA1
ORC6
PA2G4
PCBP1
PCBP2
POU2F1
POU2F2
POU3F1
PPARG
PPP1R8
PRKCA
PRMT6
PSIP1
PTBP1
RARA
RARG
RBFOX2
RCC1
RN7SK
RNF4
RXRA
SP1
SRF
SRPK2
SSB
SUFU
SYNCRIP
TP53
UPF2
WEE2-AS1
Entrez ID
3148
3159
HPRD ID
01229
02829
Ensembl ID
ENSG00000164104
ENSG00000137309
Uniprot IDs
P26583
A0A994J434
P17096
Q5T6U8
PDB IDs
2EZD
2EZE
2EZF
2EZG
8CPG
Enriched GO Terms of Interacting Partners
?
Nucleus
RNA Binding
Nucleic Acid Metabolic Process
Regulation Of MiRNA Transcription
DNA Metabolic Process
Regulation Of MiRNA Metabolic Process
DNA Binding
Macromolecule Metabolic Process
Negative Regulation Of Metabolic Process
Chromatin
Sequence-specific DNA Binding
Regulation Of Metabolic Process
Nucleobase-containing Compound Metabolic Process
Negative Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Macromolecule Biosynthetic Process
DNA Repair
Transcription Coactivator Binding
Negative Regulation Of Biosynthetic Process
Positive Regulation Of MiRNA Transcription
Transcription Regulator Complex
Regulation Of Apoptotic Process
Chromatin Organization
Positive Regulation Of MiRNA Metabolic Process
Regulation Of Programmed Cell Death
Chromatin Binding
RNA Polymerase II-specific DNA-binding Transcription Factor Binding
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Negative Regulation Of Transcription By RNA Polymerase I
Regulation Of Macromolecule Metabolic Process
Regulation Of RNA Metabolic Process
Estrogen Response Element Binding
Regulation Of Gene Expression
Nucleoplasm
Cytoplasm
Chromatin Remodeling
Positive Regulation Of Transcription By RNA Polymerase II
Regulation Of Nucleobase-containing Compound Metabolic Process
Positive Regulation Of RNA Metabolic Process
Nuclear Speck
Negative Regulation Of DNA-templated Transcription
Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of RNA Biosynthetic Process
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
Positive Regulation Of RNA Biosynthetic Process
Positive Regulation Of DNA-templated Transcription
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Neuron Apoptotic Process
Regulation Of Protein Stability
Negative Regulation Of RNA Metabolic Process
Nucleoplasm
Nucleus
Regulation Of RNA Metabolic Process
Nucleic Acid Metabolic Process
Regulation Of Gene Expression
Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Macromolecule Biosynthetic Process
Positive Regulation Of Biosynthetic Process
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Positive Regulation Of Macromolecule Biosynthetic Process
Positive Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
Nucleobase-containing Compound Metabolic Process
Negative Regulation Of Macromolecule Metabolic Process
Positive Regulation Of RNA Biosynthetic Process
Positive Regulation Of DNA-templated Transcription
Negative Regulation Of Macromolecule Biosynthetic Process
Regulation Of Macromolecule Metabolic Process
Positive Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Biosynthetic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Primary Metabolic Process
Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of RNA Metabolic Process
Negative Regulation Of Metabolic Process
Positive Regulation Of Metabolic Process
Chromatin
Regulation Of Metabolic Process
RNA Metabolic Process
Negative Regulation Of RNA Metabolic Process
Positive Regulation Of Gene Expression
RNA Polymerase II Transcription Regulator Complex
DNA Binding
Chromatin Binding
MRNA Metabolic Process
Macromolecule Metabolic Process
Transcription Cis-regulatory Region Binding
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of RNA Biosynthetic Process
RNA Binding
Gland Development
Regulation Of Cell Population Proliferation
DNA-binding Transcription Factor Activity
DNA-binding Transcription Factor Binding
Regulation Of Programmed Cell Death
Negative Regulation Of Gene Expression
Sequence-specific DNA Binding
Chromatin Remodeling
Nucleic Acid Binding
Tagcloud
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Tagcloud (Difference)
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Tagcloud (Intersection)
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